RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 EMILIN1Q9Y6C2 1016 aa5.75□□□□□ -1.49
SCN3A-207ENST00000471697 CNTNAP5Q8WYK1 1306 aa5.74□□□□□ -1.49
SCN3A-207ENST00000471697 CDC14CA4D256 554 aa5.74□□□□□ -1.49
SCN3A-207ENST00000471697 FIGNL2A6NMB9 653 aa5.74□□□□□ -1.49
SCN3A-207ENST00000471697 BAG6P46379 1132 aa5.74□□□□□ -1.49
SCN3A-207ENST00000471697 C4orf48Q5BLP8 95 aa5.74□□□□□ -1.49
SCN3A-207ENST00000471697 C1QTNF2Q9BXJ5 285 aa5.74□□□□□ -1.49
SCN3A-207ENST00000471697 FAM217BQ9NTX9 383 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-207ENST00000471697 GAS6Q14393 721 aa5.73□□□□□ -1.49
SCN3A-207ENST00000471697 LYPD8Q6UX82 237 aa5.73□□□□□ -1.49
SCN3A-207ENST00000471697 Q6ZVU0 165 aa5.73□□□□□ -1.49
SCN3A-207ENST00000471697 BPHLQ86WA6 291 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-207ENST00000471697 IRF6O14896 467 aa5.72□□□□□ -1.49
SCN3A-207ENST00000471697 PODNQ7Z5L7 613 aa5.72□□□□□ -1.49
SCN3A-207ENST00000471697 NPM2Q86SE8 214 aaKnown RBP5.72□□□□□ -1.49
SCN3A-207ENST00000471697 GPIHBP1Q8IV16 184 aa5.72□□□□□ -1.49
SCN3A-207ENST00000471697 GPCPD1Q9NPB8 672 aa5.72□□□□□ -1.49
SCN3A-207ENST00000471697 LRRC4BQ9NT99 713 aa5.72□□□□□ -1.49
SCN3A-207ENST00000471697 TTBK1Q5TCY1 1321 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-207ENST00000471697 F12P00748 615 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-207ENST00000471697 FSHRP23945 695 aa5.71□□□□□ -1.5
SCN3A-207ENST00000471697 CTHP32929 405 aa5.71□□□□□ -1.5
SCN3A-207ENST00000471697 CLCN1P35523 988 aa5.71□□□□□ -1.5
SCN3A-207ENST00000471697 SH3RF1Q7Z6J0 888 aa5.71□□□□□ -1.5
SCN3A-207ENST00000471697 TRMT44Q8IYL2 757 aaKnown RBP5.71□□□□□ -1.5
SCN3A-207ENST00000471697 SENP3-EIF4A1A0A087X0R7 540 aa5.7□□□□□ -1.5
SCN3A-207ENST00000471697 MTMR2Q13614 643 aa5.7□□□□□ -1.5
SCN3A-207ENST00000471697 ALYREFQ86V81 257 aaKnown RBP5.7□□□□□ -1.5
SCN3A-207ENST00000471697 CCDC116Q8IYX3 515 aa5.7□□□□□ -1.5
SCN3A-207ENST00000471697 BCRP11274 1271 aa5.69□□□□□ -1.5
SCN3A-207ENST00000471697 AGERQ15109 404 aa5.68□□□□□ -1.5
SCN3A-207ENST00000471697 SPIRE2Q8WWL2 714 aa5.68□□□□□ -1.5
SCN3A-207ENST00000471697 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
SCN3A-207ENST00000471697 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
SCN3A-207ENST00000471697 MBIPQ9NS73 344 aa5.68□□□□□ -1.5
SCN3A-207ENST00000471697 MINK1Q8N4C8 1332 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-207ENST00000471697 KRBA1A5PL33 1030 aa5.67□□□□□ -1.5
SCN3A-207ENST00000471697 SUPT5HO00267 1087 aaKnown RBP5.67□□□□□ -1.5
SCN3A-207ENST00000471697 FURINP09958 794 aa5.67□□□□□ -1.5
SCN3A-207ENST00000471697 GJA5P36382 358 aa5.67□□□□□ -1.5
SCN3A-207ENST00000471697 VASH1Q7L8A9 365 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-207ENST00000471697 PGPEP1Q9NXJ5 209 aa5.67□□□□□ -1.5
SCN3A-207ENST00000471697 MAP10Q9P2G4 905 aa5.67□□□□□ -1.5
SCN3A-207ENST00000471697 MOXD2PA6NHM9 499 aa5.66□□□□□ -1.5
SCN3A-207ENST00000471697 NDUFV2P19404 249 aa5.66□□□□□ -1.5
SCN3A-207ENST00000471697 CTSOP43234 321 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-207ENST00000471697 TRIM26Q12899 539 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-207ENST00000471697 CBLBQ13191 982 aa5.66□□□□□ -1.5
SCN3A-207ENST00000471697 NEDD1Q8NHV4 660 aa5.66□□□□□ -1.5
SCN3A-207ENST00000471697 GMCL1Q96IK5 515 aa5.66□□□□□ -1.5
SCN3A-207ENST00000471697 BTBD11A6QL63 1104 aa5.65□□□□□ -1.5
SCN3A-207ENST00000471697 PPP1R26Q5T8A7 1209 aaPredicted RBP5.65□□□□□ -1.5
SCN3A-207ENST00000471697 RNF217Q8TC41 542 aa5.65□□□□□ -1.5
SCN3A-207ENST00000471697 IGF1RP08069 1367 aa5.65□□□□□ -1.51
SCN3A-207ENST00000471697 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
SCN3A-207ENST00000471697 SH3BP5LQ7L8J4 393 aa5.64□□□□□ -1.51
SCN3A-207ENST00000471697 ARMC2Q8NEN0 867 aa5.64□□□□□ -1.51
SCN3A-207ENST00000471697 CUEDC1Q9NWM3 386 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-207ENST00000471697 CCDC102AQ96A19 550 aa5.63□□□□□ -1.51
SCN3A-207ENST00000471697 ACDQ96AP0 544 aa5.63□□□□□ -1.51
SCN3A-207ENST00000471697 CFAP99D6REC4 459 aa5.62□□□□□ -1.51
SCN3A-207ENST00000471697 HRCP23327 699 aa5.62□□□□□ -1.51
SCN3A-207ENST00000471697 ITGB7P26010 798 aa5.62□□□□□ -1.51
SCN3A-207ENST00000471697 INSM2Q96T92 566 aaPredicted RBP5.62□□□□□ -1.51
SCN3A-207ENST00000471697 UBTFP17480 764 aaKnown RBP5.61□□□□□ -1.51
SCN3A-207ENST00000471697 NBPF14Q5TI25 921 aa5.61□□□□□ -1.51
SCN3A-207ENST00000471697 TRIM22Q8IYM9 498 aa5.61□□□□□ -1.51
SCN3A-207ENST00000471697 ZNF837Q96EG3 531 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-207ENST00000471697 OIP5O43482 229 aa5.6□□□□□ -1.51
SCN3A-207ENST00000471697 COL8A1P27658 744 aa5.6□□□□□ -1.51
SCN3A-207ENST00000471697 POLMQ9NP87 494 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-207ENST00000471697 SSTR3P32745 418 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-207ENST00000471697 SNRPNP63162 240 aaKnown RBP5.59□□□□□ -1.51
SCN3A-207ENST00000471697 DHX9Q08211 1270 aaKnown RBP5.59□□□□□ -1.51
SCN3A-207ENST00000471697 FOXR1Q6PIV2 292 aa5.59□□□□□ -1.51
SCN3A-207ENST00000471697 AGBL1Q96MI9 1066 aa5.59□□□□□ -1.51
SCN3A-207ENST00000471697 MKL2Q9ULH7 1088 aa5.59□□□□□ -1.51
SCN3A-207ENST00000471697 FOXD4L5Q5VV16 416 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-207ENST00000471697 RSBN1LQ6PCB5 846 aaPredicted RBP5.58□□□□□ -1.52
SCN3A-207ENST00000471697 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
SCN3A-207ENST00000471697 GPKOWQ92917 476 aaPredicted RBP eCLIP5.58□□□□□ -1.52
SCN3A-207ENST00000471697 CDV3Q9UKY7 258 aaKnown RBP5.58□□□□□ -1.52
SCN3A-207ENST00000471697 RELBQ01201 579 aa5.57□□□□□ -1.52
SCN3A-207ENST00000471697 ERFEQ4G0M1 354 aa5.57□□□□□ -1.52
SCN3A-207ENST00000471697 PRPF38BQ5VTL8 546 aaKnown RBP5.57□□□□□ -1.52
SCN3A-207ENST00000471697 KRI1Q8N9T8 703 aaKnown RBP5.57□□□□□ -1.52
SCN3A-207ENST00000471697 PER1O15534 1290 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-207ENST00000471697 ZMYM1Q5SVZ6 1142 aa5.56□□□□□ -1.52
SCN3A-207ENST00000471697 LYSMD3Q7Z3D4 306 aa5.56□□□□□ -1.52
SCN3A-207ENST00000471697 ZBTB3Q9H5J0 574 aa5.56□□□□□ -1.52
SCN3A-207ENST00000471697 NSFL1CQ9UNZ2 370 aaKnown RBP5.56□□□□□ -1.52
SCN3A-207ENST00000471697 MAGEB6P1A0A0J9YX57 407 aa5.55□□□□□ -1.52
SCN3A-207ENST00000471697 GPR25O00155 361 aa5.55□□□□□ -1.52
SCN3A-207ENST00000471697 DIXDC1Q155Q3 683 aa5.55□□□□□ -1.52
SCN3A-207ENST00000471697 DBN1Q16643 649 aa5.55□□□□□ -1.52
SCN3A-207ENST00000471697 KCTD15Q96SI1 283 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-207ENST00000471697 PCDHB15Q9Y5E8 787 aa5.55□□□□□ -1.52
SCN3A-207ENST00000471697 H7C1W4 665 aa5.54□□□□□ -1.52
SCN3A-207ENST00000471697 ZNF395Q9H8N7 513 aaPredicted RBP5.54□□□□□ -1.52
SCN3A-207ENST00000471697 C1QTNF9BB2RNN3 333 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms