RNA–Protein interactions for RNA: ENST00000471809.5

IFT27-208, Transcript of intraflagellar transport 27, humanhuman

TSL 5

Gene IFT27, Length 6,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-208ENST00000471809 MTHFSP49914 203 aa13.9□□□□□ -0.18
IFT27-208ENST00000471809 BCCIPQ9P287 314 aaKnown RBP eCLIP13.9□□□□□ -0.18
IFT27-208ENST00000471809 SART3Q15020 963 aaKnown RBP13.89□□□□□ -0.19
IFT27-208ENST00000471809 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
IFT27-208ENST00000471809 CWC27Q6UX04 472 aaKnown RBP13.89□□□□□ -0.19
IFT27-208ENST00000471809 TMCO3Q6UWJ1 677 aa13.89□□□□□ -0.19
IFT27-208ENST00000471809 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
IFT27-208ENST00000471809 GTF2F1P35269 517 aaKnown RBP eCLIP13.89□□□□□ -0.19
IFT27-208ENST00000471809 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
IFT27-208ENST00000471809 RNF187Q5TA31 235 aaPredicted RBP13.88□□□□□ -0.19
IFT27-208ENST00000471809 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
IFT27-208ENST00000471809 DDX54Q8TDD1 881 aaKnown RBP13.88□□□□□ -0.19
IFT27-208ENST00000471809 KRT85P78386 507 aa13.88□□□□□ -0.19
IFT27-208ENST00000471809 TMEM132EQ6IEE7 984 aa13.88□□□□□ -0.19
IFT27-208ENST00000471809 UPF3BQ9BZI7 483 aaKnown RBP13.88□□□□□ -0.19
IFT27-208ENST00000471809 UBXN4Q92575 508 aa13.87□□□□□ -0.19
IFT27-208ENST00000471809 SSBP05455 408 aaKnown RBP eCLIP13.87□□□□□ -0.19
IFT27-208ENST00000471809 PDCP20941 246 aa13.87□□□□□ -0.19
IFT27-208ENST00000471809 SSR1P43307 286 aaKnown RBP13.87□□□□□ -0.19
IFT27-208ENST00000471809 JAKMIP1Q96N16 626 aaKnown RBP13.87□□□□□ -0.19
IFT27-208ENST00000471809 CFAP45Q9UL16 551 aa13.87□□□□□ -0.19
IFT27-208ENST00000471809 CASQ1P31415 396 aa13.87□□□□□ -0.19
IFT27-208ENST00000471809 LARP6Q9BRS8 491 aaKnown RBP13.87□□□□□ -0.19
IFT27-208ENST00000471809 PDRG1Q9NUG6 133 aa13.87□□□□□ -0.19
IFT27-208ENST00000471809 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
IFT27-208ENST00000471809 TBC1D2BQ9UPU7 963 aa13.87□□□□□ -0.19
IFT27-208ENST00000471809 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
IFT27-208ENST00000471809 CCDC69A6NI79 296 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 CFAP100Q494V2 611 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 FERMT3Q86UX7 667 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 MCM2P49736 904 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 TWISTNBQ3B726 338 aaPredicted RBP13.86□□□□□ -0.19
IFT27-208ENST00000471809 MAP2K1Q02750 393 aaPredicted RBP13.86□□□□□ -0.19
IFT27-208ENST00000471809 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 CBFA2T2O43439 604 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 RAI14Q9P0K7 980 aa13.86□□□□□ -0.19
IFT27-208ENST00000471809 EPB41L2O43491 1005 aaKnown RBP13.85□□□□□ -0.19
IFT27-208ENST00000471809 URI1O94763 535 aaPredicted RBP13.85□□□□□ -0.19
IFT27-208ENST00000471809 GNAI2P04899 355 aa13.85□□□□□ -0.19
IFT27-208ENST00000471809 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
IFT27-208ENST00000471809 GBP2P32456 591 aaPredicted RBP13.85□□□□□ -0.19
IFT27-208ENST00000471809 C16orf45Q96MC5 204 aaPredicted RBP13.85□□□□□ -0.19
IFT27-208ENST00000471809 USP8P40818 1118 aa13.85□□□□□ -0.19
IFT27-208ENST00000471809 PRKAR2BP31323 418 aa13.85□□□□□ -0.19
IFT27-208ENST00000471809 CCDC184Q52MB2 194 aa13.85□□□□□ -0.19
IFT27-208ENST00000471809 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
IFT27-208ENST00000471809 ZNF526Q8TF50 670 aaPredicted RBP13.84□□□□□ -0.19
IFT27-208ENST00000471809 DACH1Q9UI36 760 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
IFT27-208ENST00000471809 PTPN14Q15678 1187 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 PPP2R1AP30153 589 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 CCDC30Q5VVM6 783 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 ZMYND15Q9H091 742 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 INCENPQ9NQS7 918 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 CNNM1Q9NRU3 951 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
IFT27-208ENST00000471809 FKBP4Q02790 459 aaKnown RBP eCLIP13.84□□□□□ -0.19
IFT27-208ENST00000471809 ARHGAP29Q52LW3 1261 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 GCC1Q96CN9 775 aa13.84□□□□□ -0.19
IFT27-208ENST00000471809 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 EIF5P55010 431 aaKnown RBP13.83□□□□□ -0.2
IFT27-208ENST00000471809 STIM1Q13586 685 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 CRACR2AQ9BSW2 395 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
IFT27-208ENST00000471809 KLHL10Q6JEL2 608 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 SMARCA5O60264 1052 aaPredicted RBP13.83□□□□□ -0.2
IFT27-208ENST00000471809 MYL6BP14649 208 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 ANKRD18AQ8IVF6 992 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 CCDC83Q8IWF9 413 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 NUTM1Q86Y26 1132 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 CPLX3Q8WVH0 158 aa13.83□□□□□ -0.2
IFT27-208ENST00000471809 GUCY1B3Q02153 619 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 RSPH4AQ5TD94 716 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 NF2P35240 595 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 UBE4AQ14139 1066 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 CEP57L1Q8IYX8 460 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 MATR3P43243 847 aaKnown RBP eCLIP13.82□□□□□ -0.2
IFT27-208ENST00000471809 MAP3K11Q16584 847 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 DHX8Q14562 1220 aaKnown RBP13.82□□□□□ -0.2
IFT27-208ENST00000471809 RAPGEF4Q8WZA2 1011 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 SERPINA10Q9UK55 444 aa13.82□□□□□ -0.2
IFT27-208ENST00000471809 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
IFT27-208ENST00000471809 JMYQ8N9B5 988 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 RBM27Q9P2N5 1060 aaKnown RBP13.81□□□□□ -0.2
IFT27-208ENST00000471809 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 GNAI3P08754 354 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 CCDC178Q5BJE1 867 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 AACSQ86V21 672 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
IFT27-208ENST00000471809 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
IFT27-208ENST00000471809 CKAP2LQ8IYA6 745 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 CLIP2Q9UDT6 1046 aa13.81□□□□□ -0.2
IFT27-208ENST00000471809 ATP2C2O75185 946 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms