RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
LINC00173-201ENST00000470091 WDR17Q8IZU2 1322 aa19.01■□□□□ 0.63
LINC00173-201ENST00000470091 TTC21AQ8NDW8 1320 aa19.01■□□□□ 0.63
LINC00173-201ENST00000470091 SLIT3O75094 1523 aa19.01■□□□□ 0.63
LINC00173-201ENST00000470091 PTF1AQ7RTS3 328 aa19■□□□□ 0.63
LINC00173-201ENST00000470091 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
LINC00173-201ENST00000470091 PIK3C2AO00443 1686 aa19■□□□□ 0.63
LINC00173-201ENST00000470091 MARCH10Q8NA82 808 aaPredicted RBP18.99■□□□□ 0.63
LINC00173-201ENST00000470091 SLC12A5Q9H2X9 1139 aa18.99■□□□□ 0.63
LINC00173-201ENST00000470091 LRP5O75197 1615 aa18.99■□□□□ 0.63
LINC00173-201ENST00000470091 C11orf95C9JLR9 678 aaPredicted RBP18.98■□□□□ 0.63
LINC00173-201ENST00000470091 NME9Q86XW9 330 aa18.98■□□□□ 0.63
LINC00173-201ENST00000470091 CARD10Q9BWT7 1032 aa18.98■□□□□ 0.63
LINC00173-201ENST00000470091 CPSF1Q10570 1443 aaKnown RBP18.98■□□□□ 0.63
LINC00173-201ENST00000470091 EXOC5O00471 708 aa18.96■□□□□ 0.63
LINC00173-201ENST00000470091 HSPA5P11021 654 aaKnown RBP18.96■□□□□ 0.63
LINC00173-201ENST00000470091 HDGFL2Q7Z4V5 671 aaPredicted RBP18.96■□□□□ 0.63
LINC00173-201ENST00000470091 CDCA7Q9BWT1 371 aaPredicted RBP18.96■□□□□ 0.63
LINC00173-201ENST00000470091 OVOS2A0A0G2JMS6 1433 aa18.96■□□□□ 0.63
LINC00173-201ENST00000470091 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
LINC00173-201ENST00000470091 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
LINC00173-201ENST00000470091 COL18A1P39060 1754 aa18.96■□□□□ 0.63
LINC00173-201ENST00000470091 BCL11BQ9C0K0 894 aaPredicted RBP18.95■□□□□ 0.62
LINC00173-201ENST00000470091 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
LINC00173-201ENST00000470091 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
LINC00173-201ENST00000470091 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
LINC00173-201ENST00000470091 USP47Q96K76 1375 aa18.93■□□□□ 0.62
LINC00173-201ENST00000470091 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
LINC00173-201ENST00000470091 RGPD5Q99666 1765 aa18.92■□□□□ 0.62
LINC00173-201ENST00000470091 PLSCR1O15162 318 aa18.92■□□□□ 0.62
LINC00173-201ENST00000470091 TERF2IPQ9NYB0 399 aa18.91■□□□□ 0.62
LINC00173-201ENST00000470091 SBNO2Q9Y2G9 1366 aa18.91■□□□□ 0.62
LINC00173-201ENST00000470091 PROM2Q8N271 834 aa18.9■□□□□ 0.62
LINC00173-201ENST00000470091 PPP1R1BQ9UD71 204 aaPredicted RBP18.9■□□□□ 0.62
LINC00173-201ENST00000470091 NFAT5O94916 1531 aa18.9■□□□□ 0.62
LINC00173-201ENST00000470091 SPON1Q9HCB6 807 aa18.89■□□□□ 0.61
LINC00173-201ENST00000470091 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
LINC00173-201ENST00000470091 LRRC37A3O60309 1634 aa18.89■□□□□ 0.61
LINC00173-201ENST00000470091 ST20-MTHFSA0A0A6YYL1 179 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 KCNQ2O43526 872 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 ACSBG1Q96GR2 724 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
LINC00173-201ENST00000470091 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 CD163L1Q9NR16 1453 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 RREB1Q92766 1687 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 NUP188Q5SRE5 1749 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 PEAK1Q9H792 1746 aa18.88■□□□□ 0.61
LINC00173-201ENST00000470091 LTV1Q96GA3 475 aaPredicted RBP18.87■□□□□ 0.61
LINC00173-201ENST00000470091 PDGFDQ9GZP0 370 aaPredicted RBP18.86■□□□□ 0.61
LINC00173-201ENST00000470091 A0A1W2PP64 1363 aa18.85■□□□□ 0.61
LINC00173-201ENST00000470091 ERBB3P21860 1342 aa18.85■□□□□ 0.61
LINC00173-201ENST00000470091 TXNRD1Q16881 649 aa18.85■□□□□ 0.61
LINC00173-201ENST00000470091 SBF2Q86WG5 1849 aa18.85■□□□□ 0.61
LINC00173-201ENST00000470091 EDC4Q6P2E9 1401 aaKnown RBP18.84■□□□□ 0.61
LINC00173-201ENST00000470091 MON2Q7Z3U7 1717 aa18.84■□□□□ 0.61
LINC00173-201ENST00000470091 IL2RBP14784 551 aa18.84■□□□□ 0.61
LINC00173-201ENST00000470091 FBLN1P23142 703 aa18.84■□□□□ 0.61
LINC00173-201ENST00000470091 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
LINC00173-201ENST00000470091 TESK2Q96S53 571 aa18.84■□□□□ 0.61
LINC00173-201ENST00000470091 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
LINC00173-201ENST00000470091 PUS7Q96PZ0 661 aaKnown RBP18.83■□□□□ 0.6
LINC00173-201ENST00000470091 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
LINC00173-201ENST00000470091 BCL9O00512 1426 aa18.82■□□□□ 0.6
LINC00173-201ENST00000470091 IP6K1Q92551 441 aa18.81■□□□□ 0.6
LINC00173-201ENST00000470091 COG3Q96JB2 828 aa18.81■□□□□ 0.6
LINC00173-201ENST00000470091 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
LINC00173-201ENST00000470091 KAT6BQ8WYB5 2073 aa18.8■□□□□ 0.6
LINC00173-201ENST00000470091 DDX54Q8TDD1 881 aaKnown RBP18.8■□□□□ 0.6
LINC00173-201ENST00000470091 WNK3Q9BYP7 1800 aa18.79■□□□□ 0.6
LINC00173-201ENST00000470091 TNS2Q63HR2 1409 aa18.79■□□□□ 0.6
LINC00173-201ENST00000470091 AMPHP49418 695 aa18.78■□□□□ 0.6
LINC00173-201ENST00000470091 SLC15A2Q16348 729 aa18.78■□□□□ 0.6
LINC00173-201ENST00000470091 ABCC6O95255 1503 aa18.77■□□□□ 0.6
LINC00173-201ENST00000470091 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
LINC00173-201ENST00000470091 LTN1O94822 1766 aa18.76■□□□□ 0.59
LINC00173-201ENST00000470091 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
LINC00173-201ENST00000470091 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
LINC00173-201ENST00000470091 MAP3K19Q56UN5 1328 aa18.75■□□□□ 0.59
LINC00173-201ENST00000470091 YY1P25490 414 aa18.74■□□□□ 0.59
LINC00173-201ENST00000470091 HOXC9P31274 260 aa18.74■□□□□ 0.59
LINC00173-201ENST00000470091 TMF1P82094 1093 aa18.74■□□□□ 0.59
LINC00173-201ENST00000470091 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
LINC00173-201ENST00000470091 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
LINC00173-201ENST00000470091 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
LINC00173-201ENST00000470091 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
LINC00173-201ENST00000470091 RGPD3A6NKT7 1758 aaPredicted RBP18.73■□□□□ 0.59
LINC00173-201ENST00000470091 RGPD4Q7Z3J3 1758 aa18.73■□□□□ 0.59
LINC00173-201ENST00000470091 KIF7Q2M1P5 1343 aa18.73■□□□□ 0.59
LINC00173-201ENST00000470091 NINLQ9Y2I6 1382 aa18.72■□□□□ 0.59
LINC00173-201ENST00000470091 PTGER2P43116 358 aa18.72■□□□□ 0.59
LINC00173-201ENST00000470091 USP54Q70EL1 1684 aa18.72■□□□□ 0.59
LINC00173-201ENST00000470091 FYB1O15117 783 aa18.71■□□□□ 0.59
LINC00173-201ENST00000470091 LRRC4BQ9NT99 713 aa18.71■□□□□ 0.59
LINC00173-201ENST00000470091 PRIM1P49642 420 aaKnown RBP18.7■□□□□ 0.58
LINC00173-201ENST00000470091 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
LINC00173-201ENST00000470091 ANKRD36BQ8N2N9 1353 aa18.69■□□□□ 0.58
LINC00173-201ENST00000470091 KCNQ4P56696 695 aa18.69■□□□□ 0.58
LINC00173-201ENST00000470091 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
LINC00173-201ENST00000470091 MTFR1LQ9H019 292 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms