RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 DDB1Q16531 1140 aa15.63■□□□□ 0.09
SPC25-203ENST00000472216 LARP1Q6PKG0 1096 aaKnown RBP15.63■□□□□ 0.09
SPC25-203ENST00000472216 C10orf71Q711Q0 1435 aa15.62■□□□□ 0.09
SPC25-203ENST00000472216 RRAGCQ9HB90 399 aa15.62■□□□□ 0.09
SPC25-203ENST00000472216 WBP1LQ9NX94 342 aa15.61■□□□□ 0.09
SPC25-203ENST00000472216 PNPLA7Q6ZV29 1317 aa15.61■□□□□ 0.09
SPC25-203ENST00000472216 KIAA0232Q92628 1395 aa15.61■□□□□ 0.09
SPC25-203ENST00000472216 BCL9O00512 1426 aa15.6■□□□□ 0.09
SPC25-203ENST00000472216 HSPA8P11142 646 aaKnown RBP15.6■□□□□ 0.09
SPC25-203ENST00000472216 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
SPC25-203ENST00000472216 IQGAP3Q86VI3 1631 aa15.6■□□□□ 0.09
SPC25-203ENST00000472216 PARP4Q9UKK3 1724 aaKnown RBP15.6■□□□□ 0.09
SPC25-203ENST00000472216 TFCP2L1Q9NZI6 479 aa15.59■□□□□ 0.09
SPC25-203ENST00000472216 IGSF1Q8N6C5 1336 aa15.59■□□□□ 0.09
SPC25-203ENST00000472216 PXDNLA1KZ92 1463 aa15.58■□□□□ 0.08
SPC25-203ENST00000472216 PAPPAQ13219 1627 aa15.57■□□□□ 0.08
SPC25-203ENST00000472216 CREBZFQ9NS37 354 aa15.57■□□□□ 0.08
SPC25-203ENST00000472216 PHRF1Q9P1Y6 1649 aaKnown RBP15.56■□□□□ 0.08
SPC25-203ENST00000472216 NRXN1Q9ULB1 1477 aa15.55■□□□□ 0.08
SPC25-203ENST00000472216 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
SPC25-203ENST00000472216 HABP4Q5JVS0 413 aaKnown RBP15.55■□□□□ 0.08
SPC25-203ENST00000472216 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
SPC25-203ENST00000472216 PLEKHG2Q9H7P9 1386 aa15.54■□□□□ 0.08
SPC25-203ENST00000472216 SLC17A8Q8NDX2 589 aa15.54■□□□□ 0.08
SPC25-203ENST00000472216 CUL9Q8IWT3 2517 aa15.54■□□□□ 0.08
SPC25-203ENST00000472216 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
SPC25-203ENST00000472216 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.08
SPC25-203ENST00000472216 ZC3H6P61129 1189 aaKnown RBP15.52■□□□□ 0.08
SPC25-203ENST00000472216 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.08
SPC25-203ENST00000472216 CNTNAP1P78357 1384 aa15.51■□□□□ 0.07
SPC25-203ENST00000472216 WAPLQ7Z5K2 1190 aa15.51■□□□□ 0.07
SPC25-203ENST00000472216 KCPQ6ZWJ8 1503 aa15.51■□□□□ 0.07
SPC25-203ENST00000472216 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
SPC25-203ENST00000472216 QSER1Q2KHR3 1735 aa15.49■□□□□ 0.07
SPC25-203ENST00000472216 ARHGAP27Q6ZUM4 889 aa15.49■□□□□ 0.07
SPC25-203ENST00000472216 C9orf131Q5VYM1 1079 aa15.48■□□□□ 0.07
SPC25-203ENST00000472216 MSL1Q68DK7 614 aa15.48■□□□□ 0.07
SPC25-203ENST00000472216 FMN2Q9NZ56 1722 aa15.48■□□□□ 0.07
SPC25-203ENST00000472216 VEGFBP49765 207 aa15.47■□□□□ 0.07
SPC25-203ENST00000472216 MPNDQ8N594 471 aa15.47■□□□□ 0.07
SPC25-203ENST00000472216 GPRASP1Q5JY77 1395 aa15.47■□□□□ 0.07
SPC25-203ENST00000472216 ANKRD30BQ9BXX2 1392 aa15.47■□□□□ 0.07
SPC25-203ENST00000472216 MAP2K1Q02750 393 aaPredicted RBP15.46■□□□□ 0.07
SPC25-203ENST00000472216 MCOLN1Q9GZU1 580 aa15.46■□□□□ 0.07
SPC25-203ENST00000472216 SLC27A3Q5K4L6 730 aa15.45■□□□□ 0.06
SPC25-203ENST00000472216 VGFO15240 615 aaPredicted RBP15.44■□□□□ 0.06
SPC25-203ENST00000472216 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
SPC25-203ENST00000472216 VEGFAP15692 232 aaPredicted RBP15.44■□□□□ 0.06
SPC25-203ENST00000472216 ANKRD30AQ9BXX3 1397 aa15.44■□□□□ 0.06
SPC25-203ENST00000472216 LRRC37A3O60309 1634 aa15.43■□□□□ 0.06
SPC25-203ENST00000472216 ALS2Q96Q42 1657 aa15.43■□□□□ 0.06
SPC25-203ENST00000472216 CDCA7Q9BWT1 371 aaPredicted RBP15.42■□□□□ 0.06
SPC25-203ENST00000472216 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
SPC25-203ENST00000472216 FXR1P51114 621 aaKnown RBP eCLIP15.41■□□□□ 0.06
SPC25-203ENST00000472216 CRB1P82279 1406 aa15.41■□□□□ 0.06
SPC25-203ENST00000472216 COL23A1Q86Y22 540 aaPredicted RBP15.4■□□□□ 0.06
SPC25-203ENST00000472216 NBPF15Q8N660 670 aa15.4■□□□□ 0.06
SPC25-203ENST00000472216 STK26Q9P289 416 aa15.4■□□□□ 0.06
SPC25-203ENST00000472216 BCS1LQ9Y276 419 aa15.4■□□□□ 0.06
SPC25-203ENST00000472216 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
SPC25-203ENST00000472216 CRYBG1Q9Y4K1 1723 aa15.4■□□□□ 0.06
SPC25-203ENST00000472216 RGPD8O14715 1765 aaPredicted RBP15.39■□□□□ 0.05
SPC25-203ENST00000472216 SOX10P56693 466 aa15.39■□□□□ 0.05
SPC25-203ENST00000472216 ACSBG1Q96GR2 724 aa15.38■□□□□ 0.05
SPC25-203ENST00000472216 BEGAINQ9BUH8 593 aa15.38■□□□□ 0.05
SPC25-203ENST00000472216 CLTCL1P53675 1640 aa15.37■□□□□ 0.05
SPC25-203ENST00000472216 CHIC2Q9UKJ5 165 aa15.37■□□□□ 0.05
SPC25-203ENST00000472216 ACIN1Q9UKV3 1341 aaKnown RBP15.37■□□□□ 0.05
SPC25-203ENST00000472216 EXOC5O00471 708 aa15.36■□□□□ 0.05
SPC25-203ENST00000472216 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
SPC25-203ENST00000472216 AKAP12Q02952 1782 aa15.36■□□□□ 0.05
SPC25-203ENST00000472216 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
SPC25-203ENST00000472216 RNF181Q9P0P0 153 aa15.35■□□□□ 0.05
SPC25-203ENST00000472216 E9PCH4 1651 aa15.35■□□□□ 0.05
SPC25-203ENST00000472216 USP6P35125 1406 aa15.34■□□□□ 0.05
SPC25-203ENST00000472216 DGKZQ13574 1117 aa15.33■□□□□ 0.04
SPC25-203ENST00000472216 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.04
SPC25-203ENST00000472216 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
SPC25-203ENST00000472216 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
SPC25-203ENST00000472216 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
SPC25-203ENST00000472216 CPDO75976 1380 aa15.3■□□□□ 0.04
SPC25-203ENST00000472216 VIRMAQ69YN4 1812 aaKnown RBP15.29■□□□□ 0.04
SPC25-203ENST00000472216 KCNQ4P56696 695 aa15.29■□□□□ 0.04
SPC25-203ENST00000472216 ABCC11Q96J66 1382 aa15.28■□□□□ 0.04
SPC25-203ENST00000472216 FCHSD2O94868 740 aa15.28■□□□□ 0.04
SPC25-203ENST00000472216 MNX1P50219 401 aaPredicted RBP15.28■□□□□ 0.04
SPC25-203ENST00000472216 CHADLQ6NUI6 762 aa15.28■□□□□ 0.04
SPC25-203ENST00000472216 LMO7Q8WWI1 1683 aa15.28■□□□□ 0.04
SPC25-203ENST00000472216 DAPK1P53355 1430 aa15.27■□□□□ 0.04
SPC25-203ENST00000472216 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.04
SPC25-203ENST00000472216 GLTPD2A6NH11 291 aa15.27■□□□□ 0.04
SPC25-203ENST00000472216 TMEM88BA6NKF7 163 aa15.27■□□□□ 0.04
SPC25-203ENST00000472216 NUTM2GQ5VZR2 741 aa15.27■□□□□ 0.04
SPC25-203ENST00000472216 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.04
SPC25-203ENST00000472216 ANKRD50Q9ULJ7 1429 aa15.26■□□□□ 0.03
SPC25-203ENST00000472216 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
SPC25-203ENST00000472216 DEFB115Q30KQ5 88 aa15.26■□□□□ 0.03
SPC25-203ENST00000472216 FLAD1Q8NFF5 587 aa15.26■□□□□ 0.03
SPC25-203ENST00000472216 ANKARQ7Z5J8 1434 aa15.26■□□□□ 0.03
SPC25-203ENST00000472216 TRPM1Q7Z4N2 1603 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms