RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 MYOM2P54296 1465 aa7.38□□□□□ -1.23
ITGA6-208ENST00000469534 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
ITGA6-208ENST00000469534 E2F4Q16254 413 aa7.38□□□□□ -1.23
ITGA6-208ENST00000469534 DDX12PQ92771 950 aa7.38□□□□□ -1.23
ITGA6-208ENST00000469534 SETD1BQ9UPS6 1966 aaKnown RBP7.38□□□□□ -1.23
ITGA6-208ENST00000469534 NEURL4Q96JN8 1562 aa7.37□□□□□ -1.23
ITGA6-208ENST00000469534 NLRP1Q9C000 1473 aa7.37□□□□□ -1.23
ITGA6-208ENST00000469534 USP47Q96K76 1375 aa7.37□□□□□ -1.23
ITGA6-208ENST00000469534 A0A0G2JS52 829 aa7.37□□□□□ -1.23
ITGA6-208ENST00000469534 STK26Q9P289 416 aa7.37□□□□□ -1.23
ITGA6-208ENST00000469534 ZNF142P52746 1687 aaPredicted RBP7.37□□□□□ -1.23
ITGA6-208ENST00000469534 KIAA1210Q9ULL0 1709 aa7.36□□□□□ -1.23
ITGA6-208ENST00000469534 LTKP29376 864 aa7.36□□□□□ -1.23
ITGA6-208ENST00000469534 HSPA2P54652 639 aa7.36□□□□□ -1.23
ITGA6-208ENST00000469534 EIF4G2P78344 907 aaKnown RBP eCLIP7.36□□□□□ -1.23
ITGA6-208ENST00000469534 TXNDC2Q86VQ3 553 aa7.36□□□□□ -1.23
ITGA6-208ENST00000469534 NRXN3Q9Y4C0 1643 aa7.36□□□□□ -1.23
ITGA6-208ENST00000469534 ASXL1Q8IXJ9 1541 aa7.36□□□□□ -1.23
ITGA6-208ENST00000469534 PIK3C2GO75747 1445 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 ZFYVE9O95405 1425 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 SETD1AO15047 1707 aaKnown RBP7.35□□□□□ -1.23
ITGA6-208ENST00000469534 TMEM2Q9UHN6 1383 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 ALKQ9UM73 1620 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 RPGRIP1LQ68CZ1 1315 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 EN1Q05925 392 aaPredicted RBP7.35□□□□□ -1.23
ITGA6-208ENST00000469534 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
ITGA6-208ENST00000469534 LAPTM4BQ86VI4 370 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 TRAK1Q9UPV9 953 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 NRXN1Q9ULB1 1477 aa7.35□□□□□ -1.23
ITGA6-208ENST00000469534 KDM5AP29375 1690 aaKnown RBP7.35□□□□□ -1.23
ITGA6-208ENST00000469534 ST20-MTHFSA0A0A6YYL1 179 aa7.34□□□□□ -1.23
ITGA6-208ENST00000469534 C11orf95C9JLR9 678 aaPredicted RBP7.34□□□□□ -1.23
ITGA6-208ENST00000469534 ANKK1Q8NFD2 765 aa7.34□□□□□ -1.23
ITGA6-208ENST00000469534 RBM33Q96EV2 1170 aaKnown RBP7.34□□□□□ -1.23
ITGA6-208ENST00000469534 SLC26A8Q96RN1 970 aa7.34□□□□□ -1.23
ITGA6-208ENST00000469534 WDR70Q9NW82 654 aa7.34□□□□□ -1.23
ITGA6-208ENST00000469534 POLR1AO95602 1720 aaPredicted RBP7.34□□□□□ -1.23
ITGA6-208ENST00000469534 ARHGEF28Q8N1W1 1705 aaKnown RBP7.34□□□□□ -1.23
ITGA6-208ENST00000469534 QRICH2Q9H0J4 1663 aa7.34□□□□□ -1.23
ITGA6-208ENST00000469534 LAMC1P11047 1609 aa7.34□□□□□ -1.24
ITGA6-208ENST00000469534 TRIM6-TRIM34B2RNG4 842 aa7.33□□□□□ -1.24
ITGA6-208ENST00000469534 CNGB1Q14028 1251 aaPredicted RBP7.33□□□□□ -1.24
ITGA6-208ENST00000469534 NBR1Q14596 966 aa7.33□□□□□ -1.24
ITGA6-208ENST00000469534 THEMISQ8N1K5 641 aaPredicted RBP7.33□□□□□ -1.24
ITGA6-208ENST00000469534 IRX2Q9BZI1 471 aaPredicted RBP7.33□□□□□ -1.24
ITGA6-208ENST00000469534 C14orf93Q9H972 538 aaKnown RBP7.33□□□□□ -1.24
ITGA6-208ENST00000469534 PRIM1P49642 420 aaKnown RBP7.32□□□□□ -1.24
ITGA6-208ENST00000469534 DDX10Q13206 875 aaKnown RBP7.32□□□□□ -1.24
ITGA6-208ENST00000469534 TSR1Q2NL82 804 aaKnown RBP7.32□□□□□ -1.24
ITGA6-208ENST00000469534 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.32□□□□□ -1.24
ITGA6-208ENST00000469534 EID1Q9Y6B2 187 aa7.32□□□□□ -1.24
ITGA6-208ENST00000469534 ADGRB1O14514 1584 aa7.32□□□□□ -1.24
ITGA6-208ENST00000469534 METP08581 1390 aa7.32□□□□□ -1.24
ITGA6-208ENST00000469534 SLIT1O75093 1534 aa7.32□□□□□ -1.24
ITGA6-208ENST00000469534 SCAF11Q99590 1463 aaKnown RBP7.31□□□□□ -1.24
ITGA6-208ENST00000469534 ARHGAP23Q9P227 1491 aa7.31□□□□□ -1.24
ITGA6-208ENST00000469534 ZFRQ96KR1 1074 aaKnown RBP7.31□□□□□ -1.24
ITGA6-208ENST00000469534 SETBP1Q9Y6X0 1596 aa7.31□□□□□ -1.24
ITGA6-208ENST00000469534 GPRASP1Q5JY77 1395 aa7.31□□□□□ -1.24
ITGA6-208ENST00000469534 ADAMTS13Q76LX8 1427 aa7.3□□□□□ -1.24
ITGA6-208ENST00000469534 SOWAHBA6NEL2 793 aa7.3□□□□□ -1.24
ITGA6-208ENST00000469534 MAP3K7O43318 606 aa7.3□□□□□ -1.24
ITGA6-208ENST00000469534 ITGBL1O95965 494 aaPredicted RBP7.3□□□□□ -1.24
ITGA6-208ENST00000469534 HDGFP51858 240 aaKnown RBP7.3□□□□□ -1.24
ITGA6-208ENST00000469534 TSKSQ9UJT2 592 aa7.3□□□□□ -1.24
ITGA6-208ENST00000469534 DISP3Q9P2K9 1392 aa7.3□□□□□ -1.24
ITGA6-208ENST00000469534 PLEKHG1Q9ULL1 1385 aa7.3□□□□□ -1.24
ITGA6-208ENST00000469534 PLEKHH1Q9ULM0 1364 aa7.3□□□□□ -1.24
ITGA6-208ENST00000469534 WASHC2AQ641Q2 1341 aa7.29□□□□□ -1.24
ITGA6-208ENST00000469534 MINK1Q8N4C8 1332 aaPredicted RBP7.29□□□□□ -1.24
ITGA6-208ENST00000469534 YTHDC2Q9H6S0 1430 aaKnown RBP7.29□□□□□ -1.24
ITGA6-208ENST00000469534 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
ITGA6-208ENST00000469534 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
ITGA6-208ENST00000469534 ANKLE2Q86XL3 938 aa7.29□□□□□ -1.24
ITGA6-208ENST00000469534 CCDC7Q96M83 1385 aa7.29□□□□□ -1.24
ITGA6-208ENST00000469534 LMTK3Q96Q04 1460 aa7.29□□□□□ -1.24
ITGA6-208ENST00000469534 KIF7Q2M1P5 1343 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 PTPRUQ92729 1446 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 GRXCR2A6NFK2 248 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 OSBPP22059 807 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 BCAMP50895 628 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 FAM98CQ17RN3 349 aaKnown RBP7.28□□□□□ -1.24
ITGA6-208ENST00000469534 PRAM1Q96QH2 718 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 TSHZ2Q9NRE2 1034 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 POGKQ9P215 609 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 SEPT9Q9UHD8 586 aaPredicted RBP7.28□□□□□ -1.24
ITGA6-208ENST00000469534 STRCQ7RTU9 1775 aa7.28□□□□□ -1.24
ITGA6-208ENST00000469534 CENPJQ9HC77 1338 aaPredicted RBP7.27□□□□□ -1.24
ITGA6-208ENST00000469534 NPHP4O75161 1426 aaPredicted RBP7.27□□□□□ -1.24
ITGA6-208ENST00000469534 KNDC1Q76NI1 1749 aa7.27□□□□□ -1.25
ITGA6-208ENST00000469534 NYAP1Q6ZVC0 841 aa7.27□□□□□ -1.25
ITGA6-208ENST00000469534 CERKQ8TCT0 537 aa7.27□□□□□ -1.25
ITGA6-208ENST00000469534 TESK2Q96S53 571 aa7.27□□□□□ -1.25
ITGA6-208ENST00000469534 FAM198AQ9UFP1 575 aa7.27□□□□□ -1.25
ITGA6-208ENST00000469534 EIF3AQ14152 1382 aaKnown RBP7.27□□□□□ -1.25
ITGA6-208ENST00000469534 CHD2O14647 1828 aaKnown RBP7.27□□□□□ -1.25
ITGA6-208ENST00000469534 STRCP1A6NGW2 1772 aa7.26□□□□□ -1.25
ITGA6-208ENST00000469534 LRPPRCP42704 1394 aaKnown RBP7.26□□□□□ -1.25
ITGA6-208ENST00000469534 NUTM2FA1L443 756 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms