RNA–Protein interactions for RNA: ENST00000472612.5

PHTF1-208, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-208ENST00000472612 C1QTNF2Q9BXJ5 285 aa11.5□□□□□ -0.57
PHTF1-208ENST00000472612 KRTAP4-6Q9BYQ5 205 aa11.5□□□□□ -0.57
PHTF1-208ENST00000472612 FSHRP23945 695 aa11.49□□□□□ -0.57
PHTF1-208ENST00000472612 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
PHTF1-208ENST00000472612 DNMT3LQ9UJW3 386 aa11.49□□□□□ -0.57
PHTF1-208ENST00000472612 MAP4K5Q9Y4K4 846 aa11.49□□□□□ -0.57
PHTF1-208ENST00000472612 TSEN34Q9BSV6 310 aaKnown RBP11.48□□□□□ -0.57
PHTF1-208ENST00000472612 NUTM2BA6NNL0 878 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-208ENST00000472612 NUTM2EB1AL46 878 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-208ENST00000472612 TRIM66O15016 1216 aa11.47□□□□□ -0.57
PHTF1-208ENST00000472612 NBPF14Q5TI25 921 aa11.47□□□□□ -0.57
PHTF1-208ENST00000472612 NUTM2DQ5VT03 806 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-208ENST00000472612 VASH1Q7L8A9 365 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-208ENST00000472612 NUTM2AQ8IVF1 878 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-208ENST00000472612 TRMT44Q8IYL2 757 aaKnown RBP11.46□□□□□ -0.57
PHTF1-208ENST00000472612 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
PHTF1-208ENST00000472612 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
PHTF1-208ENST00000472612 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.45□□□□□ -0.58
PHTF1-208ENST00000472612 QPCTQ16769 361 aa11.44□□□□□ -0.58
PHTF1-208ENST00000472612 TUSC1Q2TAM9 212 aa11.44□□□□□ -0.58
PHTF1-208ENST00000472612 SH3BP5LQ7L8J4 393 aa11.44□□□□□ -0.58
PHTF1-208ENST00000472612 CCDC116Q8IYX3 515 aa11.44□□□□□ -0.58
PHTF1-208ENST00000472612 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
PHTF1-208ENST00000472612 GSK3AP49840 483 aa11.43□□□□□ -0.58
PHTF1-208ENST00000472612 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
PHTF1-208ENST00000472612 MAGEB6P1A0A0J9YX57 407 aa11.42□□□□□ -0.58
PHTF1-208ENST00000472612 TTLL8A6PVC2 850 aa11.42□□□□□ -0.58
PHTF1-208ENST00000472612 LILRB3O75022 631 aa11.42□□□□□ -0.58
PHTF1-208ENST00000472612 CYB5RLQ6IPT4 315 aa11.42□□□□□ -0.58
PHTF1-208ENST00000472612 GPR161Q8N6U8 529 aaKnown RBP11.42□□□□□ -0.58
PHTF1-208ENST00000472612 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
PHTF1-208ENST00000472612 AK7Q96M32 723 aa11.42□□□□□ -0.58
PHTF1-208ENST00000472612 ARAP1Q96P48 1450 aa11.41□□□□□ -0.58
PHTF1-208ENST00000472612 KRT76Q01546 638 aa11.41□□□□□ -0.58
PHTF1-208ENST00000472612 KCTD17Q8N5Z5 321 aa11.41□□□□□ -0.58
PHTF1-208ENST00000472612 CNTNAP3BQ96NU0 1288 aa11.41□□□□□ -0.58
PHTF1-208ENST00000472612 CNTNAP3Q9BZ76 1288 aa11.41□□□□□ -0.58
PHTF1-208ENST00000472612 PTSQ03393 145 aa11.4□□□□□ -0.58
PHTF1-208ENST00000472612 SUZ12Q15022 739 aaKnown RBP11.4□□□□□ -0.58
PHTF1-208ENST00000472612 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
PHTF1-208ENST00000472612 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
PHTF1-208ENST00000472612 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
PHTF1-208ENST00000472612 TMEM151AQ8N4L1 468 aa11.37□□□□□ -0.59
PHTF1-208ENST00000472612 NANOS1Q8WY41 292 aaKnown RBP11.37□□□□□ -0.59
PHTF1-208ENST00000472612 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
PHTF1-208ENST00000472612 FIGNL2A6NMB9 653 aa11.36□□□□□ -0.59
PHTF1-208ENST00000472612 RNF225M0QZC1 329 aaPredicted RBP11.36□□□□□ -0.59
PHTF1-208ENST00000472612 ERFEQ4G0M1 354 aa11.36□□□□□ -0.59
PHTF1-208ENST00000472612 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
PHTF1-208ENST00000472612 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
PHTF1-208ENST00000472612 Q6ZVU0 165 aa11.36□□□□□ -0.59
PHTF1-208ENST00000472612 COL25A1Q9BXS0 654 aaPredicted RBP11.36□□□□□ -0.59
PHTF1-208ENST00000472612 ADAMTS8Q9UP79 889 aa11.36□□□□□ -0.59
PHTF1-208ENST00000472612 URB2Q14146 1524 aaKnown RBP11.35□□□□□ -0.59
PHTF1-208ENST00000472612 GDF11O95390 407 aa11.35□□□□□ -0.59
PHTF1-208ENST00000472612 RASSF7Q02833 373 aa11.35□□□□□ -0.59
PHTF1-208ENST00000472612 MROH2BQ7Z745 1585 aa11.34□□□□□ -0.59
PHTF1-208ENST00000472612 SPINT1O43278 529 aa11.34□□□□□ -0.59
PHTF1-208ENST00000472612 CBLBQ13191 982 aa11.34□□□□□ -0.59
PHTF1-208ENST00000472612 CCDC155Q8N6L0 562 aa11.34□□□□□ -0.59
PHTF1-208ENST00000472612 PDE4DQ08499 809 aa11.33□□□□□ -0.6
PHTF1-208ENST00000472612 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
PHTF1-208ENST00000472612 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
PHTF1-208ENST00000472612 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
PHTF1-208ENST00000472612 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
PHTF1-208ENST00000472612 CDV3Q9UKY7 258 aaKnown RBP11.31□□□□□ -0.6
PHTF1-208ENST00000472612 CFTRP13569 1480 aa11.31□□□□□ -0.6
PHTF1-208ENST00000472612 PDXDC2PQ6P474 469 aa11.3□□□□□ -0.6
PHTF1-208ENST00000472612 KCTD15Q96SI1 283 aaPredicted RBP11.3□□□□□ -0.6
PHTF1-208ENST00000472612 ARHGAP9Q9BRR9 750 aa11.3□□□□□ -0.6
PHTF1-208ENST00000472612 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
PHTF1-208ENST00000472612 DHX9Q08211 1270 aaKnown RBP11.29□□□□□ -0.6
PHTF1-208ENST00000472612 RNFT1Q5M7Z0 435 aa11.29□□□□□ -0.6
PHTF1-208ENST00000472612 SVOPQ8N4V2 548 aa11.29□□□□□ -0.6
PHTF1-208ENST00000472612 SLC10A4Q96EP9 437 aa11.29□□□□□ -0.6
PHTF1-208ENST00000472612 CTDSPL2Q05D32 466 aa11.28□□□□□ -0.6
PHTF1-208ENST00000472612 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
PHTF1-208ENST00000472612 ITGA6P23229 1130 aa11.27□□□□□ -0.61
PHTF1-208ENST00000472612 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
PHTF1-208ENST00000472612 FKBPLQ9UIM3 349 aa11.27□□□□□ -0.61
PHTF1-208ENST00000472612 SLURP2P0DP57 97 aa11.26□□□□□ -0.61
PHTF1-208ENST00000472612 VWA5B2Q8N398 1253 aa11.26□□□□□ -0.61
PHTF1-208ENST00000472612 CHD1O14646 1710 aa11.26□□□□□ -0.61
PHTF1-208ENST00000472612 CDC14CA4D256 554 aa11.25□□□□□ -0.61
PHTF1-208ENST00000472612 CTSOP43234 321 aaPredicted RBP11.25□□□□□ -0.61
PHTF1-208ENST00000472612 SV2AQ7L0J3 742 aa11.25□□□□□ -0.61
PHTF1-208ENST00000472612 ZBTB33Q86T24 672 aa11.25□□□□□ -0.61
PHTF1-208ENST00000472612 AGBL1Q96MI9 1066 aa11.25□□□□□ -0.61
PHTF1-208ENST00000472612 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
PHTF1-208ENST00000472612 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
PHTF1-208ENST00000472612 RELBQ01201 579 aa11.23□□□□□ -0.61
PHTF1-208ENST00000472612 INTS6LQ5JSJ4 861 aaKnown RBP11.23□□□□□ -0.61
PHTF1-208ENST00000472612 WHAMMQ8TF30 809 aa11.23□□□□□ -0.61
PHTF1-208ENST00000472612 INSM2Q96T92 566 aaPredicted RBP11.23□□□□□ -0.61
PHTF1-208ENST00000472612 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
PHTF1-208ENST00000472612 EIF4G3O43432 1585 aaKnown RBP11.22□□□□□ -0.61
PHTF1-208ENST00000472612 ARHGEF15O94989 841 aa11.22□□□□□ -0.61
PHTF1-208ENST00000472612 POLMQ9NP87 494 aaPredicted RBP11.22□□□□□ -0.61
PHTF1-208ENST00000472612 LRRN4Q8WUT4 740 aa11.21□□□□□ -0.61
PHTF1-208ENST00000472612 IRS1P35568 1242 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms