RNA–Protein interactions for RNA: ENST00000471027.1

SCG5-204, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-204ENST00000471027 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
SCG5-204ENST00000471027 SLIT3O75094 1523 aa12.56□□□□□ -0.4
SCG5-204ENST00000471027 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
SCG5-204ENST00000471027 EXOC5O00471 708 aa12.55□□□□□ -0.4
SCG5-204ENST00000471027 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
SCG5-204ENST00000471027 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
SCG5-204ENST00000471027 RGPD1P0DJD0 1748 aa12.54□□□□□ -0.4
SCG5-204ENST00000471027 ABCC6O95255 1503 aa12.54□□□□□ -0.4
SCG5-204ENST00000471027 BRWD3Q6RI45 1802 aa12.54□□□□□ -0.4
SCG5-204ENST00000471027 PLSCR1O15162 318 aa12.54□□□□□ -0.4
SCG5-204ENST00000471027 EDC4Q6P2E9 1401 aaKnown RBP12.54□□□□□ -0.4
SCG5-204ENST00000471027 HMGB2P26583 209 aaKnown RBP12.53□□□□□ -0.4
SCG5-204ENST00000471027 EZH2Q15910 746 aaKnown RBP12.53□□□□□ -0.4
SCG5-204ENST00000471027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCG5-204ENST00000471027 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
SCG5-204ENST00000471027 LMO7Q8WWI1 1683 aa12.53□□□□□ -0.4
SCG5-204ENST00000471027 BCL9O00512 1426 aa12.53□□□□□ -0.4
SCG5-204ENST00000471027 TMF1P82094 1093 aa12.52□□□□□ -0.41
SCG5-204ENST00000471027 R3HDM1Q15032 1099 aaKnown RBP12.52□□□□□ -0.41
SCG5-204ENST00000471027 CLSPNQ9HAW4 1339 aa12.52□□□□□ -0.41
SCG5-204ENST00000471027 PSDA5PKW4 1024 aaPredicted RBP12.51□□□□□ -0.41
SCG5-204ENST00000471027 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
SCG5-204ENST00000471027 SOX12O15370 315 aa12.51□□□□□ -0.41
SCG5-204ENST00000471027 SLC12A5Q9H2X9 1139 aa12.51□□□□□ -0.41
SCG5-204ENST00000471027 AXIN2Q9Y2T1 843 aa12.51□□□□□ -0.41
SCG5-204ENST00000471027 COG3Q96JB2 828 aa12.5□□□□□ -0.41
SCG5-204ENST00000471027 ERBB3P21860 1342 aa12.49□□□□□ -0.41
SCG5-204ENST00000471027 ST20-MTHFSA0A0A6YYL1 179 aa12.49□□□□□ -0.41
SCG5-204ENST00000471027 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
SCG5-204ENST00000471027 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
SCG5-204ENST00000471027 IL2RBP14784 551 aa12.48□□□□□ -0.41
SCG5-204ENST00000471027 NME9Q86XW9 330 aa12.48□□□□□ -0.41
SCG5-204ENST00000471027 SPON1Q9HCB6 807 aa12.47□□□□□ -0.41
SCG5-204ENST00000471027 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
SCG5-204ENST00000471027 LRP5O75197 1615 aa12.47□□□□□ -0.41
SCG5-204ENST00000471027 PARP4Q9UKK3 1724 aaKnown RBP12.46□□□□□ -0.41
SCG5-204ENST00000471027 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.41
SCG5-204ENST00000471027 IP6K1Q92551 441 aa12.46□□□□□ -0.41
SCG5-204ENST00000471027 TESK2Q96S53 571 aa12.46□□□□□ -0.41
SCG5-204ENST00000471027 PPP1R1BQ9UD71 204 aaPredicted RBP12.46□□□□□ -0.41
SCG5-204ENST00000471027 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
SCG5-204ENST00000471027 AMPHP49418 695 aa12.45□□□□□ -0.42
SCG5-204ENST00000471027 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
SCG5-204ENST00000471027 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
SCG5-204ENST00000471027 NFAT5O94916 1531 aa12.44□□□□□ -0.42
SCG5-204ENST00000471027 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
SCG5-204ENST00000471027 CGNL1Q0VF96 1302 aa12.43□□□□□ -0.42
SCG5-204ENST00000471027 KCNQ2O43526 872 aa12.43□□□□□ -0.42
SCG5-204ENST00000471027 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
SCG5-204ENST00000471027 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
SCG5-204ENST00000471027 USP47Q96K76 1375 aa12.43□□□□□ -0.42
SCG5-204ENST00000471027 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
SCG5-204ENST00000471027 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
SCG5-204ENST00000471027 SMG6Q86US8 1419 aaKnown RBP12.42□□□□□ -0.42
SCG5-204ENST00000471027 RTL1A6NKG5 1358 aa12.42□□□□□ -0.42
SCG5-204ENST00000471027 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
SCG5-204ENST00000471027 TXNRD1Q16881 649 aa12.41□□□□□ -0.42
SCG5-204ENST00000471027 MON2Q7Z3U7 1717 aa12.41□□□□□ -0.42
SCG5-204ENST00000471027 COL18A1P39060 1754 aa12.4□□□□□ -0.42
SCG5-204ENST00000471027 HOXC9P31274 260 aa12.39□□□□□ -0.43
SCG5-204ENST00000471027 SLC27A3Q5K4L6 730 aa12.39□□□□□ -0.43
SCG5-204ENST00000471027 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
SCG5-204ENST00000471027 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
SCG5-204ENST00000471027 MAP3K19Q56UN5 1328 aa12.38□□□□□ -0.43
SCG5-204ENST00000471027 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
SCG5-204ENST00000471027 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
SCG5-204ENST00000471027 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
SCG5-204ENST00000471027 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
SCG5-204ENST00000471027 FYB1O15117 783 aa12.37□□□□□ -0.43
SCG5-204ENST00000471027 DDX54Q8TDD1 881 aaKnown RBP12.37□□□□□ -0.43
SCG5-204ENST00000471027 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
SCG5-204ENST00000471027 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
SCG5-204ENST00000471027 MTFR1LQ9H019 292 aa12.36□□□□□ -0.43
SCG5-204ENST00000471027 PEAK1Q9H792 1746 aa12.36□□□□□ -0.43
SCG5-204ENST00000471027 PROM2Q8N271 834 aa12.35□□□□□ -0.43
SCG5-204ENST00000471027 SLC16A10Q8TF71 515 aa12.35□□□□□ -0.43
SCG5-204ENST00000471027 PCGF6Q9BYE7 350 aa12.35□□□□□ -0.43
SCG5-204ENST00000471027 RREB1Q92766 1687 aa12.35□□□□□ -0.43
SCG5-204ENST00000471027 FLT4P35916 1363 aa12.34□□□□□ -0.43
SCG5-204ENST00000471027 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
SCG5-204ENST00000471027 ACSBG1Q96GR2 724 aa12.34□□□□□ -0.43
SCG5-204ENST00000471027 GGNBP2Q9H3C7 697 aa12.34□□□□□ -0.43
SCG5-204ENST00000471027 INSRP06213 1382 aa12.33□□□□□ -0.44
SCG5-204ENST00000471027 EIF4G2P78344 907 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCG5-204ENST00000471027 SYTL4Q96C24 671 aaPredicted RBP12.33□□□□□ -0.44
SCG5-204ENST00000471027 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
SCG5-204ENST00000471027 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
SCG5-204ENST00000471027 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
SCG5-204ENST00000471027 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
SCG5-204ENST00000471027 POLD1P28340 1107 aa12.31□□□□□ -0.44
SCG5-204ENST00000471027 RRS1Q15050 365 aaKnown RBP12.31□□□□□ -0.44
SCG5-204ENST00000471027 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
SCG5-204ENST00000471027 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
SCG5-204ENST00000471027 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
SCG5-204ENST00000471027 PTF1AQ7RTS3 328 aa12.3□□□□□ -0.44
SCG5-204ENST00000471027 CCER1Q8TC90 406 aaPredicted RBP12.3□□□□□ -0.44
SCG5-204ENST00000471027 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
SCG5-204ENST00000471027 NBPF6Q5VWK0 638 aa12.29□□□□□ -0.44
SCG5-204ENST00000471027 FLAD1Q8NFF5 587 aa12.29□□□□□ -0.44
SCG5-204ENST00000471027 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms