RNA–Protein interactions for RNA: ENST00000472856.1

SOX2-OT-205, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 454 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-205ENST00000472856 PHTF2Q8N3S3 785 aa10.14□□□□□ -0.79
SOX2-OT-205ENST00000472856 SCAMP3O14828 347 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-205ENST00000472856 C21orf2O43822 256 aa10.13□□□□□ -0.79
SOX2-OT-205ENST00000472856 CFHP08603 1231 aa10.13□□□□□ -0.79
SOX2-OT-205ENST00000472856 ATP1A2P50993 1020 aa10.13□□□□□ -0.79
SOX2-OT-205ENST00000472856 HDGFP51858 240 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-205ENST00000472856 HDLBPQ00341 1268 aaKnown RBP10.13□□□□□ -0.79
SOX2-OT-205ENST00000472856 SLC4A3P48751 1232 aa10.12□□□□□ -0.79
SOX2-OT-205ENST00000472856 COL19A1Q14993 1142 aa10.12□□□□□ -0.79
SOX2-OT-205ENST00000472856 OCLNQ16625 522 aa10.12□□□□□ -0.79
SOX2-OT-205ENST00000472856 GTF3C2Q8WUA4 911 aaPredicted RBP10.12□□□□□ -0.79
SOX2-OT-205ENST00000472856 KIAA1468Q9P260 1216 aa10.12□□□□□ -0.79
SOX2-OT-205ENST00000472856 NOD1Q9Y239 953 aa10.12□□□□□ -0.79
SOX2-OT-205ENST00000472856 PCDHB9Q9Y5E1 797 aa10.12□□□□□ -0.79
SOX2-OT-205ENST00000472856 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
SOX2-OT-205ENST00000472856 MAP7D1Q3KQU3 841 aa10.11□□□□□ -0.79
SOX2-OT-205ENST00000472856 LARGE2Q8N3Y3 721 aa10.11□□□□□ -0.79
SOX2-OT-205ENST00000472856 ZNF592Q92610 1267 aa10.11□□□□□ -0.79
SOX2-OT-205ENST00000472856 HIRIP3Q9BW71 556 aaPredicted RBP10.11□□□□□ -0.79
SOX2-OT-205ENST00000472856 CWC22Q9HCG8 908 aaKnown RBP10.11□□□□□ -0.79
SOX2-OT-205ENST00000472856 RBM19Q9Y4C8 960 aaKnown RBP10.11□□□□□ -0.79
SOX2-OT-205ENST00000472856 SNPHO15079 494 aa10.1□□□□□ -0.79
SOX2-OT-205ENST00000472856 ECM1Q16610 540 aa10.1□□□□□ -0.79
SOX2-OT-205ENST00000472856 PIK3R5Q8WYR1 880 aa10.1□□□□□ -0.79
SOX2-OT-205ENST00000472856 TANGO6Q9C0B7 1094 aa10.1□□□□□ -0.79
SOX2-OT-205ENST00000472856 SEPT3Q9UH03 358 aa10.1□□□□□ -0.79
SOX2-OT-205ENST00000472856 SEC13P55735 322 aa10.09□□□□□ -0.79
SOX2-OT-205ENST00000472856 ARHGAP4P98171 946 aa10.09□□□□□ -0.79
SOX2-OT-205ENST00000472856 FKBP4Q02790 459 aaKnown RBP eCLIP10.09□□□□□ -0.79
SOX2-OT-205ENST00000472856 MRPL58Q14197 206 aaKnown RBP10.09□□□□□ -0.79
SOX2-OT-205ENST00000472856 DNMT3AQ9Y6K1 912 aaPredicted RBP10.09□□□□□ -0.79
SOX2-OT-205ENST00000472856 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 ZBTB7BO15156 539 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 MCCD1P59942 119 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 MTMR3Q13615 1198 aa10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 TRAF7Q6Q0C0 670 aa10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 RGL4Q8IZJ4 473 aa10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 MKNK1Q9BUB5 465 aa10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 MAP10Q9P2G4 905 aa10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 KIAA1024Q9UPX6 916 aa10.08□□□□□ -0.8
SOX2-OT-205ENST00000472856 LGR5O75473 907 aa10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 DKK1O94907 266 aa10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 HOXB1P14653 301 aaPredicted RBP10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 Q3C1V9 767 aa10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 SIX5Q8N196 739 aa10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 DNAJC2Q99543 621 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 CHIC2Q9UKJ5 165 aa10.07□□□□□ -0.8
SOX2-OT-205ENST00000472856 F12P00748 615 aaPredicted RBP10.06□□□□□ -0.8
SOX2-OT-205ENST00000472856 P4HBP07237 508 aaKnown RBP10.06□□□□□ -0.8
SOX2-OT-205ENST00000472856 PTK2Q05397 1052 aa10.06□□□□□ -0.8
SOX2-OT-205ENST00000472856 SF3B2Q13435 895 aaKnown RBP10.06□□□□□ -0.8
SOX2-OT-205ENST00000472856 SLC27A5Q9Y2P5 690 aa10.06□□□□□ -0.8
SOX2-OT-205ENST00000472856 SFI1A8K8P3 1242 aa10.05□□□□□ -0.8
SOX2-OT-205ENST00000472856 RAD51AP2Q09MP3 1159 aa10.05□□□□□ -0.8
SOX2-OT-205ENST00000472856 TMEM87AQ8NBN3 555 aa10.05□□□□□ -0.8
SOX2-OT-205ENST00000472856 OTUD5Q96G74 571 aa10.05□□□□□ -0.8
SOX2-OT-205ENST00000472856 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
SOX2-OT-205ENST00000472856 BRPF3Q9ULD4 1205 aa10.05□□□□□ -0.8
SOX2-OT-205ENST00000472856 CTHP32929 405 aa10.04□□□□□ -0.8
SOX2-OT-205ENST00000472856 GTF2IP78347 998 aa10.04□□□□□ -0.8
SOX2-OT-205ENST00000472856 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
SOX2-OT-205ENST00000472856 MORN1Q5T089 497 aa10.04□□□□□ -0.8
SOX2-OT-205ENST00000472856 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
SOX2-OT-205ENST00000472856 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 NOP9Q86U38 636 aaKnown RBP10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 NT5DC4Q86YG4 428 aa10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 TPCN2Q8NHX9 752 aa10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 LNPKQ9C0E8 428 aa10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 GPSM3Q9Y4H4 160 aa10.03□□□□□ -0.8
SOX2-OT-205ENST00000472856 RNF40O75150 1001 aa10.02□□□□□ -0.81
SOX2-OT-205ENST00000472856 KMT5BQ4FZB7 885 aa10.02□□□□□ -0.81
SOX2-OT-205ENST00000472856 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.81
SOX2-OT-205ENST00000472856 LDLRAD1Q5T700 205 aa10.02□□□□□ -0.81
SOX2-OT-205ENST00000472856 CAPN12Q6ZSI9 719 aa10.02□□□□□ -0.81
SOX2-OT-205ENST00000472856 PRKAG2Q9UGJ0 569 aa10.02□□□□□ -0.81
SOX2-OT-205ENST00000472856 XPCQ01831 940 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-205ENST00000472856 PSME1Q06323 249 aa10.01□□□□□ -0.81
SOX2-OT-205ENST00000472856 PDXDC2PQ6P474 469 aa10.01□□□□□ -0.81
SOX2-OT-205ENST00000472856 DHX38Q92620 1227 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-205ENST00000472856 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
SOX2-OT-205ENST00000472856 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
SOX2-OT-205ENST00000472856 RNF19BQ6ZMZ0 732 aa10□□□□□ -0.81
SOX2-OT-205ENST00000472856 TMC7Q7Z402 723 aa10□□□□□ -0.81
SOX2-OT-205ENST00000472856 METTL16Q86W50 562 aaKnown RBP10□□□□□ -0.81
SOX2-OT-205ENST00000472856 FAM161BQ96MY7 647 aa10□□□□□ -0.81
SOX2-OT-205ENST00000472856 USB1Q9BQ65 265 aaKnown RBP10□□□□□ -0.81
SOX2-OT-205ENST00000472856 TINF2Q9BSI4 451 aa10□□□□□ -0.81
SOX2-OT-205ENST00000472856 CAPN10Q9HC96 672 aa10□□□□□ -0.81
SOX2-OT-205ENST00000472856 CUEDC1Q9NWM3 386 aaPredicted RBP10□□□□□ -0.81
SOX2-OT-205ENST00000472856 ATP2B1P20020 1258 aa9.99□□□□□ -0.81
SOX2-OT-205ENST00000472856 GTF2F1P35269 517 aaKnown RBP eCLIP9.99□□□□□ -0.81
SOX2-OT-205ENST00000472856 SAMD7Q7Z3H4 446 aa9.99□□□□□ -0.81
SOX2-OT-205ENST00000472856 CCDC85AQ96PX6 553 aaPredicted RBP9.99□□□□□ -0.81
SOX2-OT-205ENST00000472856 MRS2Q9HD23 443 aa9.99□□□□□ -0.81
SOX2-OT-205ENST00000472856 TMA7Q9Y2S6 64 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-205ENST00000472856 FKBP5Q13451 457 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms