RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 NFAT5O94916 1531 aa26.63■■□□□ 1.85
COMMD1-207ENST00000471704 PSDA5PKW4 1024 aaPredicted RBP26.62■■□□□ 1.85
COMMD1-207ENST00000471704 WDR17Q8IZU2 1322 aa26.62■■□□□ 1.85
COMMD1-207ENST00000471704 LRP5O75197 1615 aa26.61■■□□□ 1.85
COMMD1-207ENST00000471704 USP31Q70CQ4 1352 aa26.6■■□□□ 1.85
COMMD1-207ENST00000471704 APBA3O96018 575 aa26.6■■□□□ 1.85
COMMD1-207ENST00000471704 PUS7Q96PZ0 661 aaKnown RBP26.6■■□□□ 1.85
COMMD1-207ENST00000471704 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
COMMD1-207ENST00000471704 PARD3Q8TEW0 1356 aa26.59■■□□□ 1.85
COMMD1-207ENST00000471704 TOM1L2Q6ZVM7 507 aa26.59■■□□□ 1.85
COMMD1-207ENST00000471704 SLC12A5Q9H2X9 1139 aa26.59■■□□□ 1.85
COMMD1-207ENST00000471704 PEAK1Q9H792 1746 aa26.59■■□□□ 1.85
COMMD1-207ENST00000471704 WNK3Q9BYP7 1800 aa26.58■■□□□ 1.84
COMMD1-207ENST00000471704 USP47Q96K76 1375 aa26.58■■□□□ 1.84
COMMD1-207ENST00000471704 LRRC37A3O60309 1634 aa26.57■■□□□ 1.84
COMMD1-207ENST00000471704 C11orf95C9JLR9 678 aaPredicted RBP26.57■■□□□ 1.84
COMMD1-207ENST00000471704 A0A1W2PP64 1363 aa26.57■■□□□ 1.84
COMMD1-207ENST00000471704 ABCC6O95255 1503 aa26.56■■□□□ 1.84
COMMD1-207ENST00000471704 SOX12O15370 315 aa26.56■■□□□ 1.84
COMMD1-207ENST00000471704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.56■■□□□ 1.84
COMMD1-207ENST00000471704 LTN1O94822 1766 aa26.56■■□□□ 1.84
COMMD1-207ENST00000471704 RREB1Q92766 1687 aa26.55■■□□□ 1.84
COMMD1-207ENST00000471704 TMC1Q8TDI8 760 aa26.55■■□□□ 1.84
COMMD1-207ENST00000471704 SBF2Q86WG5 1849 aa26.54■■□□□ 1.84
COMMD1-207ENST00000471704 R3HDM1Q15032 1099 aaKnown RBP26.54■■□□□ 1.84
COMMD1-207ENST00000471704 DDB1Q16531 1140 aa26.54■■□□□ 1.84
COMMD1-207ENST00000471704 NME9Q86XW9 330 aa26.54■■□□□ 1.84
COMMD1-207ENST00000471704 CARD10Q9BWT7 1032 aa26.54■■□□□ 1.84
COMMD1-207ENST00000471704 HDGFL2Q7Z4V5 671 aaPredicted RBP26.53■■□□□ 1.84
COMMD1-207ENST00000471704 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
COMMD1-207ENST00000471704 TIMELESSQ9UNS1 1208 aa26.53■■□□□ 1.84
COMMD1-207ENST00000471704 OVOS2A0A0G2JMS6 1433 aa26.53■■□□□ 1.84
COMMD1-207ENST00000471704 OVOS2A0A0J9YW53 1432 aa26.53■■□□□ 1.84
COMMD1-207ENST00000471704 OVOS2Q6IE36 1432 aa26.53■■□□□ 1.84
COMMD1-207ENST00000471704 EDC4Q6P2E9 1401 aaKnown RBP26.53■■□□□ 1.84
COMMD1-207ENST00000471704 TERF2IPQ9NYB0 399 aa26.51■■□□□ 1.83
COMMD1-207ENST00000471704 MYOM1P52179 1685 aa26.5■■□□□ 1.83
COMMD1-207ENST00000471704 NUP188Q5SRE5 1749 aa26.5■■□□□ 1.83
COMMD1-207ENST00000471704 BCL9O00512 1426 aa26.48■■□□□ 1.83
COMMD1-207ENST00000471704 NINLQ9Y2I6 1382 aa26.48■■□□□ 1.83
COMMD1-207ENST00000471704 CSB-PGBD3P0DP91 1061 aa26.48■■□□□ 1.83
COMMD1-207ENST00000471704 MARCH10Q8NA82 808 aaPredicted RBP26.48■■□□□ 1.83
COMMD1-207ENST00000471704 CCDC7Q96M83 1385 aa26.46■■□□□ 1.83
COMMD1-207ENST00000471704 SLC24A1O60721 1099 aa26.45■■□□□ 1.82
COMMD1-207ENST00000471704 RGPD3A6NKT7 1758 aaPredicted RBP26.44■■□□□ 1.82
COMMD1-207ENST00000471704 RGPD4Q7Z3J3 1758 aa26.44■■□□□ 1.82
COMMD1-207ENST00000471704 BCL11BQ9C0K0 894 aaPredicted RBP26.44■■□□□ 1.82
COMMD1-207ENST00000471704 ERBB3P21860 1342 aa26.43■■□□□ 1.82
COMMD1-207ENST00000471704 PLSCR1O15162 318 aa26.43■■□□□ 1.82
COMMD1-207ENST00000471704 PTF1AQ7RTS3 328 aa26.43■■□□□ 1.82
COMMD1-207ENST00000471704 TMF1P82094 1093 aa26.42■■□□□ 1.82
COMMD1-207ENST00000471704 EXOC5O00471 708 aa26.41■■□□□ 1.82
COMMD1-207ENST00000471704 ANKRD36BQ8N2N9 1353 aa26.41■■□□□ 1.82
COMMD1-207ENST00000471704 KIF20BQ96Q89 1820 aa26.4■■□□□ 1.82
COMMD1-207ENST00000471704 NBPF14Q5TI25 921 aa26.4■■□□□ 1.82
COMMD1-207ENST00000471704 CCER1Q8TC90 406 aaPredicted RBP26.4■■□□□ 1.82
COMMD1-207ENST00000471704 TNS2Q63HR2 1409 aa26.38■■□□□ 1.81
COMMD1-207ENST00000471704 ANKRD24Q8TF21 1146 aa26.37■■□□□ 1.81
COMMD1-207ENST00000471704 NLRP2Q9NX02 1062 aa26.37■■□□□ 1.81
COMMD1-207ENST00000471704 PROM2Q8N271 834 aa26.35■■□□□ 1.81
COMMD1-207ENST00000471704 IP6K1Q92551 441 aa26.35■■□□□ 1.81
COMMD1-207ENST00000471704 IL2RBP14784 551 aa26.32■■□□□ 1.8
COMMD1-207ENST00000471704 COG3Q96JB2 828 aa26.31■■□□□ 1.8
COMMD1-207ENST00000471704 FAM208AQ9UK61 1670 aaKnown RBP26.31■■□□□ 1.8
COMMD1-207ENST00000471704 RGPD2P0DJD1 1756 aa26.3■■□□□ 1.8
COMMD1-207ENST00000471704 NHSQ6T4R5 1651 aa26.28■■□□□ 1.8
COMMD1-207ENST00000471704 KCNQ2O43526 872 aa26.28■■□□□ 1.8
COMMD1-207ENST00000471704 FBLN1P23142 703 aa26.28■■□□□ 1.8
COMMD1-207ENST00000471704 ANO8Q9HCE9 1232 aaPredicted RBP26.28■■□□□ 1.8
COMMD1-207ENST00000471704 MAP3K19Q56UN5 1328 aa26.28■■□□□ 1.8
COMMD1-207ENST00000471704 CDCA8Q53HL2 280 aa26.27■■□□□ 1.8
COMMD1-207ENST00000471704 FYB1O15117 783 aa26.26■■□□□ 1.79
COMMD1-207ENST00000471704 HOXC9P31274 260 aa26.25■■□□□ 1.79
COMMD1-207ENST00000471704 TXNRD1Q16881 649 aa26.25■■□□□ 1.79
COMMD1-207ENST00000471704 CARD14Q9BXL6 1004 aa26.25■■□□□ 1.79
COMMD1-207ENST00000471704 GGNBP2Q9H3C7 697 aa26.24■■□□□ 1.79
COMMD1-207ENST00000471704 CASZ1Q86V15 1759 aa26.23■■□□□ 1.79
COMMD1-207ENST00000471704 LTV1Q96GA3 475 aaPredicted RBP26.23■■□□□ 1.79
COMMD1-207ENST00000471704 KAT6BQ8WYB5 2073 aa26.23■■□□□ 1.79
COMMD1-207ENST00000471704 HSPA5P11021 654 aaKnown RBP26.22■■□□□ 1.79
COMMD1-207ENST00000471704 SPON1Q9HCB6 807 aa26.22■■□□□ 1.79
COMMD1-207ENST00000471704 NSD3Q9BZ95 1437 aa26.22■■□□□ 1.79
COMMD1-207ENST00000471704 AMPHP49418 695 aa26.21■■□□□ 1.79
COMMD1-207ENST00000471704 ACSBG1Q96GR2 724 aa26.21■■□□□ 1.79
COMMD1-207ENST00000471704 BTAF1O14981 1849 aa26.19■■□□□ 1.78
COMMD1-207ENST00000471704 EIF4G2P78344 907 aaKnown RBP eCLIP26.19■■□□□ 1.78
COMMD1-207ENST00000471704 ANKRD26Q9UPS8 1709 aa26.19■■□□□ 1.78
COMMD1-207ENST00000471704 RTL1A6NKG5 1358 aa26.19■■□□□ 1.78
COMMD1-207ENST00000471704 PDGFDQ9GZP0 370 aaPredicted RBP26.18■■□□□ 1.78
COMMD1-207ENST00000471704 SHANK3Q9BYB0 1731 aa26.17■■□□□ 1.78
COMMD1-207ENST00000471704 RRS1Q15050 365 aaKnown RBP26.17■■□□□ 1.78
COMMD1-207ENST00000471704 SLC15A2Q16348 729 aa26.15■■□□□ 1.78
COMMD1-207ENST00000471704 DDX54Q8TDD1 881 aaKnown RBP26.14■■□□□ 1.78
COMMD1-207ENST00000471704 STK32BQ9NY57 414 aa26.14■■□□□ 1.78
COMMD1-207ENST00000471704 MAP2P11137 1827 aaKnown RBP26.12■■□□□ 1.77
COMMD1-207ENST00000471704 NBPF6Q5VWK0 638 aa26.12■■□□□ 1.77
COMMD1-207ENST00000471704 NBPF4Q96M43 638 aa26.12■■□□□ 1.77
COMMD1-207ENST00000471704 PAPPAQ13219 1627 aa26.12■■□□□ 1.77
COMMD1-207ENST00000471704 MEGF6O75095 1541 aa26.11■■□□□ 1.77
COMMD1-207ENST00000471704 ZCRB1Q8TBF4 217 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms