RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SOX12O15370 315 aa19.69■□□□□ 0.74
TOP3B-215ENST00000470338 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
TOP3B-215ENST00000470338 ABCC6O95255 1503 aa19.68■□□□□ 0.74
TOP3B-215ENST00000470338 BARGINQ6ZT62 677 aa19.67■□□□□ 0.74
TOP3B-215ENST00000470338 KRT27Q7Z3Y8 459 aa19.66■□□□□ 0.74
TOP3B-215ENST00000470338 KIF20BQ96Q89 1820 aa19.65■□□□□ 0.74
TOP3B-215ENST00000470338 FYB1O15117 783 aa19.65■□□□□ 0.74
TOP3B-215ENST00000470338 COG3Q96JB2 828 aa19.65■□□□□ 0.74
TOP3B-215ENST00000470338 CARD14Q9BXL6 1004 aa19.65■□□□□ 0.74
TOP3B-215ENST00000470338 THRAP3Q9Y2W1 955 aaKnown RBP19.65■□□□□ 0.74
TOP3B-215ENST00000470338 CRB1P82279 1406 aa19.65■□□□□ 0.74
TOP3B-215ENST00000470338 A0A0G2JS52 829 aa19.64■□□□□ 0.73
TOP3B-215ENST00000470338 MYT1Q01538 1121 aa19.64■□□□□ 0.73
TOP3B-215ENST00000470338 TCP11L2Q8N4U5 519 aa19.64■□□□□ 0.73
TOP3B-215ENST00000470338 USP35Q9P2H5 1018 aa19.64■□□□□ 0.73
TOP3B-215ENST00000470338 WDR17Q8IZU2 1322 aa19.63■□□□□ 0.73
TOP3B-215ENST00000470338 CCDC125Q86Z20 511 aa19.62■□□□□ 0.73
TOP3B-215ENST00000470338 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
TOP3B-215ENST00000470338 GGNBP2Q9H3C7 697 aa19.61■□□□□ 0.73
TOP3B-215ENST00000470338 PARP4Q9UKK3 1724 aaKnown RBP19.6■□□□□ 0.73
TOP3B-215ENST00000470338 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
TOP3B-215ENST00000470338 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
TOP3B-215ENST00000470338 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
TOP3B-215ENST00000470338 WNK3Q9BYP7 1800 aa19.59■□□□□ 0.73
TOP3B-215ENST00000470338 CARD10Q9BWT7 1032 aa19.58■□□□□ 0.72
TOP3B-215ENST00000470338 FBLN1P23142 703 aa19.57■□□□□ 0.72
TOP3B-215ENST00000470338 IP6K1Q92551 441 aa19.57■□□□□ 0.72
TOP3B-215ENST00000470338 ERBB3P21860 1342 aa19.56■□□□□ 0.72
TOP3B-215ENST00000470338 MAP3K19Q56UN5 1328 aa19.56■□□□□ 0.72
TOP3B-215ENST00000470338 CSB-PGBD3P0DP91 1061 aa19.56■□□□□ 0.72
TOP3B-215ENST00000470338 BLMP54132 1417 aaPredicted RBP19.56■□□□□ 0.72
TOP3B-215ENST00000470338 FAM182BQ5T319 152 aa19.54■□□□□ 0.72
TOP3B-215ENST00000470338 ANKRD24Q8TF21 1146 aa19.54■□□□□ 0.72
TOP3B-215ENST00000470338 PANK3Q9H999 370 aa19.54■□□□□ 0.72
TOP3B-215ENST00000470338 CGNL1Q0VF96 1302 aa19.53■□□□□ 0.72
TOP3B-215ENST00000470338 HOXC9P31274 260 aa19.53■□□□□ 0.72
TOP3B-215ENST00000470338 PDE3BQ13370 1112 aa19.53■□□□□ 0.72
TOP3B-215ENST00000470338 CDCA7Q9BWT1 371 aaPredicted RBP19.53■□□□□ 0.72
TOP3B-215ENST00000470338 CCDC7Q96M83 1385 aa19.53■□□□□ 0.72
TOP3B-215ENST00000470338 ANKRD26Q9UPS8 1709 aa19.53■□□□□ 0.72
TOP3B-215ENST00000470338 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.72
TOP3B-215ENST00000470338 LRRC37A3O60309 1634 aa19.52■□□□□ 0.72
TOP3B-215ENST00000470338 MAP2P11137 1827 aaKnown RBP19.52■□□□□ 0.72
TOP3B-215ENST00000470338 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
TOP3B-215ENST00000470338 DISP2A7MBM2 1401 aa19.51■□□□□ 0.71
TOP3B-215ENST00000470338 RGPD1P0DJD0 1748 aa19.51■□□□□ 0.71
TOP3B-215ENST00000470338 AMPHP49418 695 aa19.51■□□□□ 0.71
TOP3B-215ENST00000470338 RRS1Q15050 365 aaKnown RBP19.51■□□□□ 0.71
TOP3B-215ENST00000470338 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
TOP3B-215ENST00000470338 RTL1A6NKG5 1358 aa19.51■□□□□ 0.71
TOP3B-215ENST00000470338 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
TOP3B-215ENST00000470338 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
TOP3B-215ENST00000470338 PEAK1Q9H792 1746 aa19.49■□□□□ 0.71
TOP3B-215ENST00000470338 DDB1Q16531 1140 aa19.49■□□□□ 0.71
TOP3B-215ENST00000470338 KIF24Q5T7B8 1368 aa19.48■□□□□ 0.71
TOP3B-215ENST00000470338 SF3B2Q13435 895 aaKnown RBP19.48■□□□□ 0.71
TOP3B-215ENST00000470338 TNS1Q9HBL0 1735 aaKnown RBP19.48■□□□□ 0.71
TOP3B-215ENST00000470338 SBF2Q86WG5 1849 aa19.47■□□□□ 0.71
TOP3B-215ENST00000470338 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
TOP3B-215ENST00000470338 DEFB132Q7Z7B7 95 aa19.45■□□□□ 0.7
TOP3B-215ENST00000470338 NSD2O96028 1365 aa19.44■□□□□ 0.7
TOP3B-215ENST00000470338 INSRP06213 1382 aa19.44■□□□□ 0.7
TOP3B-215ENST00000470338 FLT4P35916 1363 aa19.44■□□□□ 0.7
TOP3B-215ENST00000470338 EXOC5O00471 708 aa19.44■□□□□ 0.7
TOP3B-215ENST00000470338 IL2RBP14784 551 aa19.44■□□□□ 0.7
TOP3B-215ENST00000470338 OVOS2A0A0G2JMS6 1433 aa19.43■□□□□ 0.7
TOP3B-215ENST00000470338 TRIM37O94972 964 aa19.43■□□□□ 0.7
TOP3B-215ENST00000470338 HSP90AB2PQ58FF8 381 aa19.43■□□□□ 0.7
TOP3B-215ENST00000470338 MARCH10Q8NA82 808 aaPredicted RBP19.43■□□□□ 0.7
TOP3B-215ENST00000470338 EMILIN1Q9Y6C2 1016 aa19.43■□□□□ 0.7
TOP3B-215ENST00000470338 BAG6P46379 1132 aa19.42■□□□□ 0.7
TOP3B-215ENST00000470338 KNSTRNQ9Y448 316 aa19.42■□□□□ 0.7
TOP3B-215ENST00000470338 WASHC2AQ641Q2 1341 aa19.42■□□□□ 0.7
TOP3B-215ENST00000470338 BCL9O00512 1426 aa19.42■□□□□ 0.7
TOP3B-215ENST00000470338 TNS2Q63HR2 1409 aa19.42■□□□□ 0.7
TOP3B-215ENST00000470338 POLKQ9UBT6 870 aa19.41■□□□□ 0.7
TOP3B-215ENST00000470338 PER1O15534 1290 aaPredicted RBP19.4■□□□□ 0.7
TOP3B-215ENST00000470338 NBPF6Q5VWK0 638 aa19.4■□□□□ 0.7
TOP3B-215ENST00000470338 NBPF4Q96M43 638 aa19.4■□□□□ 0.7
TOP3B-215ENST00000470338 AMER1Q5JTC6 1135 aaPredicted RBP19.39■□□□□ 0.69
TOP3B-215ENST00000470338 SMG6Q86US8 1419 aaKnown RBP19.39■□□□□ 0.69
TOP3B-215ENST00000470338 EN1Q05925 392 aaPredicted RBP19.38■□□□□ 0.69
TOP3B-215ENST00000470338 PPM1GO15355 546 aaPredicted RBP19.37■□□□□ 0.69
TOP3B-215ENST00000470338 TNNT2P45379 298 aaPredicted RBP19.37■□□□□ 0.69
TOP3B-215ENST00000470338 APBA3O96018 575 aa19.36■□□□□ 0.69
TOP3B-215ENST00000470338 MORC1Q86VD1 984 aa19.36■□□□□ 0.69
TOP3B-215ENST00000470338 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
TOP3B-215ENST00000470338 CAMKK2Q96RR4 588 aa19.35■□□□□ 0.69
TOP3B-215ENST00000470338 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
TOP3B-215ENST00000470338 BCL11BQ9C0K0 894 aaPredicted RBP19.34■□□□□ 0.69
TOP3B-215ENST00000470338 EZH2Q15910 746 aaKnown RBP19.33■□□□□ 0.68
TOP3B-215ENST00000470338 USHBP1Q8N6Y0 703 aa19.33■□□□□ 0.68
TOP3B-215ENST00000470338 MEGF6O75095 1541 aa19.33■□□□□ 0.68
TOP3B-215ENST00000470338 NCAPD2Q15021 1401 aa19.33■□□□□ 0.68
TOP3B-215ENST00000470338 PARD3Q8TEW0 1356 aa19.32■□□□□ 0.68
TOP3B-215ENST00000470338 RGPD3A6NKT7 1758 aaPredicted RBP19.32■□□□□ 0.68
TOP3B-215ENST00000470338 RGPD4Q7Z3J3 1758 aa19.32■□□□□ 0.68
TOP3B-215ENST00000470338 RREB1Q92766 1687 aa19.31■□□□□ 0.68
TOP3B-215ENST00000470338 PTF1AQ7RTS3 328 aa19.31■□□□□ 0.68
TOP3B-215ENST00000470338 ZCRB1Q8TBF4 217 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms