RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 GALR2O43603 387 aaPredicted RBP10.05□□□□□ -0.8
CKS1B-205ENST00000473344 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
CKS1B-205ENST00000473344 CCDC61Q9Y6R9 512 aa10.05□□□□□ -0.8
CKS1B-205ENST00000473344 THSD7AQ9UPZ6 1657 aa10.05□□□□□ -0.8
CKS1B-205ENST00000473344 ITSN1Q15811 1721 aa10.04□□□□□ -0.8
CKS1B-205ENST00000473344 PARD3Q8TEW0 1356 aa10.04□□□□□ -0.8
CKS1B-205ENST00000473344 NBPF8Q3BBV2 869 aa10.04□□□□□ -0.8
CKS1B-205ENST00000473344 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
CKS1B-205ENST00000473344 BARGINQ6ZT62 677 aa10.04□□□□□ -0.8
CKS1B-205ENST00000473344 PROM2Q8N271 834 aa10.04□□□□□ -0.8
CKS1B-205ENST00000473344 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
CKS1B-205ENST00000473344 SRPK2P78362 688 aaKnown RBP10.03□□□□□ -0.8
CKS1B-205ENST00000473344 LARP1Q6PKG0 1096 aaKnown RBP10.03□□□□□ -0.8
CKS1B-205ENST00000473344 SSH2Q76I76 1423 aa10.03□□□□□ -0.8
CKS1B-205ENST00000473344 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
CKS1B-205ENST00000473344 CRYBG1Q9Y4K1 1723 aa10.03□□□□□ -0.8
CKS1B-205ENST00000473344 PHRF1Q9P1Y6 1649 aaKnown RBP10.03□□□□□ -0.8
CKS1B-205ENST00000473344 POLR3AO14802 1390 aaPredicted RBP10.02□□□□□ -0.8
CKS1B-205ENST00000473344 PLEKHG3A1L390 1219 aa10.02□□□□□ -0.81
CKS1B-205ENST00000473344 NLRP13Q86W25 1043 aa10.02□□□□□ -0.81
CKS1B-205ENST00000473344 THRAP3Q9Y2W1 955 aaKnown RBP10.02□□□□□ -0.81
CKS1B-205ENST00000473344 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.81
CKS1B-205ENST00000473344 TNS1Q9HBL0 1735 aaKnown RBP10.02□□□□□ -0.81
CKS1B-205ENST00000473344 ZBTB7CA1YPR0 619 aa10.01□□□□□ -0.81
CKS1B-205ENST00000473344 GCP02774 474 aa10.01□□□□□ -0.81
CKS1B-205ENST00000473344 PPP1R1BQ9UD71 204 aaPredicted RBP10.01□□□□□ -0.81
CKS1B-205ENST00000473344 CPDO75976 1380 aa10.01□□□□□ -0.81
CKS1B-205ENST00000473344 C11orf95C9JLR9 678 aaPredicted RBP10□□□□□ -0.81
CKS1B-205ENST00000473344 PHF12Q96QT6 1004 aa10□□□□□ -0.81
CKS1B-205ENST00000473344 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
CKS1B-205ENST00000473344 NRKQ7Z2Y5 1582 aa9.99□□□□□ -0.81
CKS1B-205ENST00000473344 CAMTA1Q9Y6Y1 1673 aa9.99□□□□□ -0.81
CKS1B-205ENST00000473344 NLRP6P59044 892 aa9.98□□□□□ -0.81
CKS1B-205ENST00000473344 SPON1Q9HCB6 807 aa9.98□□□□□ -0.81
CKS1B-205ENST00000473344 CABP2Q9NPB3 220 aa9.98□□□□□ -0.81
CKS1B-205ENST00000473344 USP19O94966 1318 aa9.98□□□□□ -0.81
CKS1B-205ENST00000473344 CENPJQ9HC77 1338 aaPredicted RBP9.98□□□□□ -0.81
CKS1B-205ENST00000473344 TOPAZ1Q8N9V7 1692 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 YY1P25490 414 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 DDB1Q16531 1140 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 TOM1L2Q6ZVM7 507 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 BRD4O60885 1362 aaPredicted RBP9.97□□□□□ -0.81
CKS1B-205ENST00000473344 OVOS2A0A0G2JMS6 1433 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 OVOS2A0A0J9YW53 1432 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 CRB1P82279 1406 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 OVOS2Q6IE36 1432 aa9.97□□□□□ -0.81
CKS1B-205ENST00000473344 COL5A2P05997 1499 aaPredicted RBP9.97□□□□□ -0.81
CKS1B-205ENST00000473344 KCNQ2O43526 872 aa9.96□□□□□ -0.82
CKS1B-205ENST00000473344 CABP1Q9NZU7 370 aa9.96□□□□□ -0.82
CKS1B-205ENST00000473344 LMO7Q8WWI1 1683 aa9.96□□□□□ -0.82
CKS1B-205ENST00000473344 UTRNP46939 3433 aa9.95□□□□□ -0.82
CKS1B-205ENST00000473344 RREB1Q92766 1687 aa9.95□□□□□ -0.82
CKS1B-205ENST00000473344 KIAA1210Q9ULL0 1709 aa9.95□□□□□ -0.82
CKS1B-205ENST00000473344 USP6P35125 1406 aa9.94□□□□□ -0.82
CKS1B-205ENST00000473344 AATKQ6ZMQ8 1374 aa9.94□□□□□ -0.82
CKS1B-205ENST00000473344 PLSCR1O15162 318 aa9.94□□□□□ -0.82
CKS1B-205ENST00000473344 NUP188Q5SRE5 1749 aa9.93□□□□□ -0.82
CKS1B-205ENST00000473344 EVC2Q86UK5 1308 aa9.93□□□□□ -0.82
CKS1B-205ENST00000473344 CSB-PGBD3P0DP91 1061 aa9.93□□□□□ -0.82
CKS1B-205ENST00000473344 KCNH5Q8NCM2 988 aa9.93□□□□□ -0.82
CKS1B-205ENST00000473344 CDCA7Q9BWT1 371 aaPredicted RBP9.93□□□□□ -0.82
CKS1B-205ENST00000473344 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
CKS1B-205ENST00000473344 PARP4Q9UKK3 1724 aaKnown RBP9.93□□□□□ -0.82
CKS1B-205ENST00000473344 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
CKS1B-205ENST00000473344 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
CKS1B-205ENST00000473344 SOX12O15370 315 aa9.92□□□□□ -0.82
CKS1B-205ENST00000473344 ASTLQ6HA08 431 aaPredicted RBP9.92□□□□□ -0.82
CKS1B-205ENST00000473344 C7P10643 843 aa9.91□□□□□ -0.82
CKS1B-205ENST00000473344 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
CKS1B-205ENST00000473344 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
CKS1B-205ENST00000473344 EXOC5O00471 708 aa9.9□□□□□ -0.82
CKS1B-205ENST00000473344 SLIT3O75094 1523 aa9.9□□□□□ -0.82
CKS1B-205ENST00000473344 CPSF1Q10570 1443 aaKnown RBP9.9□□□□□ -0.83
CKS1B-205ENST00000473344 QRICH2Q9H0J4 1663 aa9.9□□□□□ -0.83
CKS1B-205ENST00000473344 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
CKS1B-205ENST00000473344 ZBTB7AO95365 584 aa9.89□□□□□ -0.83
CKS1B-205ENST00000473344 ARHGEF25Q86VW2 580 aa9.89□□□□□ -0.83
CKS1B-205ENST00000473344 MARCH10Q8NA82 808 aaPredicted RBP9.89□□□□□ -0.83
CKS1B-205ENST00000473344 MS4A3Q96HJ5 214 aa9.89□□□□□ -0.83
CKS1B-205ENST00000473344 CARD10Q9BWT7 1032 aa9.89□□□□□ -0.83
CKS1B-205ENST00000473344 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
CKS1B-205ENST00000473344 STK32BQ9NY57 414 aa9.89□□□□□ -0.83
CKS1B-205ENST00000473344 TTC21BQ7Z4L5 1316 aa9.88□□□□□ -0.83
CKS1B-205ENST00000473344 TTC21AQ8NDW8 1320 aa9.88□□□□□ -0.83
CKS1B-205ENST00000473344 PTF1AQ7RTS3 328 aa9.88□□□□□ -0.83
CKS1B-205ENST00000473344 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
CKS1B-205ENST00000473344 RGPD3A6NKT7 1758 aaPredicted RBP9.88□□□□□ -0.83
CKS1B-205ENST00000473344 RGPD4Q7Z3J3 1758 aa9.88□□□□□ -0.83
CKS1B-205ENST00000473344 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
CKS1B-205ENST00000473344 PEAK1Q9H792 1746 aa9.87□□□□□ -0.83
CKS1B-205ENST00000473344 PIK3C2AO00443 1686 aa9.87□□□□□ -0.83
CKS1B-205ENST00000473344 TXNRD1Q16881 649 aa9.87□□□□□ -0.83
CKS1B-205ENST00000473344 OTUD5Q96G74 571 aa9.87□□□□□ -0.83
CKS1B-205ENST00000473344 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
CKS1B-205ENST00000473344 BCL9O00512 1426 aa9.87□□□□□ -0.83
CKS1B-205ENST00000473344 KTN1Q86UP2 1357 aaKnown RBP9.87□□□□□ -0.83
CKS1B-205ENST00000473344 CCDC7Q96M83 1385 aa9.87□□□□□ -0.83
CKS1B-205ENST00000473344 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
CKS1B-205ENST00000473344 SLC15A2Q16348 729 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms