RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 C11orf95C9JLR9 678 aaPredicted RBP5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 PLEKHG5O94827 1062 aa5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 NME9Q86XW9 330 aa5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 QTRT2Q9H974 415 aaKnown RBP5.65□□□□□ -1.5
GAPVD1-216ENST00000474637 NFAT5O94916 1531 aa5.65□□□□□ -1.51
GAPVD1-216ENST00000474637 CDK12Q9NYV4 1490 aaPredicted RBP5.65□□□□□ -1.51
GAPVD1-216ENST00000474637 NRAPQ86VF7 1730 aa5.65□□□□□ -1.51
GAPVD1-216ENST00000474637 NSD2O96028 1365 aa5.65□□□□□ -1.51
GAPVD1-216ENST00000474637 DCAF8L1A6NGE4 600 aa5.65□□□□□ -1.51
GAPVD1-216ENST00000474637 BCL9LQ86UU0 1499 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 ANKRD26Q9UPS8 1709 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 LMO7Q8WWI1 1683 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 AATKQ6ZMQ8 1374 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 RXRBP28702 533 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 ZC3H6P61129 1189 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 RBM6P78332 1123 aaKnown RBP5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 VPS72Q15906 364 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 PANK3Q9H999 370 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 FYB1O15117 783 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 POTEAQ6S8J7 498 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 CARD14Q9BXL6 1004 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 BTG4Q9NY30 223 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 KNSTRNQ9Y448 316 aa5.64□□□□□ -1.51
GAPVD1-216ENST00000474637 ARHGEF25Q86VW2 580 aa5.63□□□□□ -1.51
GAPVD1-216ENST00000474637 COL18A1P39060 1754 aa5.63□□□□□ -1.51
GAPVD1-216ENST00000474637 RTL1A6NKG5 1358 aa5.63□□□□□ -1.51
GAPVD1-216ENST00000474637 LTN1O94822 1766 aa5.63□□□□□ -1.51
GAPVD1-216ENST00000474637 EVA1CP58658 441 aa5.63□□□□□ -1.51
GAPVD1-216ENST00000474637 HNRNPUQ00839 825 aaKnown RBP eCLIP5.63□□□□□ -1.51
GAPVD1-216ENST00000474637 ZRANB1Q9UGI0 708 aa5.63□□□□□ -1.51
GAPVD1-216ENST00000474637 KIF24Q5T7B8 1368 aa5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 BLMP54132 1417 aaPredicted RBP5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 ZBTB7CA1YPR0 619 aa5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 NEFLP07196 543 aa5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 CHRNA2Q15822 529 aa5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 CCDC184Q52MB2 194 aa5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 GJD4Q96KN9 370 aaPredicted RBP5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 GGNBP2Q9H3C7 697 aa5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 CAMTA1Q9Y6Y1 1673 aa5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 THRAP3Q9Y2W1 955 aaKnown RBP5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 CCDC9Q9Y3X0 531 aaKnown RBP5.62□□□□□ -1.51
GAPVD1-216ENST00000474637 NPC1L1Q9UHC9 1359 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 COL5A2P05997 1499 aaPredicted RBP5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 SPATA31A5Q5VU36 1347 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 SPATA31A7Q8IWB4 1347 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 FAM208AQ9UK61 1670 aaKnown RBP5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 SOX12O15370 315 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 IP6K1Q92551 441 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 STRN4Q9NRL3 753 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 GLI3P10071 1580 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 CRB1P82279 1406 aa5.61□□□□□ -1.51
GAPVD1-216ENST00000474637 AMPHP49418 695 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 SPATA31A1Q5TZJ5 1347 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 WDR17Q8IZU2 1322 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 RGPD5Q99666 1765 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 ONECUT3O60422 494 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 MORC1Q86VD1 984 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 FAM9BQ8IZU0 186 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 PRKRIP1Q9H875 184 aaPredicted RBP5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 RGS12O14924 1447 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 SMG6Q86US8 1419 aaKnown RBP5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 MAP3K19Q56UN5 1328 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 FLT4P35916 1363 aa5.6□□□□□ -1.51
GAPVD1-216ENST00000474637 PER1O15534 1290 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 CSB-PGBD3P0DP91 1061 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 HOXC9P31274 260 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 CNGB1Q14028 1251 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 AMER1Q5JTC6 1135 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 BARGINQ6ZT62 677 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 ILDR2Q71H61 639 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 TCP11L2Q8N4U5 519 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 CDCA7Q9BWT1 371 aaPredicted RBP5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 LARP1Q6PKG0 1096 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 TOM1L2Q6ZVM7 507 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 ANKRD24Q8TF21 1146 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 CARD10Q9BWT7 1032 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 AXIN2Q9Y2T1 843 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 RBM19Q9Y4C8 960 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 THSD7AQ9UPZ6 1657 aa5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 MAP2P11137 1827 aaKnown RBP5.59□□□□□ -1.51
GAPVD1-216ENST00000474637 INSRP06213 1382 aa5.59□□□□□ -1.52
GAPVD1-216ENST00000474637 WNK3Q9BYP7 1800 aa5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 ERBB3P21860 1342 aa5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 IRX6P78412 446 aaPredicted RBP5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 RRS1Q15050 365 aaKnown RBP5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 SEPT12Q8IYM1 358 aa5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 MRS2Q9HD23 443 aa5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 PEAK1Q9H792 1746 aa5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 PARP4Q9UKK3 1724 aaKnown RBP5.58□□□□□ -1.52
GAPVD1-216ENST00000474637 FAM98CQ17RN3 349 aaKnown RBP5.57□□□□□ -1.52
GAPVD1-216ENST00000474637 A0A0G2JS52 829 aa5.57□□□□□ -1.52
GAPVD1-216ENST00000474637 SOCS7O14512 581 aa5.57□□□□□ -1.52
GAPVD1-216ENST00000474637 NLRP2Q9NX02 1062 aa5.57□□□□□ -1.52
GAPVD1-216ENST00000474637 POLKQ9UBT6 870 aa5.57□□□□□ -1.52
GAPVD1-216ENST00000474637 CC2D1BQ5T0F9 858 aaKnown RBP5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 POTEHQ6S545 545 aa5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 KRT27Q7Z3Y8 459 aa5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 USP35Q9P2H5 1018 aa5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 EMILIN1Q9Y6C2 1016 aa5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 BRWD3Q6RI45 1802 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms