RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 ST18O60284 1047 aa11.65□□□□□ -0.54
NHLRC3-203ENST00000470258 KIF20AO95235 890 aa11.65□□□□□ -0.54
NHLRC3-203ENST00000470258 U2AF2P26368 475 aaKnown RBP eCLIP11.65□□□□□ -0.544e-7■■■■□ 24.7
NHLRC3-203ENST00000470258 LETM1O95202 739 aaPredicted RBP11.65□□□□□ -0.54
NHLRC3-203ENST00000470258 PRIMPOLQ96LW4 560 aa11.65□□□□□ -0.54
NHLRC3-203ENST00000470258 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
NHLRC3-203ENST00000470258 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 CCDC27Q2M243 656 aa11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 FANCAO15360 1455 aa11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 ELL2O00472 640 aaPredicted RBP11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 ZDHHC9Q9Y397 364 aa11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 SAMD9LQ8IVG5 1584 aa11.64□□□□□ -0.55
NHLRC3-203ENST00000470258 ZBTB22O15209 634 aa11.63□□□□□ -0.55
NHLRC3-203ENST00000470258 CYP2E1P05181 493 aaPredicted RBP11.63□□□□□ -0.55
NHLRC3-203ENST00000470258 ABCC1P33527 1531 aa11.63□□□□□ -0.55
NHLRC3-203ENST00000470258 MBD3O95983 291 aa11.63□□□□□ -0.55
NHLRC3-203ENST00000470258 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
NHLRC3-203ENST00000470258 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
NHLRC3-203ENST00000470258 CHAF1AQ13111 956 aaPredicted RBP11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 PIBF1Q8WXW3 757 aa11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 GCC1Q96CN9 775 aa11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 CT47B1P0C2W7 299 aaPredicted RBP11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 GSPT1P15170 499 aaKnown RBP11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 NAP1L2Q9ULW6 460 aaPredicted RBP11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
NHLRC3-203ENST00000470258 TMPOP42166 694 aaKnown RBP11.61□□□□□ -0.55
NHLRC3-203ENST00000470258 SYAP1Q96A49 352 aaPredicted RBP11.61□□□□□ -0.55
NHLRC3-203ENST00000470258 MYOM1P52179 1685 aa11.61□□□□□ -0.55
NHLRC3-203ENST00000470258 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
NHLRC3-203ENST00000470258 ADCY5O95622 1261 aa11.61□□□□□ -0.55
NHLRC3-203ENST00000470258 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
NHLRC3-203ENST00000470258 KDM5AP29375 1690 aaKnown RBP11.6□□□□□ -0.55
NHLRC3-203ENST00000470258 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
NHLRC3-203ENST00000470258 PPIP5K1Q6PFW1 1433 aa11.6□□□□□ -0.55
NHLRC3-203ENST00000470258 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
NHLRC3-203ENST00000470258 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
NHLRC3-203ENST00000470258 NEK4P51957 841 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 ERVK-7P63135 1459 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 INTS3Q68E01 1043 aaKnown RBP11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 CASC1Q6TDU7 716 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 SPC24Q8NBT2 197 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 SENP3Q9H4L4 574 aaPredicted RBP11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 KANK1Q14678 1352 aa11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 GADD45BO75293 160 aaPredicted RBP11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 HCLS1P14317 486 aaPredicted RBP11.59□□□□□ -0.55
NHLRC3-203ENST00000470258 IQGAP1P46940 1657 aa11.58□□□□□ -0.56
NHLRC3-203ENST00000470258 OTUD7AQ8TE49 926 aaPredicted RBP11.58□□□□□ -0.56
NHLRC3-203ENST00000470258 ADGRL1O94910 1474 aa11.58□□□□□ -0.56
NHLRC3-203ENST00000470258 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
NHLRC3-203ENST00000470258 PHF14O94880 888 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 PLEKHM2Q8IWE5 1019 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 SIRT2Q8IXJ6 389 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 TMEM51Q9NW97 253 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 MADDQ8WXG6 1647 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 ADGRF5Q8IZF2 1346 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 ATAD2Q6PL18 1390 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 POGZQ7Z3K3 1410 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 SMARCA5O60264 1052 aaPredicted RBP11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 DIAPH3Q9NSV4 1193 aa11.57□□□□□ -0.56
NHLRC3-203ENST00000470258 SYCP2Q9BX26 1530 aa11.56□□□□□ -0.56
NHLRC3-203ENST00000470258 ABCC11Q96J66 1382 aa11.56□□□□□ -0.56
NHLRC3-203ENST00000470258 GTF2F1P35269 517 aaKnown RBP eCLIP11.56□□□□□ -0.56
NHLRC3-203ENST00000470258 FKBP5Q13451 457 aaPredicted RBP11.56□□□□□ -0.56
NHLRC3-203ENST00000470258 ARHGEF40Q8TER5 1519 aa11.56□□□□□ -0.56
NHLRC3-203ENST00000470258 TTC22Q5TAA0 569 aa11.56□□□□□ -0.56
NHLRC3-203ENST00000470258 TMX3Q96JJ7 454 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 THUMPD2Q9BTF0 503 aaKnown RBP11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 CEP152O94986 1710 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 SAFB2Q14151 953 aaKnown RBP eCLIP11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 ZNF518AQ6AHZ1 1483 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 ARHGEF5Q12774 1597 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 HECW2Q9P2P5 1572 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 NOS1P29475 1434 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 SDSP20132 328 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 PYCARDQ9ULZ3 195 aa11.55□□□□□ -0.56
NHLRC3-203ENST00000470258 INO80Q9ULG1 1556 aaPredicted RBP11.54□□□□□ -0.56
NHLRC3-203ENST00000470258 KCNJ4P48050 445 aa11.54□□□□□ -0.56
NHLRC3-203ENST00000470258 GGNBP2Q9H3C7 697 aa11.54□□□□□ -0.56
NHLRC3-203ENST00000470258 REC8O95072 547 aa11.54□□□□□ -0.56
NHLRC3-203ENST00000470258 USP48Q86UV5 1035 aa11.54□□□□□ -0.56
NHLRC3-203ENST00000470258 ARHGAP31Q2M1Z3 1444 aa11.54□□□□□ -0.56
NHLRC3-203ENST00000470258 TMEM132EQ6IEE7 984 aa11.54□□□□□ -0.56
NHLRC3-203ENST00000470258 KIDINS220Q9ULH0 1771 aa11.53□□□□□ -0.56
NHLRC3-203ENST00000470258 FAM184AQ8NB25 1140 aa11.53□□□□□ -0.56
NHLRC3-203ENST00000470258 ERICH4A6NGS2 130 aa11.53□□□□□ -0.56
NHLRC3-203ENST00000470258 PTPRTO14522 1441 aa11.53□□□□□ -0.56
NHLRC3-203ENST00000470258 SIGLEC1Q9BZZ2 1709 aa11.52□□□□□ -0.56
NHLRC3-203ENST00000470258 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.56
NHLRC3-203ENST00000470258 EFCAB2Q5VUJ9 269 aa11.52□□□□□ -0.56
NHLRC3-203ENST00000470258 TAF3Q5VWG9 929 aa11.52□□□□□ -0.56
NHLRC3-203ENST00000470258 TSPYL6Q8N831 410 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms