RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 SYT17Q9BSW7 474 aa20.32■□□□□ 0.84
SMURF1-203ENST00000472627 PPIP5K1Q6PFW1 1433 aa20.32■□□□□ 0.84
SMURF1-203ENST00000472627 SBF2Q86WG5 1849 aa20.32■□□□□ 0.84
SMURF1-203ENST00000472627 NLRP6P59044 892 aa20.31■□□□□ 0.84
SMURF1-203ENST00000472627 C1QTNF8P60827 252 aa20.31■□□□□ 0.84
SMURF1-203ENST00000472627 SLC15A2Q16348 729 aa20.3■□□□□ 0.84
SMURF1-203ENST00000472627 TXNRD1Q16881 649 aa20.3■□□□□ 0.84
SMURF1-203ENST00000472627 WDR17Q8IZU2 1322 aa20.29■□□□□ 0.84
SMURF1-203ENST00000472627 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
SMURF1-203ENST00000472627 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
SMURF1-203ENST00000472627 AKAP12Q02952 1782 aa20.27■□□□□ 0.84
SMURF1-203ENST00000472627 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.84
SMURF1-203ENST00000472627 PROM2Q8N271 834 aa20.27■□□□□ 0.84
SMURF1-203ENST00000472627 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
SMURF1-203ENST00000472627 CHD4Q14839 1912 aa20.26■□□□□ 0.83
SMURF1-203ENST00000472627 SLIT3O75094 1523 aa20.26■□□□□ 0.83
SMURF1-203ENST00000472627 EXOC5O00471 708 aa20.25■□□□□ 0.83
SMURF1-203ENST00000472627 ARXQ96QS3 562 aa20.25■□□□□ 0.83
SMURF1-203ENST00000472627 PTF1AQ7RTS3 328 aa20.24■□□□□ 0.83
SMURF1-203ENST00000472627 KCNH5Q8NCM2 988 aa20.24■□□□□ 0.83
SMURF1-203ENST00000472627 WNK3Q9BYP7 1800 aa20.24■□□□□ 0.83
SMURF1-203ENST00000472627 USP6P35125 1406 aa20.24■□□□□ 0.83
SMURF1-203ENST00000472627 MAP3K5Q99683 1374 aa20.23■□□□□ 0.83
SMURF1-203ENST00000472627 CARD10Q9BWT7 1032 aa20.23■□□□□ 0.83
SMURF1-203ENST00000472627 KIAA1210Q9ULL0 1709 aa20.23■□□□□ 0.83
SMURF1-203ENST00000472627 CENPJQ9HC77 1338 aaPredicted RBP20.23■□□□□ 0.83
SMURF1-203ENST00000472627 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
SMURF1-203ENST00000472627 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
SMURF1-203ENST00000472627 GPR162Q16538 588 aa20.22■□□□□ 0.83
SMURF1-203ENST00000472627 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
SMURF1-203ENST00000472627 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
SMURF1-203ENST00000472627 UTRNP46939 3433 aa20.21■□□□□ 0.83
SMURF1-203ENST00000472627 IFFO2Q5TF58 517 aa20.21■□□□□ 0.83
SMURF1-203ENST00000472627 SGIP1Q9BQI5 828 aa20.2■□□□□ 0.82
SMURF1-203ENST00000472627 CABP1Q9NZU7 370 aa20.2■□□□□ 0.82
SMURF1-203ENST00000472627 TNS2Q63HR2 1409 aa20.19■□□□□ 0.82
SMURF1-203ENST00000472627 AXIN2Q9Y2T1 843 aa20.18■□□□□ 0.82
SMURF1-203ENST00000472627 QRICH2Q9H0J4 1663 aa20.18■□□□□ 0.82
SMURF1-203ENST00000472627 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
SMURF1-203ENST00000472627 COL18A1P39060 1754 aa20.16■□□□□ 0.82
SMURF1-203ENST00000472627 POLD1P28340 1107 aa20.16■□□□□ 0.82
SMURF1-203ENST00000472627 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
SMURF1-203ENST00000472627 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
SMURF1-203ENST00000472627 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
SMURF1-203ENST00000472627 SOX12O15370 315 aa20.14■□□□□ 0.81
SMURF1-203ENST00000472627 KLHL34Q8N239 644 aa20.14■□□□□ 0.81
SMURF1-203ENST00000472627 ABCC6O95255 1503 aa20.13■□□□□ 0.81
SMURF1-203ENST00000472627 SLC16A10Q8TF71 515 aa20.13■□□□□ 0.81
SMURF1-203ENST00000472627 EVC2Q86UK5 1308 aa20.12■□□□□ 0.81
SMURF1-203ENST00000472627 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
SMURF1-203ENST00000472627 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
SMURF1-203ENST00000472627 TRPM1Q7Z4N2 1603 aa20.12■□□□□ 0.81
SMURF1-203ENST00000472627 NBPF1Q3BBV0 1214 aa20.11■□□□□ 0.81
SMURF1-203ENST00000472627 ACSBG1Q96GR2 724 aa20.11■□□□□ 0.81
SMURF1-203ENST00000472627 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
SMURF1-203ENST00000472627 PAPPAQ13219 1627 aa20.09■□□□□ 0.81
SMURF1-203ENST00000472627 IL2RBP14784 551 aa20.08■□□□□ 0.81
SMURF1-203ENST00000472627 GRIN3BO60391 1043 aa20.07■□□□□ 0.8
SMURF1-203ENST00000472627 SLC27A3Q5K4L6 730 aa20.07■□□□□ 0.8
SMURF1-203ENST00000472627 NLRP2Q9NX02 1062 aa20.07■□□□□ 0.8
SMURF1-203ENST00000472627 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
SMURF1-203ENST00000472627 ZNF827Q17R98 1081 aa20.06■□□□□ 0.8
SMURF1-203ENST00000472627 ERBB3P21860 1342 aa20.04■□□□□ 0.8
SMURF1-203ENST00000472627 NFAT5O94916 1531 aa20.04■□□□□ 0.8
SMURF1-203ENST00000472627 BTAF1O14981 1849 aa20.04■□□□□ 0.8
SMURF1-203ENST00000472627 TFCP2L1Q9NZI6 479 aa20.03■□□□□ 0.8
SMURF1-203ENST00000472627 KTN1Q86UP2 1357 aaKnown RBP20.03■□□□□ 0.8
SMURF1-203ENST00000472627 AKT1S1Q96B36 256 aa20.01■□□□□ 0.79
SMURF1-203ENST00000472627 LRRC4BQ9NT99 713 aa20.01■□□□□ 0.79
SMURF1-203ENST00000472627 QSER1Q2KHR3 1735 aa20■□□□□ 0.79
SMURF1-203ENST00000472627 PNPLA7Q6ZV29 1317 aa19.99■□□□□ 0.79
SMURF1-203ENST00000472627 SHANK3Q9BYB0 1731 aa19.98■□□□□ 0.79
SMURF1-203ENST00000472627 ANKRD24Q8TF21 1146 aa19.97■□□□□ 0.79
SMURF1-203ENST00000472627 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
SMURF1-203ENST00000472627 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
SMURF1-203ENST00000472627 NLGN2Q8NFZ4 835 aa19.96■□□□□ 0.79
SMURF1-203ENST00000472627 USP31Q70CQ4 1352 aa19.95■□□□□ 0.79
SMURF1-203ENST00000472627 MSH5O43196 834 aa19.95■□□□□ 0.78
SMURF1-203ENST00000472627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.95■□□□□ 0.781e-6■■■□□ 16.6
SMURF1-203ENST00000472627 DDX54Q8TDD1 881 aaKnown RBP19.95■□□□□ 0.78
SMURF1-203ENST00000472627 SYTL4Q96C24 671 aaPredicted RBP19.95■□□□□ 0.78
SMURF1-203ENST00000472627 GPBP1L1Q9HC44 474 aaPredicted RBP19.95■□□□□ 0.78
SMURF1-203ENST00000472627 CEP350Q5VT06 3117 aa19.93■□□□□ 0.78
SMURF1-203ENST00000472627 COL24A1Q17RW2 1714 aa19.93■□□□□ 0.78
SMURF1-203ENST00000472627 ATP10DQ9P241 1426 aa19.93■□□□□ 0.78
SMURF1-203ENST00000472627 GOLGB1Q14789 3259 aaKnown RBP19.92■□□□□ 0.78
SMURF1-203ENST00000472627 MON2Q7Z3U7 1717 aa19.91■□□□□ 0.78
SMURF1-203ENST00000472627 YBX3P16989 372 aaKnown RBP eCLIP19.91■□□□□ 0.78
SMURF1-203ENST00000472627 ROCK2O75116 1388 aaKnown RBP19.91■□□□□ 0.78
SMURF1-203ENST00000472627 ANKRD36BQ8N2N9 1353 aa19.91■□□□□ 0.78
SMURF1-203ENST00000472627 LTN1O94822 1766 aa19.9■□□□□ 0.78
SMURF1-203ENST00000472627 HDGFL2Q7Z4V5 671 aaPredicted RBP19.9■□□□□ 0.78
SMURF1-203ENST00000472627 CCNL1Q9UK58 526 aaPredicted RBP19.9■□□□□ 0.78
SMURF1-203ENST00000472627 HSPA6P17066 643 aa19.89■□□□□ 0.77
SMURF1-203ENST00000472627 USP54Q70EL1 1684 aa19.89■□□□□ 0.77
SMURF1-203ENST00000472627 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
SMURF1-203ENST00000472627 NME9Q86XW9 330 aa19.88■□□□□ 0.77
SMURF1-203ENST00000472627 CD2APQ9Y5K6 639 aa19.88■□□□□ 0.77
SMURF1-203ENST00000472627 FAM208AQ9UK61 1670 aaKnown RBP19.87■□□□□ 0.77
SMURF1-203ENST00000472627 USP47Q96K76 1375 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms