RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
SNX4-204ENST00000473417 USP31Q70CQ4 1352 aa25.38■■□□□ 1.65
SNX4-204ENST00000473417 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
SNX4-204ENST00000473417 RREB1Q92766 1687 aa25.37■■□□□ 1.65
SNX4-204ENST00000473417 ST20-MTHFSA0A0A6YYL1 179 aa25.37■■□□□ 1.65
SNX4-204ENST00000473417 ARHGEF25Q86VW2 580 aa25.37■■□□□ 1.65
SNX4-204ENST00000473417 TESK2Q96S53 571 aa25.37■■□□□ 1.65
SNX4-204ENST00000473417 A0A1W2PP64 1363 aa25.35■■□□□ 1.65
SNX4-204ENST00000473417 FAM196AQ6ZSG2 479 aa25.35■■□□□ 1.65
SNX4-204ENST00000473417 TMC1Q8TDI8 760 aa25.35■■□□□ 1.65
SNX4-204ENST00000473417 AXIN2Q9Y2T1 843 aa25.35■■□□□ 1.65
SNX4-204ENST00000473417 WDR17Q8IZU2 1322 aa25.35■■□□□ 1.65
SNX4-204ENST00000473417 USP47Q96K76 1375 aa25.34■■□□□ 1.65
SNX4-204ENST00000473417 SLC12A5Q9H2X9 1139 aa25.34■■□□□ 1.65
SNX4-204ENST00000473417 NINLQ9Y2I6 1382 aa25.33■■□□□ 1.65
SNX4-204ENST00000473417 PDE3BQ13370 1112 aa25.33■■□□□ 1.65
SNX4-204ENST00000473417 HDGFL2Q7Z4V5 671 aaPredicted RBP25.33■■□□□ 1.65
SNX4-204ENST00000473417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.33■■□□□ 1.65
SNX4-204ENST00000473417 SOX12O15370 315 aa25.32■■□□□ 1.64
SNX4-204ENST00000473417 LRP5O75197 1615 aa25.31■■□□□ 1.64
SNX4-204ENST00000473417 NUP188Q5SRE5 1749 aa25.31■■□□□ 1.64
SNX4-204ENST00000473417 OVOS2A0A0J9YW53 1432 aa25.3■■□□□ 1.64
SNX4-204ENST00000473417 OVOS2Q6IE36 1432 aa25.3■■□□□ 1.64
SNX4-204ENST00000473417 EN1Q05925 392 aaPredicted RBP25.3■■□□□ 1.64
SNX4-204ENST00000473417 TOM1L2Q6ZVM7 507 aa25.3■■□□□ 1.64
SNX4-204ENST00000473417 NME9Q86XW9 330 aa25.3■■□□□ 1.64
SNX4-204ENST00000473417 TERF2IPQ9NYB0 399 aa25.3■■□□□ 1.64
SNX4-204ENST00000473417 RGPD3A6NKT7 1758 aaPredicted RBP25.3■■□□□ 1.64
SNX4-204ENST00000473417 RGPD4Q7Z3J3 1758 aa25.3■■□□□ 1.64
SNX4-204ENST00000473417 TRIM37O94972 964 aa25.29■■□□□ 1.64
SNX4-204ENST00000473417 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
SNX4-204ENST00000473417 OVOS2A0A0G2JMS6 1433 aa25.28■■□□□ 1.64
SNX4-204ENST00000473417 FAM208AQ9UK61 1670 aaKnown RBP25.27■■□□□ 1.64
SNX4-204ENST00000473417 MYOM1P52179 1685 aa25.26■■□□□ 1.63
SNX4-204ENST00000473417 PARD3Q8TEW0 1356 aa25.25■■□□□ 1.63
SNX4-204ENST00000473417 KIF20BQ96Q89 1820 aa25.24■■□□□ 1.63
SNX4-204ENST00000473417 CARD10Q9BWT7 1032 aa25.24■■□□□ 1.63
SNX4-204ENST00000473417 ANKRD36BQ8N2N9 1353 aa25.22■■□□□ 1.63
SNX4-204ENST00000473417 CCDC7Q96M83 1385 aa25.22■■□□□ 1.63
SNX4-204ENST00000473417 EZH2Q15910 746 aaKnown RBP25.22■■□□□ 1.63
SNX4-204ENST00000473417 DDB1Q16531 1140 aa25.22■■□□□ 1.63
SNX4-204ENST00000473417 CAMKK2Q96RR4 588 aa25.22■■□□□ 1.63
SNX4-204ENST00000473417 C11orf95C9JLR9 678 aaPredicted RBP25.21■■□□□ 1.63
SNX4-204ENST00000473417 APBA3O96018 575 aa25.21■■□□□ 1.63
SNX4-204ENST00000473417 CSB-PGBD3P0DP91 1061 aa25.21■■□□□ 1.63
SNX4-204ENST00000473417 CDCA7Q9BWT1 371 aaPredicted RBP25.21■■□□□ 1.63
SNX4-204ENST00000473417 ERBB3P21860 1342 aa25.2■■□□□ 1.62
SNX4-204ENST00000473417 EIF4G2P78344 907 aaKnown RBP eCLIP25.2■■□□□ 1.62
SNX4-204ENST00000473417 TMF1P82094 1093 aa25.19■■□□□ 1.62
SNX4-204ENST00000473417 PSDA5PKW4 1024 aaPredicted RBP25.18■■□□□ 1.62
SNX4-204ENST00000473417 HSPA5P11021 654 aaKnown RBP25.18■■□□□ 1.62
SNX4-204ENST00000473417 BCL9O00512 1426 aa25.18■■□□□ 1.62
SNX4-204ENST00000473417 TNS2Q63HR2 1409 aa25.18■■□□□ 1.62
SNX4-204ENST00000473417 RGPD2P0DJD1 1756 aa25.16■■□□□ 1.62
SNX4-204ENST00000473417 NHSQ6T4R5 1651 aa25.15■■□□□ 1.62
SNX4-204ENST00000473417 MARCH10Q8NA82 808 aaPredicted RBP25.14■■□□□ 1.62
SNX4-204ENST00000473417 R3HDM1Q15032 1099 aaKnown RBP25.11■■□□□ 1.61
SNX4-204ENST00000473417 ANKRD24Q8TF21 1146 aa25.11■■□□□ 1.61
SNX4-204ENST00000473417 COG3Q96JB2 828 aa25.11■■□□□ 1.61
SNX4-204ENST00000473417 CDCA8Q53HL2 280 aa25.1■■□□□ 1.61
SNX4-204ENST00000473417 NLRP2Q9NX02 1062 aa25.09■■□□□ 1.61
SNX4-204ENST00000473417 EXOC5O00471 708 aa25.08■■□□□ 1.61
SNX4-204ENST00000473417 IP6K1Q92551 441 aa25.08■■□□□ 1.61
SNX4-204ENST00000473417 SHANK3Q9BYB0 1731 aa25.08■■□□□ 1.61
SNX4-204ENST00000473417 BCL11BQ9C0K0 894 aaPredicted RBP25.07■■□□□ 1.6
SNX4-204ENST00000473417 MAP3K19Q56UN5 1328 aa25.07■■□□□ 1.6
SNX4-204ENST00000473417 BTAF1O14981 1849 aa25.06■■□□□ 1.6
SNX4-204ENST00000473417 RTL1A6NKG5 1358 aa25.05■■□□□ 1.6
SNX4-204ENST00000473417 PLSCR1O15162 318 aa25.05■■□□□ 1.6
SNX4-204ENST00000473417 IL2RBP14784 551 aa25.05■■□□□ 1.6
SNX4-204ENST00000473417 PTF1AQ7RTS3 328 aa25.05■■□□□ 1.6
SNX4-204ENST00000473417 POLR3GLQ9BT43 218 aa25.05■■□□□ 1.6
SNX4-204ENST00000473417 ANKRD26Q9UPS8 1709 aa25.04■■□□□ 1.6
SNX4-204ENST00000473417 FYB1O15117 783 aa25.04■■□□□ 1.6
SNX4-204ENST00000473417 HOXC9P31274 260 aa25.03■■□□□ 1.6
SNX4-204ENST00000473417 CASZ1Q86V15 1759 aa25.02■■□□□ 1.6
SNX4-204ENST00000473417 KAT6BQ8WYB5 2073 aa25.01■■□□□ 1.59
SNX4-204ENST00000473417 FBLN1P23142 703 aa25.01■■□□□ 1.59
SNX4-204ENST00000473417 NBPF14Q5TI25 921 aa25.01■■□□□ 1.59
SNX4-204ENST00000473417 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
SNX4-204ENST00000473417 DOT1LQ8TEK3 1739 aa25■■□□□ 1.59
SNX4-204ENST00000473417 AMPHP49418 695 aa24.99■■□□□ 1.59
SNX4-204ENST00000473417 NSD3Q9BZ95 1437 aa24.99■■□□□ 1.59
SNX4-204ENST00000473417 LTV1Q96GA3 475 aaPredicted RBP24.98■■□□□ 1.59
SNX4-204ENST00000473417 MAP2P11137 1827 aaKnown RBP24.98■■□□□ 1.59
SNX4-204ENST00000473417 CARD14Q9BXL6 1004 aa24.97■■□□□ 1.59
SNX4-204ENST00000473417 RRS1Q15050 365 aaKnown RBP24.96■■□□□ 1.59
SNX4-204ENST00000473417 PAPPAQ13219 1627 aa24.95■■□□□ 1.58
SNX4-204ENST00000473417 MEGF6O75095 1541 aa24.95■■□□□ 1.58
SNX4-204ENST00000473417 KIF24Q5T7B8 1368 aa24.94■■□□□ 1.58
SNX4-204ENST00000473417 KCNQ2O43526 872 aa24.94■■□□□ 1.58
SNX4-204ENST00000473417 PROM2Q8N271 834 aa24.94■■□□□ 1.58
SNX4-204ENST00000473417 SMG6Q86US8 1419 aaKnown RBP24.94■■□□□ 1.58
SNX4-204ENST00000473417 ANO8Q9HCE9 1232 aaPredicted RBP24.93■■□□□ 1.58
SNX4-204ENST00000473417 INSRP06213 1382 aa24.92■■□□□ 1.58
SNX4-204ENST00000473417 FLT4P35916 1363 aa24.92■■□□□ 1.58
SNX4-204ENST00000473417 ACSBG1Q96GR2 724 aa24.91■■□□□ 1.58
SNX4-204ENST00000473417 TXNRD1Q16881 649 aa24.9■■□□□ 1.58
SNX4-204ENST00000473417 LY75O60449 1722 aa24.89■■□□□ 1.58
SNX4-204ENST00000473417 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms