RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 WFS1O76024 890 aa11.43□□□□□ -0.58
SSB-209ENST00000470621 ALDH1A1P00352 501 aa11.43□□□□□ -0.58
SSB-209ENST00000470621 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
SSB-209ENST00000470621 A6NJR5 290 aa11.42□□□□□ -0.58
SSB-209ENST00000470621 SLC10A4Q96EP9 437 aa11.42□□□□□ -0.58
SSB-209ENST00000470621 PCDHB9Q9Y5E1 797 aa11.42□□□□□ -0.58
SSB-209ENST00000470621 C14orf37Q86TY3 774 aa11.41□□□□□ -0.58
SSB-209ENST00000470621 CDK15Q96Q40 435 aa11.41□□□□□ -0.58
SSB-209ENST00000470621 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
SSB-209ENST00000470621 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
SSB-209ENST00000470621 VASH1Q7L8A9 365 aaPredicted RBP11.39□□□□□ -0.59
SSB-209ENST00000470621 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
SSB-209ENST00000470621 ATP13A2Q9NQ11 1180 aa11.39□□□□□ -0.59
SSB-209ENST00000470621 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
SSB-209ENST00000470621 FSHRP23945 695 aa11.38□□□□□ -0.59
SSB-209ENST00000470621 GRM5P41594 1212 aa11.38□□□□□ -0.59
SSB-209ENST00000470621 MPNDQ8N594 471 aa11.38□□□□□ -0.59
SSB-209ENST00000470621 ZMYND15Q9H091 742 aa11.38□□□□□ -0.59
SSB-209ENST00000470621 ZNF330Q9Y3S2 320 aaPredicted RBP11.38□□□□□ -0.59
SSB-209ENST00000470621 MAP4K5Q9Y4K4 846 aa11.38□□□□□ -0.59
SSB-209ENST00000470621 ADH1CP00326 375 aa11.37□□□□□ -0.59
SSB-209ENST00000470621 NR3C2P08235 984 aa11.36□□□□□ -0.59
SSB-209ENST00000470621 ADAMTS19Q8TE59 1207 aa11.36□□□□□ -0.59
SSB-209ENST00000470621 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
SSB-209ENST00000470621 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
SSB-209ENST00000470621 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
SSB-209ENST00000470621 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
SSB-209ENST00000470621 WIPF1O43516 503 aa11.34□□□□□ -0.59
SSB-209ENST00000470621 TRAK2O60296 914 aa11.34□□□□□ -0.59
SSB-209ENST00000470621 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSB-209ENST00000470621 NNTQ13423 1086 aa11.34□□□□□ -0.59
SSB-209ENST00000470621 INTS6LQ5JSJ4 861 aaKnown RBP11.34□□□□□ -0.59
SSB-209ENST00000470621 HPS1Q92902 700 aa11.34□□□□□ -0.59
SSB-209ENST00000470621 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
SSB-209ENST00000470621 GIGYF1O75420 1035 aaPredicted RBP11.33□□□□□ -0.6
SSB-209ENST00000470621 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
SSB-209ENST00000470621 RAB15P59190 212 aa11.33□□□□□ -0.6
SSB-209ENST00000470621 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
SSB-209ENST00000470621 ALG2Q9H553 416 aa11.32□□□□□ -0.6
SSB-209ENST00000470621 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
SSB-209ENST00000470621 ESPNB1AK53 854 aa11.31□□□□□ -0.6
SSB-209ENST00000470621 NR5A1Q13285 461 aa11.3□□□□□ -0.6
SSB-209ENST00000470621 CEP126Q9P2H0 1117 aa11.3□□□□□ -0.6
SSB-209ENST00000470621 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
SSB-209ENST00000470621 TERTO14746 1132 aaKnown RBP11.29□□□□□ -0.6
SSB-209ENST00000470621 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
SSB-209ENST00000470621 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
SSB-209ENST00000470621 STK17AQ9UEE5 414 aa11.29□□□□□ -0.6
SSB-209ENST00000470621 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
SSB-209ENST00000470621 HDGFL1Q5TGJ6 251 aa11.28□□□□□ -0.6
SSB-209ENST00000470621 CCDC116Q8IYX3 515 aa11.28□□□□□ -0.6
SSB-209ENST00000470621 GLMNQ92990 594 aa11.28□□□□□ -0.6
SSB-209ENST00000470621 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
SSB-209ENST00000470621 SOX11P35716 441 aa11.27□□□□□ -0.61
SSB-209ENST00000470621 MCCD1P59942 119 aaPredicted RBP11.27□□□□□ -0.61
SSB-209ENST00000470621 KLF16Q9BXK1 252 aaPredicted RBP11.27□□□□□ -0.61
SSB-209ENST00000470621 TMPRSS4Q9NRS4 437 aa11.27□□□□□ -0.61
SSB-209ENST00000470621 ERVH48-1M5A8F1 160 aa11.26□□□□□ -0.61
SSB-209ENST00000470621 LCE2CQ5TA81 110 aa11.26□□□□□ -0.61
SSB-209ENST00000470621 ITPKCQ96DU7 683 aa11.26□□□□□ -0.61
SSB-209ENST00000470621 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
SSB-209ENST00000470621 TIMP2P16035 220 aa11.25□□□□□ -0.61
SSB-209ENST00000470621 WDR4P57081 412 aaKnown RBP11.25□□□□□ -0.61
SSB-209ENST00000470621 TSGA10IPQ3SY00 556 aa11.25□□□□□ -0.61
SSB-209ENST00000470621 PPP1R26Q5T8A7 1209 aaPredicted RBP11.25□□□□□ -0.61
SSB-209ENST00000470621 PHTF2Q8N3S3 785 aa11.25□□□□□ -0.61
SSB-209ENST00000470621 CCDC85AQ96PX6 553 aaPredicted RBP11.25□□□□□ -0.61
SSB-209ENST00000470621 UCN2Q96RP3 112 aa11.25□□□□□ -0.61
SSB-209ENST00000470621 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
SSB-209ENST00000470621 ZNF592Q92610 1267 aa11.24□□□□□ -0.61
SSB-209ENST00000470621 ZIC2O95409 532 aaPredicted RBP11.23□□□□□ -0.61
SSB-209ENST00000470621 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
SSB-209ENST00000470621 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
SSB-209ENST00000470621 RNF135Q8IUD6 432 aa11.22□□□□□ -0.61
SSB-209ENST00000470621 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
SSB-209ENST00000470621 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
SSB-209ENST00000470621 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
SSB-209ENST00000470621 DHX9Q08211 1270 aaKnown RBP11.2□□□□□ -0.62
SSB-209ENST00000470621 PCDHB11Q9Y5F2 797 aa11.2□□□□□ -0.62
SSB-209ENST00000470621 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
SSB-209ENST00000470621 CAPN5O15484 640 aaPredicted RBP11.19□□□□□ -0.62
SSB-209ENST00000470621 SCTRP47872 440 aa11.19□□□□□ -0.62
SSB-209ENST00000470621 CBLBQ13191 982 aa11.19□□□□□ -0.62
SSB-209ENST00000470621 RNF20Q5VTR2 975 aa11.19□□□□□ -0.62
SSB-209ENST00000470621 TBC1D9Q6ZT07 1266 aa11.19□□□□□ -0.62
SSB-209ENST00000470621 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
SSB-209ENST00000470621 CYLDQ9NQC7 956 aa11.19□□□□□ -0.62
SSB-209ENST00000470621 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
SSB-209ENST00000470621 LILRA1O75019 489 aa11.18□□□□□ -0.62
SSB-209ENST00000470621 PLPP7Q8NBV4 271 aa11.18□□□□□ -0.62
SSB-209ENST00000470621 BMP1P13497 986 aa11.17□□□□□ -0.62
SSB-209ENST00000470621 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
SSB-209ENST00000470621 DOLKQ9UPQ8 538 aa11.17□□□□□ -0.62
SSB-209ENST00000470621 SKIP12755 728 aa11.16□□□□□ -0.62
SSB-209ENST00000470621 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
SSB-209ENST00000470621 ERICH6Q7L0X2 663 aa11.16□□□□□ -0.62
SSB-209ENST00000470621 OXLD1Q5BKU9 147 aa11.15□□□□□ -0.62
SSB-209ENST00000470621 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
SSB-209ENST00000470621 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
SSB-209ENST00000470621 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms