RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 CARD10Q9BWT7 1032 aa18.06■□□□□ 0.48
GAPVD1-214ENST00000469528 AXIN2Q9Y2T1 843 aa18.06■□□□□ 0.48
GAPVD1-214ENST00000469528 KCNQ2O43526 872 aa18.05■□□□□ 0.48
GAPVD1-214ENST00000469528 QRICH2Q9H0J4 1663 aa18.05■□□□□ 0.48
GAPVD1-214ENST00000469528 PARP4Q9UKK3 1724 aaKnown RBP18.03■□□□□ 0.48
GAPVD1-214ENST00000469528 KTN1Q86UP2 1357 aaKnown RBP18.03■□□□□ 0.48
GAPVD1-214ENST00000469528 SLIT3O75094 1523 aa18.03■□□□□ 0.48
GAPVD1-214ENST00000469528 SOX12O15370 315 aa18.02■□□□□ 0.48
GAPVD1-214ENST00000469528 MARCH10Q8NA82 808 aaPredicted RBP18.01■□□□□ 0.47
GAPVD1-214ENST00000469528 BCL9O00512 1426 aa18■□□□□ 0.47
GAPVD1-214ENST00000469528 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
GAPVD1-214ENST00000469528 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
GAPVD1-214ENST00000469528 HDGFL2Q7Z4V5 671 aaPredicted RBP17.99■□□□□ 0.47
GAPVD1-214ENST00000469528 CCDC7Q96M83 1385 aa17.99■□□□□ 0.47
GAPVD1-214ENST00000469528 SLC24A1O60721 1099 aa17.98■□□□□ 0.47
GAPVD1-214ENST00000469528 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
GAPVD1-214ENST00000469528 RREB1Q92766 1687 aa17.98■□□□□ 0.47
GAPVD1-214ENST00000469528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.97■□□□□ 0.47
GAPVD1-214ENST00000469528 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
GAPVD1-214ENST00000469528 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
GAPVD1-214ENST00000469528 YY1P25490 414 aa17.96■□□□□ 0.47
GAPVD1-214ENST00000469528 PUS7Q96PZ0 661 aaKnown RBP17.96■□□□□ 0.47
GAPVD1-214ENST00000469528 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
GAPVD1-214ENST00000469528 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
GAPVD1-214ENST00000469528 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
GAPVD1-214ENST00000469528 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
GAPVD1-214ENST00000469528 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
GAPVD1-214ENST00000469528 COL18A1P39060 1754 aa17.94■□□□□ 0.46
GAPVD1-214ENST00000469528 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
GAPVD1-214ENST00000469528 TXNRD1Q16881 649 aa17.94■□□□□ 0.46
GAPVD1-214ENST00000469528 PROM2Q8N271 834 aa17.94■□□□□ 0.46
GAPVD1-214ENST00000469528 USP31Q70CQ4 1352 aa17.93■□□□□ 0.46
GAPVD1-214ENST00000469528 IL2RBP14784 551 aa17.93■□□□□ 0.46
GAPVD1-214ENST00000469528 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
GAPVD1-214ENST00000469528 SLC15A2Q16348 729 aa17.92■□□□□ 0.46
GAPVD1-214ENST00000469528 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
GAPVD1-214ENST00000469528 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
GAPVD1-214ENST00000469528 LRRC37A3O60309 1634 aa17.91■□□□□ 0.46
GAPVD1-214ENST00000469528 PTF1AQ7RTS3 328 aa17.91■□□□□ 0.46
GAPVD1-214ENST00000469528 ABCC6O95255 1503 aa17.91■□□□□ 0.46
GAPVD1-214ENST00000469528 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
GAPVD1-214ENST00000469528 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
GAPVD1-214ENST00000469528 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
GAPVD1-214ENST00000469528 ERBB3P21860 1342 aa17.9■□□□□ 0.46
GAPVD1-214ENST00000469528 NME9Q86XW9 330 aa17.89■□□□□ 0.45
GAPVD1-214ENST00000469528 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
GAPVD1-214ENST00000469528 ZBTB7AO95365 584 aa17.88■□□□□ 0.45
GAPVD1-214ENST00000469528 ANKRD24Q8TF21 1146 aa17.88■□□□□ 0.45
GAPVD1-214ENST00000469528 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
GAPVD1-214ENST00000469528 TONSLQ96HA7 1378 aa17.87■□□□□ 0.45
GAPVD1-214ENST00000469528 NFAT5O94916 1531 aa17.87■□□□□ 0.45
GAPVD1-214ENST00000469528 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
GAPVD1-214ENST00000469528 ACSBG1Q96GR2 724 aa17.86■□□□□ 0.45
GAPVD1-214ENST00000469528 MTFR1LQ9H019 292 aa17.86■□□□□ 0.45
GAPVD1-214ENST00000469528 EDC4Q6P2E9 1401 aaKnown RBP17.86■□□□□ 0.45
GAPVD1-214ENST00000469528 TNS2Q63HR2 1409 aa17.85■□□□□ 0.45
GAPVD1-214ENST00000469528 IP6K1Q92551 441 aa17.85■□□□□ 0.45
GAPVD1-214ENST00000469528 COG3Q96JB2 828 aa17.84■□□□□ 0.45
GAPVD1-214ENST00000469528 PTGER2P43116 358 aa17.83■□□□□ 0.44
GAPVD1-214ENST00000469528 PDGFDQ9GZP0 370 aaPredicted RBP17.83■□□□□ 0.44
GAPVD1-214ENST00000469528 WNK3Q9BYP7 1800 aa17.83■□□□□ 0.44
GAPVD1-214ENST00000469528 HMGB2P26583 209 aaKnown RBP17.82■□□□□ 0.44
GAPVD1-214ENST00000469528 MON2Q7Z3U7 1717 aa17.81■□□□□ 0.44
GAPVD1-214ENST00000469528 AMPHP49418 695 aa17.81■□□□□ 0.44
GAPVD1-214ENST00000469528 SLC27A3Q5K4L6 730 aa17.81■□□□□ 0.44
GAPVD1-214ENST00000469528 DDX54Q8TDD1 881 aaKnown RBP17.81■□□□□ 0.44
GAPVD1-214ENST00000469528 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
GAPVD1-214ENST00000469528 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
GAPVD1-214ENST00000469528 SLC16A10Q8TF71 515 aa17.8■□□□□ 0.44
GAPVD1-214ENST00000469528 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
GAPVD1-214ENST00000469528 LTV1Q96GA3 475 aaPredicted RBP17.79■□□□□ 0.44
GAPVD1-214ENST00000469528 ARXQ96QS3 562 aa17.79■□□□□ 0.44
GAPVD1-214ENST00000469528 FHDC1Q9C0D6 1143 aaPredicted RBP17.79■□□□□ 0.44
GAPVD1-214ENST00000469528 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
GAPVD1-214ENST00000469528 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
GAPVD1-214ENST00000469528 CASZ1Q86V15 1759 aa17.77■□□□□ 0.44
GAPVD1-214ENST00000469528 USP54Q70EL1 1684 aa17.77■□□□□ 0.43
GAPVD1-214ENST00000469528 ZCRB1Q8TBF4 217 aaKnown RBP17.76■□□□□ 0.43
GAPVD1-214ENST00000469528 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
GAPVD1-214ENST00000469528 POLD1P28340 1107 aa17.75■□□□□ 0.43
GAPVD1-214ENST00000469528 HOXC9P31274 260 aa17.75■□□□□ 0.43
GAPVD1-214ENST00000469528 TMF1P82094 1093 aa17.75■□□□□ 0.43
GAPVD1-214ENST00000469528 CDCA8Q53HL2 280 aa17.75■□□□□ 0.43
GAPVD1-214ENST00000469528 TESK2Q96S53 571 aa17.75■□□□□ 0.43
GAPVD1-214ENST00000469528 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
GAPVD1-214ENST00000469528 LTN1O94822 1766 aa17.75■□□□□ 0.43
GAPVD1-214ENST00000469528 NHSQ6T4R5 1651 aa17.74■□□□□ 0.43
GAPVD1-214ENST00000469528 TFCP2L1Q9NZI6 479 aa17.74■□□□□ 0.43
GAPVD1-214ENST00000469528 CGNL1Q0VF96 1302 aa17.73■□□□□ 0.43
GAPVD1-214ENST00000469528 PRIM1P49642 420 aaKnown RBP17.73■□□□□ 0.43
GAPVD1-214ENST00000469528 LRRC4BQ9NT99 713 aa17.73■□□□□ 0.43
GAPVD1-214ENST00000469528 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
GAPVD1-214ENST00000469528 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
GAPVD1-214ENST00000469528 RAPGEF4Q8WZA2 1011 aa17.71■□□□□ 0.43
GAPVD1-214ENST00000469528 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
GAPVD1-214ENST00000469528 GPR162Q16538 588 aa17.7■□□□□ 0.42
GAPVD1-214ENST00000469528 ZNF827Q17R98 1081 aa17.7■□□□□ 0.42
GAPVD1-214ENST00000469528 MAP3K5Q99683 1374 aa17.69■□□□□ 0.42
GAPVD1-214ENST00000469528 FYB1O15117 783 aa17.69■□□□□ 0.42
GAPVD1-214ENST00000469528 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms