RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 GCP02774 474 aa11.02□□□□□ -0.65
GTF3A-206ENST00000470606 HOXC9P31274 260 aa11.02□□□□□ -0.65
GTF3A-206ENST00000470606 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
GTF3A-206ENST00000470606 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
GTF3A-206ENST00000470606 SUPT16HQ9Y5B9 1047 aaKnown RBP11.02□□□□□ -0.65
GTF3A-206ENST00000470606 NPHP3Q7Z494 1330 aa11.02□□□□□ -0.65
GTF3A-206ENST00000470606 PHRF1Q9P1Y6 1649 aaKnown RBP11.02□□□□□ -0.65
GTF3A-206ENST00000470606 FCHSD2O94868 740 aa11.01□□□□□ -0.65
GTF3A-206ENST00000470606 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
GTF3A-206ENST00000470606 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
GTF3A-206ENST00000470606 RGPD2P0DJD1 1756 aa11.01□□□□□ -0.65
GTF3A-206ENST00000470606 RGPD5Q99666 1765 aa11.01□□□□□ -0.65
GTF3A-206ENST00000470606 CABLES1Q8TDN4 633 aa11.01□□□□□ -0.65
GTF3A-206ENST00000470606 SOS2Q07890 1332 aaPredicted RBP11.01□□□□□ -0.65
GTF3A-206ENST00000470606 SPATA31A3Q5VYP0 1347 aa11.01□□□□□ -0.65
GTF3A-206ENST00000470606 TNS3Q68CZ2 1445 aa11□□□□□ -0.65
GTF3A-206ENST00000470606 NHSL1Q5SYE7 1610 aa11□□□□□ -0.65
GTF3A-206ENST00000470606 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
GTF3A-206ENST00000470606 AMPHP49418 695 aa11□□□□□ -0.65
GTF3A-206ENST00000470606 PDE3BQ13370 1112 aa11□□□□□ -0.65
GTF3A-206ENST00000470606 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
GTF3A-206ENST00000470606 ARHGEF25Q86VW2 580 aa11□□□□□ -0.65
GTF3A-206ENST00000470606 TRMT2AQ8IZ69 625 aaKnown RBP11□□□□□ -0.65
GTF3A-206ENST00000470606 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
GTF3A-206ENST00000470606 EYA1Q99502 592 aa10.99□□□□□ -0.65
GTF3A-206ENST00000470606 AXIN2Q9Y2T1 843 aa10.99□□□□□ -0.65
GTF3A-206ENST00000470606 SLFN5Q08AF3 891 aa10.99□□□□□ -0.65
GTF3A-206ENST00000470606 SULT6B1Q6IMI4 303 aa10.99□□□□□ -0.65
GTF3A-206ENST00000470606 KIF24Q5T7B8 1368 aa10.99□□□□□ -0.65
GTF3A-206ENST00000470606 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 KCNH5Q8NCM2 988 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 IP6K1Q92551 441 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 IGSF1Q8N6C5 1336 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 COL18A1P39060 1754 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 ROBO1Q9Y6N7 1651 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 RTL1A6NKG5 1358 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 KDRP35968 1356 aa10.98□□□□□ -0.65
GTF3A-206ENST00000470606 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
GTF3A-206ENST00000470606 ZC3H6P61129 1189 aaKnown RBP10.97□□□□□ -0.65
GTF3A-206ENST00000470606 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
GTF3A-206ENST00000470606 ARHGEF10O15013 1369 aa10.96□□□□□ -0.65
GTF3A-206ENST00000470606 NGEFQ8N5V2 710 aa10.96□□□□□ -0.65
GTF3A-206ENST00000470606 ABCA3Q99758 1704 aa10.96□□□□□ -0.66
GTF3A-206ENST00000470606 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.66
GTF3A-206ENST00000470606 MAPK8IP3Q9UPT6 1336 aa10.96□□□□□ -0.66
GTF3A-206ENST00000470606 ZBTB7CA1YPR0 619 aa10.96□□□□□ -0.66
GTF3A-206ENST00000470606 RIPK4P57078 832 aa10.96□□□□□ -0.66
GTF3A-206ENST00000470606 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.66
GTF3A-206ENST00000470606 NBPF6Q5VWK0 638 aa10.96□□□□□ -0.66
GTF3A-206ENST00000470606 NBPF4Q96M43 638 aa10.96□□□□□ -0.66
GTF3A-206ENST00000470606 IRX6P78412 446 aaPredicted RBP10.95□□□□□ -0.66
GTF3A-206ENST00000470606 USHBP1Q8N6Y0 703 aa10.95□□□□□ -0.66
GTF3A-206ENST00000470606 LRRC59Q96AG4 307 aaKnown RBP10.95□□□□□ -0.66
GTF3A-206ENST00000470606 NFE2L2Q16236 605 aa10.94□□□□□ -0.66
GTF3A-206ENST00000470606 THUMPD2Q9BTF0 503 aaKnown RBP10.94□□□□□ -0.66
GTF3A-206ENST00000470606 FAM83GA6ND36 823 aa10.94□□□□□ -0.66
GTF3A-206ENST00000470606 WDR63Q8IWG1 891 aa10.94□□□□□ -0.66
GTF3A-206ENST00000470606 E9PSI1 815 aa10.93□□□□□ -0.66
GTF3A-206ENST00000470606 FKBP8Q14318 412 aa10.93□□□□□ -0.66
GTF3A-206ENST00000470606 CHRNA2Q15822 529 aa10.93□□□□□ -0.66
GTF3A-206ENST00000470606 RCAN3Q9UKA8 241 aa10.93□□□□□ -0.66
GTF3A-206ENST00000470606 KIAA0232Q92628 1395 aa10.93□□□□□ -0.66
GTF3A-206ENST00000470606 NCAPD2Q15021 1401 aa10.92□□□□□ -0.66
GTF3A-206ENST00000470606 PNNQ9H307 717 aaKnown RBP10.92□□□□□ -0.66
GTF3A-206ENST00000470606 CAMTA1Q9Y6Y1 1673 aa10.92□□□□□ -0.66
GTF3A-206ENST00000470606 AHDC1Q5TGY3 1603 aaPredicted RBP10.92□□□□□ -0.66
GTF3A-206ENST00000470606 DCTN1Q14203 1278 aa10.92□□□□□ -0.66
GTF3A-206ENST00000470606 MTHFSDQ2M296 383 aaKnown RBP10.92□□□□□ -0.66
GTF3A-206ENST00000470606 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
GTF3A-206ENST00000470606 LMO7Q8WWI1 1683 aa10.92□□□□□ -0.66
GTF3A-206ENST00000470606 CPDO75976 1380 aa10.91□□□□□ -0.66
GTF3A-206ENST00000470606 ERBB3P21860 1342 aa10.91□□□□□ -0.66
GTF3A-206ENST00000470606 TSR2Q969E8 191 aaKnown RBP10.91□□□□□ -0.66
GTF3A-206ENST00000470606 FAM208AQ9UK61 1670 aaKnown RBP10.9□□□□□ -0.67
GTF3A-206ENST00000470606 COL16A1Q07092 1604 aaPredicted RBP10.89□□□□□ -0.67
GTF3A-206ENST00000470606 FANCIQ9NVI1 1328 aa10.89□□□□□ -0.67
GTF3A-206ENST00000470606 PLIN1O60240 522 aa10.88□□□□□ -0.67
GTF3A-206ENST00000470606 ZNF853P0CG23 659 aa10.88□□□□□ -0.67
GTF3A-206ENST00000470606 MCM10Q7L590 875 aa10.88□□□□□ -0.67
GTF3A-206ENST00000470606 PIP4K2BP78356 416 aa10.88□□□□□ -0.67
GTF3A-206ENST00000470606 IL16Q14005 1332 aa10.87□□□□□ -0.67
GTF3A-206ENST00000470606 PHLPP1O60346 1717 aa10.87□□□□□ -0.67
GTF3A-206ENST00000470606 ABCC6O95255 1503 aa10.87□□□□□ -0.67
GTF3A-206ENST00000470606 BCAR3O75815 825 aa10.87□□□□□ -0.67
GTF3A-206ENST00000470606 NEFMP07197 916 aa10.87□□□□□ -0.67
GTF3A-206ENST00000470606 RRP1P56182 461 aaKnown RBP10.87□□□□□ -0.67
GTF3A-206ENST00000470606 COL22A1Q8NFW1 1626 aaPredicted RBP10.87□□□□□ -0.67
GTF3A-206ENST00000470606 CRB1P82279 1406 aa10.86□□□□□ -0.67
GTF3A-206ENST00000470606 EXOSC9Q06265 439 aaKnown RBP10.86□□□□□ -0.67
GTF3A-206ENST00000470606 PRDM11Q9NQV5 511 aa10.86□□□□□ -0.67
GTF3A-206ENST00000470606 VIRMAQ69YN4 1812 aaKnown RBP10.85□□□□□ -0.67
GTF3A-206ENST00000470606 TOM1O60784 492 aa10.85□□□□□ -0.67
GTF3A-206ENST00000470606 C20orf194Q5TEA3 1177 aa10.85□□□□□ -0.67
GTF3A-206ENST00000470606 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
GTF3A-206ENST00000470606 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
GTF3A-206ENST00000470606 LRRC37A3O60309 1634 aa10.85□□□□□ -0.67
GTF3A-206ENST00000470606 COL5A2P05997 1499 aaPredicted RBP10.84□□□□□ -0.67
GTF3A-206ENST00000470606 MEGF6O75095 1541 aa10.84□□□□□ -0.67
GTF3A-206ENST00000470606 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
GTF3A-206ENST00000470606 NEFLP07196 543 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms