RNA–Protein interactions for RNA: ENST00000471303.6

PAX6-215, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,423 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-215ENST00000471303 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
PAX6-215ENST00000471303 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
PAX6-215ENST00000471303 PTPN23Q9H3S7 1636 aa16.62■□□□□ 0.25
PAX6-215ENST00000471303 TDO2P48775 406 aa16.62■□□□□ 0.25
PAX6-215ENST00000471303 ENOX1Q8TC92 643 aaKnown RBP16.62■□□□□ 0.25
PAX6-215ENST00000471303 DHX38Q92620 1227 aaKnown RBP16.62■□□□□ 0.25
PAX6-215ENST00000471303 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
PAX6-215ENST00000471303 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
PAX6-215ENST00000471303 NPAS4Q8IUM7 802 aa16.61■□□□□ 0.25
PAX6-215ENST00000471303 VRTNQ9H8Y1 702 aa16.61■□□□□ 0.25
PAX6-215ENST00000471303 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
PAX6-215ENST00000471303 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
PAX6-215ENST00000471303 NBPF10Q6P3W6 841 aaKnown RBP16.6■□□□□ 0.25
PAX6-215ENST00000471303 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
PAX6-215ENST00000471303 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
PAX6-215ENST00000471303 PCMTD1Q96MG8 357 aaPredicted RBP16.59■□□□□ 0.25
PAX6-215ENST00000471303 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
PAX6-215ENST00000471303 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
PAX6-215ENST00000471303 SMYD5Q6GMV2 418 aa16.59■□□□□ 0.25
PAX6-215ENST00000471303 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
PAX6-215ENST00000471303 GLMNQ92990 594 aa16.59■□□□□ 0.25
PAX6-215ENST00000471303 PAGR1Q9BTK6 254 aa16.59■□□□□ 0.25
PAX6-215ENST00000471303 HFM1A2PYH4 1435 aa16.59■□□□□ 0.25
PAX6-215ENST00000471303 C9orf131Q5VYM1 1079 aa16.58■□□□□ 0.25
PAX6-215ENST00000471303 NAIPQ13075 1403 aa16.58■□□□□ 0.25
PAX6-215ENST00000471303 FAM200BP0CF97 657 aa16.58■□□□□ 0.24
PAX6-215ENST00000471303 FMNL3Q8IVF7 1028 aa16.58■□□□□ 0.24
PAX6-215ENST00000471303 QTRT2Q9H974 415 aaKnown RBP16.58■□□□□ 0.24
PAX6-215ENST00000471303 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
PAX6-215ENST00000471303 VGLL3A8MV65 326 aa16.57■□□□□ 0.24
PAX6-215ENST00000471303 POU5F1Q01860 360 aaKnown RBP16.57■□□□□ 0.24
PAX6-215ENST00000471303 SRPK2P78362 688 aaKnown RBP16.57■□□□□ 0.24
PAX6-215ENST00000471303 CCAR1Q8IX12 1150 aaKnown RBP16.57■□□□□ 0.24
PAX6-215ENST00000471303 ZNF512BQ96KM6 892 aaPredicted RBP16.57■□□□□ 0.24
PAX6-215ENST00000471303 MS4A1P11836 297 aa16.56■□□□□ 0.24
PAX6-215ENST00000471303 BSDC1Q9NW68 430 aaPredicted RBP16.56■□□□□ 0.24
PAX6-215ENST00000471303 PDILTQ8N807 584 aa16.56■□□□□ 0.24
PAX6-215ENST00000471303 TERF1P54274 439 aa16.55■□□□□ 0.24
PAX6-215ENST00000471303 LRRC27Q9C0I9 530 aa16.55■□□□□ 0.24
PAX6-215ENST00000471303 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
PAX6-215ENST00000471303 DDX27Q96GQ7 796 aaKnown RBP16.55■□□□□ 0.24
PAX6-215ENST00000471303 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
PAX6-215ENST00000471303 IL17RAQ96F46 866 aa16.54■□□□□ 0.24
PAX6-215ENST00000471303 RSPH9Q9H1X1 276 aaPredicted RBP16.54■□□□□ 0.24
PAX6-215ENST00000471303 SFMBT1Q9UHJ3 866 aa16.54■□□□□ 0.24
PAX6-215ENST00000471303 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
PAX6-215ENST00000471303 TANGO6Q9C0B7 1094 aa16.54■□□□□ 0.24
PAX6-215ENST00000471303 TMEM88BA6NKF7 163 aa16.53■□□□□ 0.24
PAX6-215ENST00000471303 ZRSR2Q15696 482 aaKnown RBP16.53■□□□□ 0.24
PAX6-215ENST00000471303 GNEQ9Y223 722 aaKnown RBP16.53■□□□□ 0.24
PAX6-215ENST00000471303 ZNF644Q9H582 1327 aaPredicted RBP16.53■□□□□ 0.24
PAX6-215ENST00000471303 IBSPP21815 317 aaPredicted RBP16.53■□□□□ 0.24
PAX6-215ENST00000471303 ERCC5P28715 1186 aaPredicted RBP16.53■□□□□ 0.24
PAX6-215ENST00000471303 SPC25Q9HBM1 224 aa16.52■□□□□ 0.24
PAX6-215ENST00000471303 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
PAX6-215ENST00000471303 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
PAX6-215ENST00000471303 MYCBPQ99417 103 aaPredicted RBP16.51■□□□□ 0.23
PAX6-215ENST00000471303 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
PAX6-215ENST00000471303 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
PAX6-215ENST00000471303 MAP2K1Q02750 393 aaPredicted RBP16.51■□□□□ 0.23
PAX6-215ENST00000471303 NT5DC4Q86YG4 428 aa16.51■□□□□ 0.23
PAX6-215ENST00000471303 COL4A3BPQ9Y5P4 624 aa16.51■□□□□ 0.23
PAX6-215ENST00000471303 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
PAX6-215ENST00000471303 MLLT3P42568 568 aaPredicted RBP16.5■□□□□ 0.23
PAX6-215ENST00000471303 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
PAX6-215ENST00000471303 IQSEC3Q9UPP2 1182 aaPredicted RBP16.5■□□□□ 0.23
PAX6-215ENST00000471303 KDM6BO15054 1643 aa16.5■□□□□ 0.23
PAX6-215ENST00000471303 BMS1Q14692 1282 aaKnown RBP16.5■□□□□ 0.23
PAX6-215ENST00000471303 TRIM52Q96A61 297 aa16.49■□□□□ 0.23
PAX6-215ENST00000471303 RPAINQ86UA6 219 aa16.48■□□□□ 0.23
PAX6-215ENST00000471303 DMGDHQ9UI17 866 aaKnown RBP16.48■□□□□ 0.23
PAX6-215ENST00000471303 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
PAX6-215ENST00000471303 IGHDP01880 384 aa16.48■□□□□ 0.23
PAX6-215ENST00000471303 SF3B2Q13435 895 aaKnown RBP16.48■□□□□ 0.23
PAX6-215ENST00000471303 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
PAX6-215ENST00000471303 MAP9Q49MG5 647 aa16.47■□□□□ 0.23
PAX6-215ENST00000471303 SNRKQ9NRH2 765 aa16.47■□□□□ 0.23
PAX6-215ENST00000471303 C7P10643 843 aa16.47■□□□□ 0.23
PAX6-215ENST00000471303 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
PAX6-215ENST00000471303 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
PAX6-215ENST00000471303 RSPH1Q8WYR4 309 aa16.47■□□□□ 0.23
PAX6-215ENST00000471303 SSR1P43307 286 aaKnown RBP16.46■□□□□ 0.23
PAX6-215ENST00000471303 SYNPO2Q9UMS6 1093 aa16.46■□□□□ 0.23
PAX6-215ENST00000471303 DIS3Q9Y2L1 958 aaKnown RBP16.46■□□□□ 0.23
PAX6-215ENST00000471303 JAZF1Q86VZ6 243 aa16.46■□□□□ 0.23
PAX6-215ENST00000471303 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
PAX6-215ENST00000471303 TTC39BQ5VTQ0 682 aaPredicted RBP16.45■□□□□ 0.22
PAX6-215ENST00000471303 PCDH12Q9NPG4 1184 aa16.45■□□□□ 0.22
PAX6-215ENST00000471303 SCINQ9Y6U3 715 aa16.45■□□□□ 0.22
PAX6-215ENST00000471303 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
PAX6-215ENST00000471303 DHX8Q14562 1220 aaKnown RBP16.45■□□□□ 0.22
PAX6-215ENST00000471303 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
PAX6-215ENST00000471303 PCGF5Q86SE9 256 aa16.45■□□□□ 0.22
PAX6-215ENST00000471303 CEP63Q96MT8 703 aa16.45■□□□□ 0.22
PAX6-215ENST00000471303 NUP160Q12769 1436 aa16.44■□□□□ 0.22
PAX6-215ENST00000471303 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
PAX6-215ENST00000471303 VDRP11473 427 aa16.44■□□□□ 0.22
PAX6-215ENST00000471303 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
PAX6-215ENST00000471303 CD53P19397 219 aa16.44■□□□□ 0.22
PAX6-215ENST00000471303 BORCS6Q96GS4 357 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms