RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 NFAT5O94916 1531 aa44.27■■■■■ 4.68
HMG20B-209ENST00000470356 USP31Q70CQ4 1352 aa44.27■■■■■ 4.68
HMG20B-209ENST00000470356 RGPD5Q99666 1765 aa44.26■■■■■ 4.68
HMG20B-209ENST00000470356 HDGFL2Q7Z4V5 671 aaPredicted RBP44.26■■■■■ 4.68
HMG20B-209ENST00000470356 TESK2Q96S53 571 aa44.23■■■■■ 4.67
HMG20B-209ENST00000470356 ST20-MTHFSA0A0A6YYL1 179 aa44.22■■■■■ 4.67
HMG20B-209ENST00000470356 CAMKK2Q96RR4 588 aa44.22■■■■■ 4.67
HMG20B-209ENST00000470356 TERF2IPQ9NYB0 399 aa44.22■■■■■ 4.67
HMG20B-209ENST00000470356 USP54Q70EL1 1684 aa44.21■■■■■ 4.67
HMG20B-209ENST00000470356 APBA3O96018 575 aa44.21■■■■■ 4.67
HMG20B-209ENST00000470356 EZH2Q15910 746 aaKnown RBP44.2■■■■■ 4.67
HMG20B-209ENST00000470356 NME9Q86XW9 330 aa44.2■■■■■ 4.67
HMG20B-209ENST00000470356 C11orf95C9JLR9 678 aaPredicted RBP44.19■■■■■ 4.66
HMG20B-209ENST00000470356 SLC24A1O60721 1099 aa44.19■■■■■ 4.66
HMG20B-209ENST00000470356 EDC4Q6P2E9 1401 aaKnown RBP44.18■■■■■ 4.66
HMG20B-209ENST00000470356 PSDA5PKW4 1024 aaPredicted RBP44.17■■■■■ 4.66
HMG20B-209ENST00000470356 ABCC6O95255 1503 aa44.17■■■■■ 4.66
HMG20B-209ENST00000470356 PARD3Q8TEW0 1356 aa44.16■■■■■ 4.66
HMG20B-209ENST00000470356 DDB1Q16531 1140 aa44.15■■■■■ 4.66
HMG20B-209ENST00000470356 CDCA7Q9BWT1 371 aaPredicted RBP44.15■■■■■ 4.66
HMG20B-209ENST00000470356 CARD10Q9BWT7 1032 aa44.15■■■■■ 4.66
HMG20B-209ENST00000470356 A0A1W2PP64 1363 aa44.15■■■■■ 4.66
HMG20B-209ENST00000470356 CSB-PGBD3P0DP91 1061 aa44.14■■■■■ 4.66
HMG20B-209ENST00000470356 LRRC37A3O60309 1634 aa44.13■■■■■ 4.66
HMG20B-209ENST00000470356 WNK3Q9BYP7 1800 aa44.13■■■■■ 4.65
HMG20B-209ENST00000470356 NINLQ9Y2I6 1382 aa44.12■■■■■ 4.65
HMG20B-209ENST00000470356 PEAK1Q9H792 1746 aa44.1■■■■■ 4.65
HMG20B-209ENST00000470356 OVOS2A0A0G2JMS6 1433 aa44.1■■■■■ 4.65
HMG20B-209ENST00000470356 OVOS2A0A0J9YW53 1432 aa44.1■■■■■ 4.65
HMG20B-209ENST00000470356 OVOS2Q6IE36 1432 aa44.1■■■■■ 4.65
HMG20B-209ENST00000470356 LRP5O75197 1615 aa44.06■■■■■ 4.64
HMG20B-209ENST00000470356 LTN1O94822 1766 aa44.05■■■■■ 4.64
HMG20B-209ENST00000470356 R3HDM1Q15032 1099 aaKnown RBP44.05■■■■■ 4.64
HMG20B-209ENST00000470356 CCDC7Q96M83 1385 aa44.04■■■■■ 4.64
HMG20B-209ENST00000470356 SBF2Q86WG5 1849 aa44.03■■■■■ 4.64
HMG20B-209ENST00000470356 RREB1Q92766 1687 aa44.01■■■■■ 4.64
HMG20B-209ENST00000470356 MARCH10Q8NA82 808 aaPredicted RBP44■■■■■ 4.63
HMG20B-209ENST00000470356 USP47Q96K76 1375 aa44■■■■■ 4.63
HMG20B-209ENST00000470356 ERBB3P21860 1342 aa43.99■■■■■ 4.63
HMG20B-209ENST00000470356 TIMELESSQ9UNS1 1208 aa43.96■■■■■ 4.63
HMG20B-209ENST00000470356 BCL9O00512 1426 aa43.96■■■■■ 4.63
HMG20B-209ENST00000470356 EXOC5O00471 708 aa43.95■■■■■ 4.63
HMG20B-209ENST00000470356 TMF1P82094 1093 aa43.95■■■■■ 4.63
HMG20B-209ENST00000470356 NUP188Q5SRE5 1749 aa43.95■■■■■ 4.63
HMG20B-209ENST00000470356 BCL11BQ9C0K0 894 aaPredicted RBP43.93■■■■■ 4.62
HMG20B-209ENST00000470356 NLRP2Q9NX02 1062 aa43.93■■■■■ 4.62
HMG20B-209ENST00000470356 ANKRD36BQ8N2N9 1353 aa43.91■■■■■ 4.62
HMG20B-209ENST00000470356 PLSCR1O15162 318 aa43.9■■■■■ 4.62
HMG20B-209ENST00000470356 ANKRD24Q8TF21 1146 aa43.9■■■■■ 4.62
HMG20B-209ENST00000470356 CLSPNQ9HAW4 1339 aa43.9■■■■■ 4.62
HMG20B-209ENST00000470356 NBPF14Q5TI25 921 aa43.89■■■■■ 4.62
HMG20B-209ENST00000470356 COG3Q96JB2 828 aa43.88■■■■■ 4.62
HMG20B-209ENST00000470356 RGPD3A6NKT7 1758 aaPredicted RBP43.87■■■■■ 4.61
HMG20B-209ENST00000470356 RGPD4Q7Z3J3 1758 aa43.87■■■■■ 4.61
HMG20B-209ENST00000470356 PTF1AQ7RTS3 328 aa43.86■■■■■ 4.61
HMG20B-209ENST00000470356 IP6K1Q92551 441 aa43.86■■■■■ 4.61
HMG20B-209ENST00000470356 TNS2Q63HR2 1409 aa43.85■■■■■ 4.61
HMG20B-209ENST00000470356 PCGF6Q9BYE7 350 aa43.85■■■■■ 4.61
HMG20B-209ENST00000470356 IL2RBP14784 551 aa43.82■■■■■ 4.61
HMG20B-209ENST00000470356 CDCA8Q53HL2 280 aa43.82■■■■■ 4.61
HMG20B-209ENST00000470356 MAP3K19Q56UN5 1328 aa43.76■■■■■ 4.6
HMG20B-209ENST00000470356 FYB1O15117 783 aa43.74■■■■■ 4.59
HMG20B-209ENST00000470356 FAM208AQ9UK61 1670 aaKnown RBP43.73■■■■■ 4.59
HMG20B-209ENST00000470356 FBLN1P23142 703 aa43.72■■■■■ 4.59
HMG20B-209ENST00000470356 HOXC9P31274 260 aa43.71■■■■■ 4.59
HMG20B-209ENST00000470356 AMPHP49418 695 aa43.71■■■■■ 4.59
HMG20B-209ENST00000470356 LTV1Q96GA3 475 aaPredicted RBP43.71■■■■■ 4.59
HMG20B-209ENST00000470356 PROM2Q8N271 834 aa43.7■■■■■ 4.59
HMG20B-209ENST00000470356 KAT6BQ8WYB5 2073 aa43.69■■■■■ 4.59
HMG20B-209ENST00000470356 GGNBP2Q9H3C7 697 aa43.69■■■■■ 4.58
HMG20B-209ENST00000470356 KCNQ2O43526 872 aa43.67■■■■■ 4.58
HMG20B-209ENST00000470356 NHSQ6T4R5 1651 aa43.65■■■■■ 4.58
HMG20B-209ENST00000470356 RTL1A6NKG5 1358 aa43.63■■■■■ 4.57
HMG20B-209ENST00000470356 TXNRD1Q16881 649 aa43.61■■■■■ 4.57
HMG20B-209ENST00000470356 ACSBG1Q96GR2 724 aa43.61■■■■■ 4.57
HMG20B-209ENST00000470356 KIF20BQ96Q89 1820 aa43.61■■■■■ 4.57
HMG20B-209ENST00000470356 RRS1Q15050 365 aaKnown RBP43.6■■■■■ 4.57
HMG20B-209ENST00000470356 ANO8Q9HCE9 1232 aaPredicted RBP43.6■■■■■ 4.57
HMG20B-209ENST00000470356 MYOM1P52179 1685 aa43.59■■■■■ 4.57
HMG20B-209ENST00000470356 CARD14Q9BXL6 1004 aa43.58■■■■■ 4.57
HMG20B-209ENST00000470356 RGPD2P0DJD1 1756 aa43.57■■■■■ 4.57
HMG20B-209ENST00000470356 SPON1Q9HCB6 807 aa43.54■■■■■ 4.56
HMG20B-209ENST00000470356 DDX54Q8TDD1 881 aaKnown RBP43.52■■■■■ 4.56
HMG20B-209ENST00000470356 BTAF1O14981 1849 aa43.51■■■■■ 4.56
HMG20B-209ENST00000470356 NSD3Q9BZ95 1437 aa43.49■■■■■ 4.55
HMG20B-209ENST00000470356 NBPF6Q5VWK0 638 aa43.48■■■■■ 4.55
HMG20B-209ENST00000470356 NBPF4Q96M43 638 aa43.48■■■■■ 4.55
HMG20B-209ENST00000470356 STK32BQ9NY57 414 aa43.48■■■■■ 4.55
HMG20B-209ENST00000470356 KIF24Q5T7B8 1368 aa43.47■■■■■ 4.55
HMG20B-209ENST00000470356 CASZ1Q86V15 1759 aa43.46■■■■■ 4.55
HMG20B-209ENST00000470356 CCER1Q8TC90 406 aaPredicted RBP43.46■■■■■ 4.55
HMG20B-209ENST00000470356 SMG6Q86US8 1419 aaKnown RBP43.46■■■■■ 4.55
HMG20B-209ENST00000470356 INSRP06213 1382 aa43.45■■■■■ 4.55
HMG20B-209ENST00000470356 SLC15A2Q16348 729 aa43.44■■■■■ 4.54
HMG20B-209ENST00000470356 HSP90AB2PQ58FF8 381 aa43.44■■■■■ 4.54
HMG20B-209ENST00000470356 ZCRB1Q8TBF4 217 aaKnown RBP43.44■■■■■ 4.54
HMG20B-209ENST00000470356 MEGF6O75095 1541 aa43.43■■■■■ 4.54
HMG20B-209ENST00000470356 FLT4P35916 1363 aa43.43■■■■■ 4.54
HMG20B-209ENST00000470356 PDGFDQ9GZP0 370 aaPredicted RBP43.41■■■■■ 4.54
HMG20B-209ENST00000470356 CGNL1Q0VF96 1302 aa43.4■■■■■ 4.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms