RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 PRDM11Q9NQV5 511 aa27.95■■■□□ 2.06
BRAF-202ENST00000469930 COL14A1Q05707 1796 aaKnown RBP27.94■■■□□ 2.06
BRAF-202ENST00000469930 PLEKHG5O94827 1062 aa27.94■■■□□ 2.06
BRAF-202ENST00000469930 FAM83GA6ND36 823 aa27.93■■■□□ 2.06
BRAF-202ENST00000469930 PPM1GO15355 546 aaPredicted RBP27.92■■■□□ 2.06
BRAF-202ENST00000469930 HSP90AB2PQ58FF8 381 aa27.92■■■□□ 2.06
BRAF-202ENST00000469930 CCDC184Q52MB2 194 aa27.91■■■□□ 2.06
BRAF-202ENST00000469930 SOCS7O14512 581 aa27.9■■■□□ 2.06
BRAF-202ENST00000469930 DIAPH1O60610 1272 aaKnown RBP27.9■■■□□ 2.06
BRAF-202ENST00000469930 MRS2Q9HD23 443 aa27.9■■■□□ 2.06
BRAF-202ENST00000469930 AXIN2Q9Y2T1 843 aa27.9■■■□□ 2.06
BRAF-202ENST00000469930 LRP6O75581 1613 aa27.89■■■□□ 2.06
BRAF-202ENST00000469930 NUTM2BA6NNL0 878 aaPredicted RBP27.89■■■□□ 2.06
BRAF-202ENST00000469930 NUTM2EB1AL46 878 aaPredicted RBP27.89■■■□□ 2.06
BRAF-202ENST00000469930 IL13P35225 146 aa27.89■■■□□ 2.06
BRAF-202ENST00000469930 NUTM2AQ8IVF1 878 aaPredicted RBP27.89■■■□□ 2.06
BRAF-202ENST00000469930 CAMTA1Q9Y6Y1 1673 aa27.87■■■□□ 2.05
BRAF-202ENST00000469930 CHRNA2Q15822 529 aa27.87■■■□□ 2.05
BRAF-202ENST00000469930 PNISRQ8TF01 805 aaKnown RBP27.87■■■□□ 2.05
BRAF-202ENST00000469930 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
BRAF-202ENST00000469930 ADAMTS2O95450 1211 aa27.86■■■□□ 2.05
BRAF-202ENST00000469930 EIF4A2Q14240 407 aaKnown RBP27.86■■■□□ 2.05
BRAF-202ENST00000469930 SLIT2O94813 1529 aa27.86■■■□□ 2.05
BRAF-202ENST00000469930 ERBB3P21860 1342 aa27.85■■■□□ 2.05
BRAF-202ENST00000469930 NWD2Q9ULI1 1742 aa27.84■■■□□ 2.05
BRAF-202ENST00000469930 ZBTB7CA1YPR0 619 aa27.84■■■□□ 2.05
BRAF-202ENST00000469930 FNBP4Q8N3X1 1017 aaPredicted RBP27.84■■■□□ 2.05
BRAF-202ENST00000469930 COL5A2P05997 1499 aaPredicted RBP27.83■■■□□ 2.05
BRAF-202ENST00000469930 ANKRD24Q8TF21 1146 aa27.83■■■□□ 2.05
BRAF-202ENST00000469930 RGPD5Q99666 1765 aa27.83■■■□□ 2.05
BRAF-202ENST00000469930 FAM208AQ9UK61 1670 aaKnown RBP27.82■■■□□ 2.04
BRAF-202ENST00000469930 PLCH1Q4KWH8 1693 aa27.81■■■□□ 2.04
BRAF-202ENST00000469930 RGPD1P0DJD0 1748 aa27.81■■■□□ 2.04
BRAF-202ENST00000469930 BTG4Q9NY30 223 aa27.8■■■□□ 2.04
BRAF-202ENST00000469930 WDR17Q8IZU2 1322 aa27.8■■■□□ 2.04
BRAF-202ENST00000469930 NCAPD2Q15021 1401 aa27.8■■■□□ 2.04
BRAF-202ENST00000469930 IGSF1Q8N6C5 1336 aa27.79■■■□□ 2.04
BRAF-202ENST00000469930 NRAPQ86VF7 1730 aa27.78■■■□□ 2.04
BRAF-202ENST00000469930 NGLY1Q96IV0 654 aa27.77■■■□□ 2.04
BRAF-202ENST00000469930 EYA1Q99502 592 aa27.77■■■□□ 2.04
BRAF-202ENST00000469930 WDR43Q15061 677 aaKnown RBP eCLIP27.76■■■□□ 2.03
BRAF-202ENST00000469930 KDRP35968 1356 aa27.75■■■□□ 2.03
BRAF-202ENST00000469930 BCL9LQ86UU0 1499 aa27.75■■■□□ 2.03
BRAF-202ENST00000469930 EVA1CP58658 441 aa27.74■■■□□ 2.03
BRAF-202ENST00000469930 MEX3CQ5U5Q3 659 aaKnown RBP27.74■■■□□ 2.03
BRAF-202ENST00000469930 UNC5CLQ8IV45 518 aa27.74■■■□□ 2.03
BRAF-202ENST00000469930 LTV1Q96GA3 475 aaPredicted RBP27.74■■■□□ 2.03
BRAF-202ENST00000469930 C8orf37Q96NL8 207 aa27.74■■■□□ 2.03
BRAF-202ENST00000469930 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.74■■■□□ 2.03
BRAF-202ENST00000469930 FCHSD2O94868 740 aa27.73■■■□□ 2.03
BRAF-202ENST00000469930 NBPF6Q5VWK0 638 aa27.73■■■□□ 2.03
BRAF-202ENST00000469930 NBPF4Q96M43 638 aa27.73■■■□□ 2.03
BRAF-202ENST00000469930 CARD10Q9BWT7 1032 aa27.73■■■□□ 2.03
BRAF-202ENST00000469930 PLEKHG2Q9H7P9 1386 aa27.73■■■□□ 2.03
BRAF-202ENST00000469930 U2SURPO15042 1029 aaKnown RBP27.72■■■□□ 2.03
BRAF-202ENST00000469930 ADAMTS8Q9UP79 889 aa27.72■■■□□ 2.03
BRAF-202ENST00000469930 CRB1P82279 1406 aa27.72■■■□□ 2.03
BRAF-202ENST00000469930 U2AF1L5P0DN76 240 aaPredicted RBP27.71■■■□□ 2.03
BRAF-202ENST00000469930 U2AF1Q01081 240 aaKnown RBP eCLIP27.71■■■□□ 2.031e-8■■■□□ 14.9
BRAF-202ENST00000469930 PNNQ9H307 717 aaKnown RBP27.71■■■□□ 2.03
BRAF-202ENST00000469930 CSB-PGBD3P0DP91 1061 aa27.7■■■□□ 2.02
BRAF-202ENST00000469930 LARP1Q6PKG0 1096 aaKnown RBP27.69■■■□□ 2.02
BRAF-202ENST00000469930 VPS72Q15906 364 aa27.68■■■□□ 2.02
BRAF-202ENST00000469930 RSPH6AQ9H0K4 717 aa27.68■■■□□ 2.02
BRAF-202ENST00000469930 USP21Q9UK80 565 aa27.68■■■□□ 2.02
BRAF-202ENST00000469930 RGPD2P0DJD1 1756 aa27.68■■■□□ 2.02
BRAF-202ENST00000469930 SULT6B1Q6IMI4 303 aa27.67■■■□□ 2.02
BRAF-202ENST00000469930 TOM1L2Q6ZVM7 507 aa27.67■■■□□ 2.02
BRAF-202ENST00000469930 STRN4Q9NRL3 753 aa27.67■■■□□ 2.02
BRAF-202ENST00000469930 NLRP2Q9NX02 1062 aa27.67■■■□□ 2.02
BRAF-202ENST00000469930 AFF2P51816 1311 aa27.67■■■□□ 2.02
BRAF-202ENST00000469930 THRAP3Q9Y2W1 955 aaKnown RBP27.66■■■□□ 2.02
BRAF-202ENST00000469930 FAM9BQ8IZU0 186 aa27.65■■■□□ 2.02
BRAF-202ENST00000469930 PLEKHF1Q96S99 279 aa27.64■■■□□ 2.02
BRAF-202ENST00000469930 SPATA31A1Q5TZJ5 1347 aa27.64■■■□□ 2.01
BRAF-202ENST00000469930 SPATA31A5Q5VU36 1347 aa27.64■■■□□ 2.01
BRAF-202ENST00000469930 SPATA31A7Q8IWB4 1347 aa27.64■■■□□ 2.01
BRAF-202ENST00000469930 AEBP1Q8IUX7 1158 aa27.62■■■□□ 2.01
BRAF-202ENST00000469930 ATRNO75882 1429 aa27.61■■■□□ 2.01
BRAF-202ENST00000469930 HMOX1P09601 288 aa27.61■■■□□ 2.01
BRAF-202ENST00000469930 RUNDC1Q96C34 613 aa27.61■■■□□ 2.01
BRAF-202ENST00000469930 ZNF772Q68DY9 489 aaPredicted RBP27.6■■■□□ 2.01
BRAF-202ENST00000469930 TCP11L2Q8N4U5 519 aa27.6■■■□□ 2.01
BRAF-202ENST00000469930 TRPC5Q9UL62 973 aaPredicted RBP27.6■■■□□ 2.01
BRAF-202ENST00000469930 PRKAR2BP31323 418 aa27.59■■■□□ 2.01
BRAF-202ENST00000469930 NCBP3Q53F19 620 aaKnown RBP27.59■■■□□ 2.01
BRAF-202ENST00000469930 BARGINQ6ZT62 677 aa27.59■■■□□ 2.01
BRAF-202ENST00000469930 CDCA7Q9BWT1 371 aaPredicted RBP27.59■■■□□ 2.01
BRAF-202ENST00000469930 USHBP1Q8N6Y0 703 aa27.58■■■□□ 2.01
BRAF-202ENST00000469930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.58■■■□□ 2.018e-7■□□□□ 11.2
BRAF-202ENST00000469930 DISP2A7MBM2 1401 aa27.57■■■□□ 2
BRAF-202ENST00000469930 RAPGEF4Q8WZA2 1011 aa27.56■■■□□ 2
BRAF-202ENST00000469930 NEFMP07197 916 aa27.55■■■□□ 2
BRAF-202ENST00000469930 IL2RBP14784 551 aa27.55■■■□□ 2
BRAF-202ENST00000469930 TATP17735 454 aaPredicted RBP27.54■■■□□ 2
BRAF-202ENST00000469930 AMOTQ4VCS5 1084 aa27.54■■■□□ 2
BRAF-202ENST00000469930 NGEFQ8N5V2 710 aa27.54■■■□□ 2
BRAF-202ENST00000469930 GJD4Q96KN9 370 aaPredicted RBP27.54■■■□□ 2
BRAF-202ENST00000469930 OVOS2A0A0G2JMS6 1433 aa27.53■■■□□ 2
BRAF-202ENST00000469930 PARP4Q9UKK3 1724 aaKnown RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms