RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CPDO75976 1380 aa12.36□□□□□ -0.43
PTPRE-207ENST00000471218 ACEP12821 1306 aa12.36□□□□□ -0.43
PTPRE-207ENST00000471218 ITSN1Q15811 1721 aa12.35□□□□□ -0.43
PTPRE-207ENST00000471218 SRPK2P78362 688 aaKnown RBP12.35□□□□□ -0.43
PTPRE-207ENST00000471218 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
PTPRE-207ENST00000471218 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
PTPRE-207ENST00000471218 USP35Q9P2H5 1018 aa12.35□□□□□ -0.43
PTPRE-207ENST00000471218 THSD7AQ9UPZ6 1657 aa12.34□□□□□ -0.43
PTPRE-207ENST00000471218 GCP02774 474 aa12.33□□□□□ -0.44
PTPRE-207ENST00000471218 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
PTPRE-207ENST00000471218 CDCA7Q9BWT1 371 aaPredicted RBP12.33□□□□□ -0.44
PTPRE-207ENST00000471218 SPON1Q9HCB6 807 aa12.33□□□□□ -0.44
PTPRE-207ENST00000471218 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
PTPRE-207ENST00000471218 PPP1R1BQ9UD71 204 aaPredicted RBP12.33□□□□□ -0.44
PTPRE-207ENST00000471218 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
PTPRE-207ENST00000471218 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
PTPRE-207ENST00000471218 CPSF1Q10570 1443 aaKnown RBP12.31□□□□□ -0.44
PTPRE-207ENST00000471218 PLSCR1O15162 318 aa12.31□□□□□ -0.44
PTPRE-207ENST00000471218 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
PTPRE-207ENST00000471218 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
PTPRE-207ENST00000471218 TMC1Q8TDI8 760 aa12.31□□□□□ -0.44
PTPRE-207ENST00000471218 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
PTPRE-207ENST00000471218 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
PTPRE-207ENST00000471218 USP19O94966 1318 aa12.31□□□□□ -0.44
PTPRE-207ENST00000471218 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
PTPRE-207ENST00000471218 EDC4Q6P2E9 1401 aaKnown RBP12.3□□□□□ -0.44
PTPRE-207ENST00000471218 CD163L1Q9NR16 1453 aa12.3□□□□□ -0.44
PTPRE-207ENST00000471218 CARD14Q9BXL6 1004 aa12.3□□□□□ -0.44
PTPRE-207ENST00000471218 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
PTPRE-207ENST00000471218 KCNQ2O43526 872 aa12.29□□□□□ -0.44
PTPRE-207ENST00000471218 YY1P25490 414 aa12.29□□□□□ -0.44
PTPRE-207ENST00000471218 DDB1Q16531 1140 aa12.29□□□□□ -0.44
PTPRE-207ENST00000471218 KCNH5Q8NCM2 988 aa12.29□□□□□ -0.44
PTPRE-207ENST00000471218 CRB1P82279 1406 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 PPIP5K1Q6PFW1 1433 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 NLRP6P59044 892 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 AATKQ6ZMQ8 1374 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 CRYBG1Q9Y4K1 1723 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
PTPRE-207ENST00000471218 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.45
PTPRE-207ENST00000471218 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
PTPRE-207ENST00000471218 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
PTPRE-207ENST00000471218 TNS1Q9HBL0 1735 aaKnown RBP12.27□□□□□ -0.45
PTPRE-207ENST00000471218 CAMTA1Q9Y6Y1 1673 aa12.26□□□□□ -0.45
PTPRE-207ENST00000471218 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
PTPRE-207ENST00000471218 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
PTPRE-207ENST00000471218 PHRF1Q9P1Y6 1649 aaKnown RBP12.26□□□□□ -0.45
PTPRE-207ENST00000471218 NGEFQ8N5V2 710 aa12.25□□□□□ -0.45
PTPRE-207ENST00000471218 CABP1Q9NZU7 370 aa12.25□□□□□ -0.45
PTPRE-207ENST00000471218 COL5A2P05997 1499 aaPredicted RBP12.24□□□□□ -0.45
PTPRE-207ENST00000471218 BCL9O00512 1426 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 EXOC5O00471 708 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 MORC1Q86VD1 984 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 ANKRD26Q9UPS8 1709 aa12.23□□□□□ -0.45
PTPRE-207ENST00000471218 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
PTPRE-207ENST00000471218 USP6P35125 1406 aa12.22□□□□□ -0.45
PTPRE-207ENST00000471218 ZBTB7CA1YPR0 619 aa12.22□□□□□ -0.45
PTPRE-207ENST00000471218 CARD10Q9BWT7 1032 aa12.22□□□□□ -0.45
PTPRE-207ENST00000471218 CSB-PGBD3P0DP91 1061 aa12.21□□□□□ -0.45
PTPRE-207ENST00000471218 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
PTPRE-207ENST00000471218 STK32BQ9NY57 414 aa12.21□□□□□ -0.45
PTPRE-207ENST00000471218 LMO7Q8WWI1 1683 aa12.21□□□□□ -0.45
PTPRE-207ENST00000471218 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
PTPRE-207ENST00000471218 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
PTPRE-207ENST00000471218 RREB1Q92766 1687 aa12.2□□□□□ -0.46
PTPRE-207ENST00000471218 FYB1O15117 783 aa12.2□□□□□ -0.46
PTPRE-207ENST00000471218 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
PTPRE-207ENST00000471218 NCBP3Q53F19 620 aaKnown RBP12.2□□□□□ -0.46
PTPRE-207ENST00000471218 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
PTPRE-207ENST00000471218 CFAP53Q96M91 514 aa12.2□□□□□ -0.46
PTPRE-207ENST00000471218 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
PTPRE-207ENST00000471218 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
PTPRE-207ENST00000471218 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
PTPRE-207ENST00000471218 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
PTPRE-207ENST00000471218 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTPRE-207ENST00000471218 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
PTPRE-207ENST00000471218 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
PTPRE-207ENST00000471218 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
PTPRE-207ENST00000471218 SLIT3O75094 1523 aa12.17□□□□□ -0.46
PTPRE-207ENST00000471218 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
PTPRE-207ENST00000471218 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPRE-207ENST00000471218 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
PTPRE-207ENST00000471218 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
PTPRE-207ENST00000471218 SLC15A2Q16348 729 aa12.16□□□□□ -0.46
PTPRE-207ENST00000471218 TXNRD1Q16881 649 aa12.16□□□□□ -0.46
PTPRE-207ENST00000471218 MARCH10Q8NA82 808 aaPredicted RBP12.16□□□□□ -0.46
PTPRE-207ENST00000471218 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
PTPRE-207ENST00000471218 KIF24Q5T7B8 1368 aa12.16□□□□□ -0.46
PTPRE-207ENST00000471218 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
PTPRE-207ENST00000471218 COG3Q96JB2 828 aa12.15□□□□□ -0.46
PTPRE-207ENST00000471218 PROM2Q8N271 834 aa12.14□□□□□ -0.47
PTPRE-207ENST00000471218 ABCC6O95255 1503 aa12.13□□□□□ -0.47
PTPRE-207ENST00000471218 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms