RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 THSD7AQ9UPZ6 1657 aa13.36□□□□□ -0.27
GGPS1-204ENST00000471812 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
GGPS1-204ENST00000471812 NFAT5O94916 1531 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 USP54Q70EL1 1684 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 SOX12O15370 315 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 GCP02774 474 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 NLRP6P59044 892 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 FAM182BQ5T319 152 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 NME9Q86XW9 330 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
GGPS1-204ENST00000471812 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
GGPS1-204ENST00000471812 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
GGPS1-204ENST00000471812 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
GGPS1-204ENST00000471812 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
GGPS1-204ENST00000471812 CLSPNQ9HAW4 1339 aa13.34□□□□□ -0.27
GGPS1-204ENST00000471812 CPDO75976 1380 aa13.33□□□□□ -0.27
GGPS1-204ENST00000471812 LTN1O94822 1766 aa13.33□□□□□ -0.28
GGPS1-204ENST00000471812 LARP1Q6PKG0 1096 aaKnown RBP13.33□□□□□ -0.28
GGPS1-204ENST00000471812 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
GGPS1-204ENST00000471812 FBLN1P23142 703 aa13.32□□□□□ -0.28
GGPS1-204ENST00000471812 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
GGPS1-204ENST00000471812 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
GGPS1-204ENST00000471812 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
GGPS1-204ENST00000471812 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
GGPS1-204ENST00000471812 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-204ENST00000471812 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-204ENST00000471812 BRD4O60885 1362 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-204ENST00000471812 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
GGPS1-204ENST00000471812 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
GGPS1-204ENST00000471812 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
GGPS1-204ENST00000471812 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
GGPS1-204ENST00000471812 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
GGPS1-204ENST00000471812 ARHGEF25Q86VW2 580 aa13.28□□□□□ -0.28
GGPS1-204ENST00000471812 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
GGPS1-204ENST00000471812 USP31Q70CQ4 1352 aa13.28□□□□□ -0.28
GGPS1-204ENST00000471812 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
GGPS1-204ENST00000471812 RGPD2P0DJD1 1756 aa13.27□□□□□ -0.28
GGPS1-204ENST00000471812 A0A0G2JS52 829 aa13.27□□□□□ -0.29
GGPS1-204ENST00000471812 MYT1Q01538 1121 aa13.27□□□□□ -0.29
GGPS1-204ENST00000471812 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
GGPS1-204ENST00000471812 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.29
GGPS1-204ENST00000471812 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
GGPS1-204ENST00000471812 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
GGPS1-204ENST00000471812 HSPA5P11021 654 aaKnown RBP13.26□□□□□ -0.29
GGPS1-204ENST00000471812 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
GGPS1-204ENST00000471812 TNS1Q9HBL0 1735 aaKnown RBP13.26□□□□□ -0.29
GGPS1-204ENST00000471812 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
GGPS1-204ENST00000471812 LRRC37A3O60309 1634 aa13.25□□□□□ -0.29
GGPS1-204ENST00000471812 KRT27Q7Z3Y8 459 aa13.25□□□□□ -0.29
GGPS1-204ENST00000471812 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
GGPS1-204ENST00000471812 DEFB132Q7Z7B7 95 aa13.25□□□□□ -0.29
GGPS1-204ENST00000471812 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
GGPS1-204ENST00000471812 CARD14Q9BXL6 1004 aa13.25□□□□□ -0.29
GGPS1-204ENST00000471812 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
GGPS1-204ENST00000471812 PARP4Q9UKK3 1724 aaKnown RBP13.25□□□□□ -0.29
GGPS1-204ENST00000471812 ANKRD36BQ8N2N9 1353 aa13.24□□□□□ -0.29
GGPS1-204ENST00000471812 EVA1CP58658 441 aa13.24□□□□□ -0.29
GGPS1-204ENST00000471812 TMF1P82094 1093 aa13.24□□□□□ -0.29
GGPS1-204ENST00000471812 PEAK1Q9H792 1746 aa13.23□□□□□ -0.29
GGPS1-204ENST00000471812 TERF2IPQ9NYB0 399 aa13.23□□□□□ -0.29
GGPS1-204ENST00000471812 CRB1P82279 1406 aa13.22□□□□□ -0.29
GGPS1-204ENST00000471812 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
GGPS1-204ENST00000471812 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
GGPS1-204ENST00000471812 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
GGPS1-204ENST00000471812 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
GGPS1-204ENST00000471812 SBF2Q86WG5 1849 aa13.21□□□□□ -0.29
GGPS1-204ENST00000471812 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
GGPS1-204ENST00000471812 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
GGPS1-204ENST00000471812 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
GGPS1-204ENST00000471812 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
GGPS1-204ENST00000471812 WDR17Q8IZU2 1322 aa13.2□□□□□ -0.3
GGPS1-204ENST00000471812 FYB1O15117 783 aa13.2□□□□□ -0.3
GGPS1-204ENST00000471812 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
GGPS1-204ENST00000471812 DISP2A7MBM2 1401 aa13.2□□□□□ -0.3
GGPS1-204ENST00000471812 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-204ENST00000471812 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
GGPS1-204ENST00000471812 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
GGPS1-204ENST00000471812 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
GGPS1-204ENST00000471812 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
GGPS1-204ENST00000471812 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
GGPS1-204ENST00000471812 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
GGPS1-204ENST00000471812 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
GGPS1-204ENST00000471812 ABCC6O95255 1503 aa13.18□□□□□ -0.3
GGPS1-204ENST00000471812 EIF4G2P78344 907 aaKnown RBP eCLIP13.17□□□□□ -0.3
GGPS1-204ENST00000471812 ERBB3P21860 1342 aa13.16□□□□□ -0.3
GGPS1-204ENST00000471812 ANKRD24Q8TF21 1146 aa13.16□□□□□ -0.3
GGPS1-204ENST00000471812 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-204ENST00000471812 SHANK3Q9BYB0 1731 aa13.16□□□□□ -0.3
GGPS1-204ENST00000471812 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
GGPS1-204ENST00000471812 TRIM37O94972 964 aa13.15□□□□□ -0.3
GGPS1-204ENST00000471812 CSB-PGBD3P0DP91 1061 aa13.15□□□□□ -0.3
GGPS1-204ENST00000471812 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
GGPS1-204ENST00000471812 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-204ENST00000471812 COG3Q96JB2 828 aa13.15□□□□□ -0.3
GGPS1-204ENST00000471812 ANKRD26Q9UPS8 1709 aa13.15□□□□□ -0.3
GGPS1-204ENST00000471812 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-204ENST00000471812 MARCH10Q8NA82 808 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-204ENST00000471812 CARD10Q9BWT7 1032 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms