RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 PARP4Q9UKK3 1724 aaKnown RBP25.96■■□□□ 1.75
DNMT3A-210ENST00000474807 DISP2A7MBM2 1401 aa25.95■■□□□ 1.74
DNMT3A-210ENST00000474807 A0A1W2PP64 1363 aa25.95■■□□□ 1.74
DNMT3A-210ENST00000474807 WDR17Q8IZU2 1322 aa25.94■■□□□ 1.74
DNMT3A-210ENST00000474807 SLC24A1O60721 1099 aa25.94■■□□□ 1.74
DNMT3A-210ENST00000474807 EN1Q05925 392 aaPredicted RBP25.94■■□□□ 1.74
DNMT3A-210ENST00000474807 TOM1L2Q6ZVM7 507 aa25.94■■□□□ 1.74
DNMT3A-210ENST00000474807 NME9Q86XW9 330 aa25.94■■□□□ 1.74
DNMT3A-210ENST00000474807 RGPD5Q99666 1765 aa25.93■■□□□ 1.74
DNMT3A-210ENST00000474807 TERF2IPQ9NYB0 399 aa25.93■■□□□ 1.74
DNMT3A-210ENST00000474807 EDC4Q6P2E9 1401 aaKnown RBP25.93■■□□□ 1.74
DNMT3A-210ENST00000474807 TRIM37O94972 964 aa25.92■■□□□ 1.74
DNMT3A-210ENST00000474807 ABCC6O95255 1503 aa25.9■■□□□ 1.74
DNMT3A-210ENST00000474807 NINLQ9Y2I6 1382 aa25.9■■□□□ 1.74
DNMT3A-210ENST00000474807 USP47Q96K76 1375 aa25.88■■□□□ 1.73
DNMT3A-210ENST00000474807 TIMELESSQ9UNS1 1208 aa25.88■■□□□ 1.73
DNMT3A-210ENST00000474807 LRRC37A3O60309 1634 aa25.88■■□□□ 1.73
DNMT3A-210ENST00000474807 WNK3Q9BYP7 1800 aa25.87■■□□□ 1.73
DNMT3A-210ENST00000474807 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
DNMT3A-210ENST00000474807 EZH2Q15910 746 aaKnown RBP25.86■■□□□ 1.73
DNMT3A-210ENST00000474807 CAMKK2Q96RR4 588 aa25.86■■□□□ 1.73
DNMT3A-210ENST00000474807 CARD10Q9BWT7 1032 aa25.86■■□□□ 1.73
DNMT3A-210ENST00000474807 OVOS2A0A0J9YW53 1432 aa25.86■■□□□ 1.73
DNMT3A-210ENST00000474807 OVOS2Q6IE36 1432 aa25.86■■□□□ 1.73
DNMT3A-210ENST00000474807 DDB1Q16531 1140 aa25.85■■□□□ 1.73
DNMT3A-210ENST00000474807 APBA3O96018 575 aa25.84■■□□□ 1.73
DNMT3A-210ENST00000474807 CSB-PGBD3P0DP91 1061 aa25.84■■□□□ 1.73
DNMT3A-210ENST00000474807 CDCA7Q9BWT1 371 aaPredicted RBP25.84■■□□□ 1.73
DNMT3A-210ENST00000474807 PCGF6Q9BYE7 350 aa25.84■■□□□ 1.73
DNMT3A-210ENST00000474807 PEAK1Q9H792 1746 aa25.84■■□□□ 1.73
DNMT3A-210ENST00000474807 LTN1O94822 1766 aa25.84■■□□□ 1.73
DNMT3A-210ENST00000474807 C11orf95C9JLR9 678 aaPredicted RBP25.83■■□□□ 1.73
DNMT3A-210ENST00000474807 OVOS2A0A0G2JMS6 1433 aa25.82■■□□□ 1.72
DNMT3A-210ENST00000474807 TMF1P82094 1093 aa25.82■■□□□ 1.72
DNMT3A-210ENST00000474807 PARD3Q8TEW0 1356 aa25.81■■□□□ 1.72
DNMT3A-210ENST00000474807 PSDA5PKW4 1024 aaPredicted RBP25.8■■□□□ 1.72
DNMT3A-210ENST00000474807 ERBB3P21860 1342 aa25.8■■□□□ 1.72
DNMT3A-210ENST00000474807 ANKRD36BQ8N2N9 1353 aa25.8■■□□□ 1.72
DNMT3A-210ENST00000474807 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
DNMT3A-210ENST00000474807 MARCH10Q8NA82 808 aaPredicted RBP25.77■■□□□ 1.72
DNMT3A-210ENST00000474807 SBF2Q86WG5 1849 aa25.77■■□□□ 1.72
DNMT3A-210ENST00000474807 RREB1Q92766 1687 aa25.76■■□□□ 1.71
DNMT3A-210ENST00000474807 BCL9O00512 1426 aa25.75■■□□□ 1.71
DNMT3A-210ENST00000474807 R3HDM1Q15032 1099 aaKnown RBP25.74■■□□□ 1.71
DNMT3A-210ENST00000474807 ANKRD24Q8TF21 1146 aa25.74■■□□□ 1.71
DNMT3A-210ENST00000474807 COG3Q96JB2 828 aa25.74■■□□□ 1.71
DNMT3A-210ENST00000474807 EXOC5O00471 708 aa25.73■■□□□ 1.71
DNMT3A-210ENST00000474807 CDCA8Q53HL2 280 aa25.73■■□□□ 1.71
DNMT3A-210ENST00000474807 IP6K1Q92551 441 aa25.72■■□□□ 1.71
DNMT3A-210ENST00000474807 NLRP2Q9NX02 1062 aa25.72■■□□□ 1.71
DNMT3A-210ENST00000474807 LRP5O75197 1615 aa25.72■■□□□ 1.71
DNMT3A-210ENST00000474807 NUP188Q5SRE5 1749 aa25.71■■□□□ 1.71
DNMT3A-210ENST00000474807 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
DNMT3A-210ENST00000474807 BCL11BQ9C0K0 894 aaPredicted RBP25.7■■□□□ 1.7
DNMT3A-210ENST00000474807 FYB1O15117 783 aa25.69■■□□□ 1.7
DNMT3A-210ENST00000474807 PTF1AQ7RTS3 328 aa25.69■■□□□ 1.7
DNMT3A-210ENST00000474807 MAP3K19Q56UN5 1328 aa25.68■■□□□ 1.7
DNMT3A-210ENST00000474807 PLSCR1O15162 318 aa25.68■■□□□ 1.7
DNMT3A-210ENST00000474807 FBLN1P23142 703 aa25.68■■□□□ 1.7
DNMT3A-210ENST00000474807 RGPD3A6NKT7 1758 aaPredicted RBP25.67■■□□□ 1.7
DNMT3A-210ENST00000474807 RGPD4Q7Z3J3 1758 aa25.67■■□□□ 1.7
DNMT3A-210ENST00000474807 IL2RBP14784 551 aa25.67■■□□□ 1.7
DNMT3A-210ENST00000474807 MYOM1P52179 1685 aa25.65■■□□□ 1.7
DNMT3A-210ENST00000474807 HOXC9P31274 260 aa25.65■■□□□ 1.7
DNMT3A-210ENST00000474807 GGNBP2Q9H3C7 697 aa25.65■■□□□ 1.7
DNMT3A-210ENST00000474807 FAM208AQ9UK61 1670 aaKnown RBP25.64■■□□□ 1.7
DNMT3A-210ENST00000474807 NBPF14Q5TI25 921 aa25.63■■□□□ 1.69
DNMT3A-210ENST00000474807 AMPHP49418 695 aa25.62■■□□□ 1.69
DNMT3A-210ENST00000474807 CCER1Q8TC90 406 aaPredicted RBP25.62■■□□□ 1.69
DNMT3A-210ENST00000474807 LTV1Q96GA3 475 aaPredicted RBP25.62■■□□□ 1.69
DNMT3A-210ENST00000474807 CARD14Q9BXL6 1004 aa25.62■■□□□ 1.69
DNMT3A-210ENST00000474807 KIF20BQ96Q89 1820 aa25.6■■□□□ 1.69
DNMT3A-210ENST00000474807 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
DNMT3A-210ENST00000474807 RRS1Q15050 365 aaKnown RBP25.6■■□□□ 1.69
DNMT3A-210ENST00000474807 PROM2Q8N271 834 aa25.59■■□□□ 1.69
DNMT3A-210ENST00000474807 KCNQ2O43526 872 aa25.58■■□□□ 1.69
DNMT3A-210ENST00000474807 NHSQ6T4R5 1651 aa25.58■■□□□ 1.68
DNMT3A-210ENST00000474807 NSD3Q9BZ95 1437 aa25.56■■□□□ 1.68
DNMT3A-210ENST00000474807 RGPD2P0DJD1 1756 aa25.56■■□□□ 1.68
DNMT3A-210ENST00000474807 ACSBG1Q96GR2 724 aa25.54■■□□□ 1.68
DNMT3A-210ENST00000474807 EIF4G2P78344 907 aaKnown RBP eCLIP25.53■■□□□ 1.68
DNMT3A-210ENST00000474807 TXNRD1Q16881 649 aa25.52■■□□□ 1.68
DNMT3A-210ENST00000474807 ANO8Q9HCE9 1232 aaPredicted RBP25.52■■□□□ 1.68
DNMT3A-210ENST00000474807 NBPF6Q5VWK0 638 aa25.51■■□□□ 1.67
DNMT3A-210ENST00000474807 NBPF4Q96M43 638 aa25.51■■□□□ 1.67
DNMT3A-210ENST00000474807 KIF24Q5T7B8 1368 aa25.51■■□□□ 1.67
DNMT3A-210ENST00000474807 INSRP06213 1382 aa25.5■■□□□ 1.67
DNMT3A-210ENST00000474807 HSPA5P11021 654 aaKnown RBP25.5■■□□□ 1.67
DNMT3A-210ENST00000474807 HSP90AB2PQ58FF8 381 aa25.5■■□□□ 1.67
DNMT3A-210ENST00000474807 MEGF6O75095 1541 aa25.49■■□□□ 1.67
DNMT3A-210ENST00000474807 FLT4P35916 1363 aa25.49■■□□□ 1.67
DNMT3A-210ENST00000474807 DDX54Q8TDD1 881 aaKnown RBP25.49■■□□□ 1.67
DNMT3A-210ENST00000474807 SMG6Q86US8 1419 aaKnown RBP25.48■■□□□ 1.67
DNMT3A-210ENST00000474807 BTAF1O14981 1849 aa25.47■■□□□ 1.67
DNMT3A-210ENST00000474807 SHANK3Q9BYB0 1731 aa25.47■■□□□ 1.67
DNMT3A-210ENST00000474807 ZCRB1Q8TBF4 217 aaKnown RBP25.46■■□□□ 1.67
DNMT3A-210ENST00000474807 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
DNMT3A-210ENST00000474807 CGNL1Q0VF96 1302 aa25.45■■□□□ 1.66
DNMT3A-210ENST00000474807 USHBP1Q8N6Y0 703 aa25.45■■□□□ 1.66
DNMT3A-210ENST00000474807 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms