RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
SMNDC1-204ENST00000471297 L3MBTL2Q969R5 705 aa8.64□□□□□ -1.03
SMNDC1-204ENST00000471297 LRCH3Q96II8 777 aa8.64□□□□□ -1.03
SMNDC1-204ENST00000471297 RICTORQ6R327 1708 aa8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 PPRC1Q5VV67 1664 aaKnown RBP8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 SOWAHBA6NEL2 793 aa8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 SULF1Q8IWU6 871 aa8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 SLF2Q8IX21 1173 aa8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 KCTD12Q96CX2 325 aaKnown RBP8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 ZMYM4Q5VZL5 1548 aa8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 ATP10AO60312 1499 aa8.63□□□□□ -1.03
SMNDC1-204ENST00000471297 DEPDC5O75140 1603 aa8.62□□□□□ -1.03
SMNDC1-204ENST00000471297 VWDEQ8N2E2 1590 aa8.62□□□□□ -1.03
SMNDC1-204ENST00000471297 MS4A1P11836 297 aa8.62□□□□□ -1.03
SMNDC1-204ENST00000471297 BCAMP50895 628 aa8.62□□□□□ -1.03
SMNDC1-204ENST00000471297 CCDC144AA2RUR9 1427 aa8.62□□□□□ -1.03
SMNDC1-204ENST00000471297 KIF13AQ9H1H9 1805 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 PRDM15P57071 1507 aaPredicted RBP8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 LMTK2Q8IWU2 1503 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 RNF40O75150 1001 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 SLC10A3P09131 477 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 PPP4CP60510 307 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 FRMPD1Q5SYB0 1578 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 DIP2CQ9Y2E4 1556 aa8.61□□□□□ -1.03
SMNDC1-204ENST00000471297 BCORL1Q5H9F3 1711 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 TSPOAP1O95153 1857 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 CD46P15529 392 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 GGT6Q6P531 493 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 IL27Q8NEV9 243 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 ABCA6Q8N139 1617 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 RNF17Q9BXT8 1623 aaKnown RBP8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 PTPRTO14522 1441 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 YEATS2Q9ULM3 1422 aa8.6□□□□□ -1.03
SMNDC1-204ENST00000471297 TET3O43151 1660 aa8.59□□□□□ -1.03
SMNDC1-204ENST00000471297 PLA2R1Q13018 1463 aa8.59□□□□□ -1.03
SMNDC1-204ENST00000471297 THSD4Q6ZMP0 1018 aa8.59□□□□□ -1.03
SMNDC1-204ENST00000471297 BEGAINQ9BUH8 593 aa8.59□□□□□ -1.03
SMNDC1-204ENST00000471297 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
SMNDC1-204ENST00000471297 MROH1Q8NDA8 1641 aa8.58□□□□□ -1.04
SMNDC1-204ENST00000471297 WASHC2CQ9Y4E1 1318 aa8.58□□□□□ -1.04
SMNDC1-204ENST00000471297 REREQ9P2R6 1566 aa8.58□□□□□ -1.04
SMNDC1-204ENST00000471297 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
SMNDC1-204ENST00000471297 HPS5Q9UPZ3 1129 aa8.58□□□□□ -1.04
SMNDC1-204ENST00000471297 AGLP35573 1532 aa8.58□□□□□ -1.04
SMNDC1-204ENST00000471297 UHRF1BP1Q6BDS2 1440 aa8.57□□□□□ -1.04
SMNDC1-204ENST00000471297 PTPN5P54829 565 aa8.57□□□□□ -1.04
SMNDC1-204ENST00000471297 NECTIN2Q92692 538 aa8.57□□□□□ -1.04
SMNDC1-204ENST00000471297 COL17A1Q9UMD9 1497 aaPredicted RBP8.57□□□□□ -1.04
SMNDC1-204ENST00000471297 E9PCH4 1651 aa8.56□□□□□ -1.04
SMNDC1-204ENST00000471297 GCGRP47871 477 aa8.56□□□□□ -1.04
SMNDC1-204ENST00000471297 NBPF8Q3BBV2 869 aa8.56□□□□□ -1.04
SMNDC1-204ENST00000471297 DCAF11Q8TEB1 546 aa8.56□□□□□ -1.04
SMNDC1-204ENST00000471297 DDRGK1Q96HY6 314 aa8.56□□□□□ -1.04
SMNDC1-204ENST00000471297 WBP1LQ9NX94 342 aa8.56□□□□□ -1.04
SMNDC1-204ENST00000471297 ARHGAP31Q2M1Z3 1444 aa8.55□□□□□ -1.04
SMNDC1-204ENST00000471297 TRPM2O94759 1503 aa8.55□□□□□ -1.04
SMNDC1-204ENST00000471297 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMNDC1-204ENST00000471297 RNF166Q96A37 237 aaPredicted RBP8.55□□□□□ -1.04
SMNDC1-204ENST00000471297 ABCC3O15438 1527 aa8.54□□□□□ -1.04
SMNDC1-204ENST00000471297 EFCAB6Q5THR3 1501 aa8.54□□□□□ -1.04
SMNDC1-204ENST00000471297 RGL3Q3MIN7 710 aa8.54□□□□□ -1.04
SMNDC1-204ENST00000471297 NUTM1Q86Y26 1132 aa8.54□□□□□ -1.04
SMNDC1-204ENST00000471297 CNTLNQ9NXG0 1405 aa8.54□□□□□ -1.04
SMNDC1-204ENST00000471297 NEURL4Q96JN8 1562 aa8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 PLEKHG3A1L390 1219 aa8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 CFHP08603 1231 aa8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 MMRN1Q13201 1228 aa8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 NPATQ14207 1427 aa8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 SPATA31E1Q6ZUB1 1445 aa8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 ZC3H13Q5T200 1668 aaKnown RBP8.53□□□□□ -1.04
SMNDC1-204ENST00000471297 SPHKAPQ2M3C7 1700 aa8.52□□□□□ -1.05
SMNDC1-204ENST00000471297 KDM4AO75164 1064 aa8.52□□□□□ -1.05
SMNDC1-204ENST00000471297 HSPA5P11021 654 aaKnown RBP8.52□□□□□ -1.05
SMNDC1-204ENST00000471297 SPIRE2Q8WWL2 714 aa8.52□□□□□ -1.05
SMNDC1-204ENST00000471297 ARHGEF40Q8TER5 1519 aa8.52□□□□□ -1.05
SMNDC1-204ENST00000471297 NOS1P29475 1434 aa8.52□□□□□ -1.05
SMNDC1-204ENST00000471297 APLP1P51693 650 aa8.51□□□□□ -1.05
SMNDC1-204ENST00000471297 ZNF326Q5BKZ1 582 aaKnown RBP8.51□□□□□ -1.05
SMNDC1-204ENST00000471297 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
SMNDC1-204ENST00000471297 ESF1Q9H501 851 aaKnown RBP8.51□□□□□ -1.05
SMNDC1-204ENST00000471297 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
SMNDC1-204ENST00000471297 CEP152O94986 1710 aa8.51□□□□□ -1.05
SMNDC1-204ENST00000471297 RPGRIP1LQ68CZ1 1315 aa8.51□□□□□ -1.05
SMNDC1-204ENST00000471297 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 PRAG1Q86YV5 1406 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 PRR14Q9BWN1 585 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 HCSTQ9UBK5 93 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 CLTCL1P53675 1640 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 CAMSAP1Q5T5Y3 1602 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 RALGAPBQ86X10 1494 aa8.5□□□□□ -1.05
SMNDC1-204ENST00000471297 FUT2Q10981 343 aa8.49□□□□□ -1.05
SMNDC1-204ENST00000471297 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
SMNDC1-204ENST00000471297 CARD11Q9BXL7 1154 aa8.49□□□□□ -1.05
SMNDC1-204ENST00000471297 ATP6V1AP38606 617 aa8.48□□□□□ -1.05
SMNDC1-204ENST00000471297 USP46P62068 366 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms