RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
COL16A1-210ENST00000474000 WDR17Q8IZU2 1322 aa17.09■□□□□ 0.33
COL16A1-210ENST00000474000 PARP4Q9UKK3 1724 aaKnown RBP17.08■□□□□ 0.32
COL16A1-210ENST00000474000 PLSCR1O15162 318 aa17.08■□□□□ 0.32
COL16A1-210ENST00000474000 YY1P25490 414 aa17.08■□□□□ 0.32
COL16A1-210ENST00000474000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL16A1-210ENST00000474000 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-210ENST00000474000 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
COL16A1-210ENST00000474000 OVOS2A0A0J9YW53 1432 aa17.07■□□□□ 0.32
COL16A1-210ENST00000474000 OVOS2Q6IE36 1432 aa17.07■□□□□ 0.32
COL16A1-210ENST00000474000 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
COL16A1-210ENST00000474000 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
COL16A1-210ENST00000474000 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-210ENST00000474000 SBNO2Q9Y2G9 1366 aa17.06■□□□□ 0.32
COL16A1-210ENST00000474000 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
COL16A1-210ENST00000474000 SLC12A5Q9H2X9 1139 aa17.06■□□□□ 0.32
COL16A1-210ENST00000474000 TONSLQ96HA7 1378 aa17.05■□□□□ 0.32
COL16A1-210ENST00000474000 PROM2Q8N271 834 aa17.05■□□□□ 0.32
COL16A1-210ENST00000474000 MARCH10Q8NA82 808 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-210ENST00000474000 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-210ENST00000474000 ANO8Q9HCE9 1232 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-210ENST00000474000 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
COL16A1-210ENST00000474000 NME9Q86XW9 330 aa17.04■□□□□ 0.32
COL16A1-210ENST00000474000 PIK3C2AO00443 1686 aa17.04■□□□□ 0.32
COL16A1-210ENST00000474000 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-210ENST00000474000 PDGFDQ9GZP0 370 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-210ENST00000474000 EXOC5O00471 708 aa17.02■□□□□ 0.32
COL16A1-210ENST00000474000 COL18A1P39060 1754 aa17.02■□□□□ 0.31
COL16A1-210ENST00000474000 USP31Q70CQ4 1352 aa17.02■□□□□ 0.31
COL16A1-210ENST00000474000 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
COL16A1-210ENST00000474000 PUS7Q96PZ0 661 aaKnown RBP17.01■□□□□ 0.31
COL16A1-210ENST00000474000 TERF2IPQ9NYB0 399 aa17.01■□□□□ 0.31
COL16A1-210ENST00000474000 SBF2Q86WG5 1849 aa17■□□□□ 0.31
COL16A1-210ENST00000474000 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
COL16A1-210ENST00000474000 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
COL16A1-210ENST00000474000 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
COL16A1-210ENST00000474000 ZBTB7AO95365 584 aa16.99■□□□□ 0.31
COL16A1-210ENST00000474000 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
COL16A1-210ENST00000474000 TESK2Q96S53 571 aa16.98■□□□□ 0.31
COL16A1-210ENST00000474000 NLRP2Q9NX02 1062 aa16.98■□□□□ 0.31
COL16A1-210ENST00000474000 CCDC7Q96M83 1385 aa16.98■□□□□ 0.31
COL16A1-210ENST00000474000 NFAT5O94916 1531 aa16.97■□□□□ 0.31
COL16A1-210ENST00000474000 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
COL16A1-210ENST00000474000 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-210ENST00000474000 BCL9O00512 1426 aa16.96■□□□□ 0.31
COL16A1-210ENST00000474000 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-210ENST00000474000 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
COL16A1-210ENST00000474000 ERBB3P21860 1342 aa16.96■□□□□ 0.3
COL16A1-210ENST00000474000 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
COL16A1-210ENST00000474000 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
COL16A1-210ENST00000474000 PTGER2P43116 358 aa16.95■□□□□ 0.3
COL16A1-210ENST00000474000 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
COL16A1-210ENST00000474000 EDC4Q6P2E9 1401 aaKnown RBP16.95■□□□□ 0.3
COL16A1-210ENST00000474000 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
COL16A1-210ENST00000474000 RGPD5Q99666 1765 aa16.94■□□□□ 0.3
COL16A1-210ENST00000474000 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
COL16A1-210ENST00000474000 SLC15A2Q16348 729 aa16.94■□□□□ 0.3
COL16A1-210ENST00000474000 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
COL16A1-210ENST00000474000 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
COL16A1-210ENST00000474000 IL2RBP14784 551 aa16.93■□□□□ 0.3
COL16A1-210ENST00000474000 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
COL16A1-210ENST00000474000 ACSBG1Q96GR2 724 aa16.92■□□□□ 0.3
COL16A1-210ENST00000474000 UTRNP46939 3433 aa16.91■□□□□ 0.3
COL16A1-210ENST00000474000 IP6K1Q92551 441 aa16.91■□□□□ 0.3
COL16A1-210ENST00000474000 ABCC6O95255 1503 aa16.91■□□□□ 0.3
COL16A1-210ENST00000474000 COG3Q96JB2 828 aa16.9■□□□□ 0.3
COL16A1-210ENST00000474000 FBLN1P23142 703 aa16.89■□□□□ 0.29
COL16A1-210ENST00000474000 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-210ENST00000474000 SYT17Q9BSW7 474 aa16.89■□□□□ 0.29
COL16A1-210ENST00000474000 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-210ENST00000474000 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
COL16A1-210ENST00000474000 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
COL16A1-210ENST00000474000 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
COL16A1-210ENST00000474000 MTFR1LQ9H019 292 aa16.88■□□□□ 0.29
COL16A1-210ENST00000474000 MYOM1P52179 1685 aa16.88■□□□□ 0.29
COL16A1-210ENST00000474000 TMF1P82094 1093 aa16.86■□□□□ 0.29
COL16A1-210ENST00000474000 MAP3K19Q56UN5 1328 aa16.86■□□□□ 0.29
COL16A1-210ENST00000474000 HOXC9P31274 260 aa16.85■□□□□ 0.29
COL16A1-210ENST00000474000 AMPHP49418 695 aa16.85■□□□□ 0.29
COL16A1-210ENST00000474000 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
COL16A1-210ENST00000474000 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
COL16A1-210ENST00000474000 FYB1O15117 783 aa16.84■□□□□ 0.29
COL16A1-210ENST00000474000 ANKRD36BQ8N2N9 1353 aa16.84■□□□□ 0.29
COL16A1-210ENST00000474000 ARXQ96QS3 562 aa16.83■□□□□ 0.28
COL16A1-210ENST00000474000 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
COL16A1-210ENST00000474000 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
COL16A1-210ENST00000474000 USP47Q96K76 1375 aa16.82■□□□□ 0.28
COL16A1-210ENST00000474000 ZNF827Q17R98 1081 aa16.82■□□□□ 0.28
COL16A1-210ENST00000474000 GGNBP2Q9H3C7 697 aa16.82■□□□□ 0.28
COL16A1-210ENST00000474000 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
COL16A1-210ENST00000474000 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
COL16A1-210ENST00000474000 CDCA8Q53HL2 280 aa16.8■□□□□ 0.28
COL16A1-210ENST00000474000 PRIM1P49642 420 aaKnown RBP16.78■□□□□ 0.28
COL16A1-210ENST00000474000 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
COL16A1-210ENST00000474000 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
COL16A1-210ENST00000474000 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
COL16A1-210ENST00000474000 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
COL16A1-210ENST00000474000 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
COL16A1-210ENST00000474000 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-210ENST00000474000 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms