RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 AXIN2Q9Y2T1 843 aa16.93■□□□□ 0.3
SMPD4-217ENST00000473720 THRAP3Q9Y2W1 955 aaKnown RBP16.93■□□□□ 0.3
SMPD4-217ENST00000473720 CSB-PGBD3P0DP91 1061 aa16.92■□□□□ 0.3
SMPD4-217ENST00000473720 KCNH5Q8NCM2 988 aa16.92■□□□□ 0.3
SMPD4-217ENST00000473720 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
SMPD4-217ENST00000473720 LRP5O75197 1615 aa16.91■□□□□ 0.3
SMPD4-217ENST00000473720 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
SMPD4-217ENST00000473720 NFAT5O94916 1531 aa16.91■□□□□ 0.3
SMPD4-217ENST00000473720 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
SMPD4-217ENST00000473720 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
SMPD4-217ENST00000473720 SRCAPQ6ZRS2 3230 aa16.9■□□□□ 0.3
SMPD4-217ENST00000473720 PEAK1Q9H792 1746 aa16.9■□□□□ 0.3
SMPD4-217ENST00000473720 DISP2A7MBM2 1401 aa16.89■□□□□ 0.29
SMPD4-217ENST00000473720 CD163L1Q9NR16 1453 aa16.89■□□□□ 0.29
SMPD4-217ENST00000473720 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-217ENST00000473720 ARHGEF25Q86VW2 580 aa16.89■□□□□ 0.29
SMPD4-217ENST00000473720 NME9Q86XW9 330 aa16.89■□□□□ 0.29
SMPD4-217ENST00000473720 WDR17Q8IZU2 1322 aa16.89■□□□□ 0.29
SMPD4-217ENST00000473720 DDB1Q16531 1140 aa16.88■□□□□ 0.29
SMPD4-217ENST00000473720 CAMKK2Q96RR4 588 aa16.88■□□□□ 0.29
SMPD4-217ENST00000473720 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
SMPD4-217ENST00000473720 RGPD2P0DJD1 1756 aa16.86■□□□□ 0.29
SMPD4-217ENST00000473720 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
SMPD4-217ENST00000473720 OVOS2A0A0J9YW53 1432 aa16.86■□□□□ 0.29
SMPD4-217ENST00000473720 OVOS2Q6IE36 1432 aa16.86■□□□□ 0.29
SMPD4-217ENST00000473720 A0A1W2PP64 1363 aa16.85■□□□□ 0.29
SMPD4-217ENST00000473720 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
SMPD4-217ENST00000473720 EDC4Q6P2E9 1401 aaKnown RBP16.84■□□□□ 0.29
SMPD4-217ENST00000473720 RGPD3A6NKT7 1758 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-217ENST00000473720 RGPD4Q7Z3J3 1758 aa16.82■□□□□ 0.28
SMPD4-217ENST00000473720 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
SMPD4-217ENST00000473720 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
SMPD4-217ENST00000473720 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
SMPD4-217ENST00000473720 ABCC6O95255 1503 aa16.81■□□□□ 0.28
SMPD4-217ENST00000473720 PARD3Q8TEW0 1356 aa16.81■□□□□ 0.28
SMPD4-217ENST00000473720 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
SMPD4-217ENST00000473720 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
SMPD4-217ENST00000473720 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-217ENST00000473720 TESK2Q96S53 571 aa16.8■□□□□ 0.28
SMPD4-217ENST00000473720 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
SMPD4-217ENST00000473720 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-217ENST00000473720 EXOC5O00471 708 aa16.79■□□□□ 0.28
SMPD4-217ENST00000473720 PTF1AQ7RTS3 328 aa16.79■□□□□ 0.28
SMPD4-217ENST00000473720 CDCA7Q9BWT1 371 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-217ENST00000473720 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
SMPD4-217ENST00000473720 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
SMPD4-217ENST00000473720 LTV1Q96GA3 475 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-217ENST00000473720 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
SMPD4-217ENST00000473720 ERBB3P21860 1342 aa16.77■□□□□ 0.28
SMPD4-217ENST00000473720 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.28
SMPD4-217ENST00000473720 BTAF1O14981 1849 aa16.77■□□□□ 0.27
SMPD4-217ENST00000473720 USP47Q96K76 1375 aa16.77■□□□□ 0.27
SMPD4-217ENST00000473720 NHSQ6T4R5 1651 aa16.76■□□□□ 0.27
SMPD4-217ENST00000473720 FBLN1P23142 703 aa16.75■□□□□ 0.27
SMPD4-217ENST00000473720 TMF1P82094 1093 aa16.75■□□□□ 0.27
SMPD4-217ENST00000473720 ACSBG1Q96GR2 724 aa16.75■□□□□ 0.27
SMPD4-217ENST00000473720 COG3Q96JB2 828 aa16.75■□□□□ 0.27
SMPD4-217ENST00000473720 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
SMPD4-217ENST00000473720 TNS2Q63HR2 1409 aa16.75■□□□□ 0.27
SMPD4-217ENST00000473720 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
SMPD4-217ENST00000473720 MYOM1P52179 1685 aa16.74■□□□□ 0.27
SMPD4-217ENST00000473720 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
SMPD4-217ENST00000473720 IL2RBP14784 551 aa16.73■□□□□ 0.27
SMPD4-217ENST00000473720 PLSCR1O15162 318 aa16.72■□□□□ 0.27
SMPD4-217ENST00000473720 AMPHP49418 695 aa16.72■□□□□ 0.27
SMPD4-217ENST00000473720 ANKRD36BQ8N2N9 1353 aa16.72■□□□□ 0.27
SMPD4-217ENST00000473720 MAP2P11137 1827 aaKnown RBP16.71■□□□□ 0.27
SMPD4-217ENST00000473720 KCNQ2O43526 872 aa16.71■□□□□ 0.27
SMPD4-217ENST00000473720 IP6K1Q92551 441 aa16.71■□□□□ 0.27
SMPD4-217ENST00000473720 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.27
SMPD4-217ENST00000473720 DOT1LQ8TEK3 1739 aa16.7■□□□□ 0.26
SMPD4-217ENST00000473720 SHANK3Q9BYB0 1731 aa16.7■□□□□ 0.26
SMPD4-217ENST00000473720 CASZ1Q86V15 1759 aa16.7■□□□□ 0.26
SMPD4-217ENST00000473720 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
SMPD4-217ENST00000473720 ANO8Q9HCE9 1232 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-217ENST00000473720 BCL9O00512 1426 aa16.69■□□□□ 0.26
SMPD4-217ENST00000473720 HOXC9P31274 260 aa16.68■□□□□ 0.26
SMPD4-217ENST00000473720 RRS1Q15050 365 aaKnown RBP16.68■□□□□ 0.26
SMPD4-217ENST00000473720 PROM2Q8N271 834 aa16.68■□□□□ 0.26
SMPD4-217ENST00000473720 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
SMPD4-217ENST00000473720 PPP1R1BQ9UD71 204 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-217ENST00000473720 TXNRD1Q16881 649 aa16.67■□□□□ 0.26
SMPD4-217ENST00000473720 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
SMPD4-217ENST00000473720 FYB1O15117 783 aa16.66■□□□□ 0.26
SMPD4-217ENST00000473720 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
SMPD4-217ENST00000473720 CDCA8Q53HL2 280 aa16.65■□□□□ 0.26
SMPD4-217ENST00000473720 PDGFDQ9GZP0 370 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-217ENST00000473720 STK32BQ9NY57 414 aa16.64■□□□□ 0.25
SMPD4-217ENST00000473720 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
SMPD4-217ENST00000473720 USHBP1Q8N6Y0 703 aa16.63■□□□□ 0.25
SMPD4-217ENST00000473720 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-217ENST00000473720 ZBTB7AO95365 584 aa16.62■□□□□ 0.25
SMPD4-217ENST00000473720 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
SMPD4-217ENST00000473720 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-217ENST00000473720 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
SMPD4-217ENST00000473720 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
SMPD4-217ENST00000473720 ITGB4P16144 1822 aa16.61■□□□□ 0.25
SMPD4-217ENST00000473720 SMG6Q86US8 1419 aaKnown RBP16.61■□□□□ 0.25
SMPD4-217ENST00000473720 MEGF6O75095 1541 aa16.6■□□□□ 0.25
SMPD4-217ENST00000473720 LY75O60449 1722 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms