RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 NME9Q86XW9 330 aa30.7■■■□□ 2.51
TTC28-204ENST00000468807 PARP4Q9UKK3 1724 aaKnown RBP30.7■■■□□ 2.5
TTC28-204ENST00000468807 TERF2IPQ9NYB0 399 aa30.69■■■□□ 2.5
TTC28-204ENST00000468807 NFAT5O94916 1531 aa30.68■■■□□ 2.5
TTC28-204ENST00000468807 WDR17Q8IZU2 1322 aa30.68■■■□□ 2.5
TTC28-204ENST00000468807 PSDA5PKW4 1024 aaPredicted RBP30.66■■■□□ 2.5
TTC28-204ENST00000468807 APBA3O96018 575 aa30.66■■■□□ 2.5
TTC28-204ENST00000468807 TESK2Q96S53 571 aa30.66■■■□□ 2.5
TTC28-204ENST00000468807 A0A1W2PP64 1363 aa30.66■■■□□ 2.5
TTC28-204ENST00000468807 EZH2Q15910 746 aaKnown RBP30.65■■■□□ 2.5
TTC28-204ENST00000468807 USP31Q70CQ4 1352 aa30.65■■■□□ 2.5
TTC28-204ENST00000468807 EDC4Q6P2E9 1401 aaKnown RBP30.64■■■□□ 2.5
TTC28-204ENST00000468807 PUS7Q96PZ0 661 aaKnown RBP30.64■■■□□ 2.5
TTC28-204ENST00000468807 PCGF6Q9BYE7 350 aa30.64■■■□□ 2.5
TTC28-204ENST00000468807 DISP2A7MBM2 1401 aa30.64■■■□□ 2.49
TTC28-204ENST00000468807 DDB1Q16531 1140 aa30.62■■■□□ 2.49
TTC28-204ENST00000468807 LRRC37A3O60309 1634 aa30.62■■■□□ 2.49
TTC28-204ENST00000468807 WNK3Q9BYP7 1800 aa30.61■■■□□ 2.49
TTC28-204ENST00000468807 SLC24A1O60721 1099 aa30.61■■■□□ 2.49
TTC28-204ENST00000468807 USP54Q70EL1 1684 aa30.61■■■□□ 2.49
TTC28-204ENST00000468807 LTN1O94822 1766 aa30.59■■■□□ 2.49
TTC28-204ENST00000468807 USP47Q96K76 1375 aa30.59■■■□□ 2.49
TTC28-204ENST00000468807 NINLQ9Y2I6 1382 aa30.58■■■□□ 2.49
TTC28-204ENST00000468807 CARD10Q9BWT7 1032 aa30.58■■■□□ 2.49
TTC28-204ENST00000468807 OVOS2A0A0G2JMS6 1433 aa30.57■■■□□ 2.48
TTC28-204ENST00000468807 OVOS2A0A0J9YW53 1432 aa30.57■■■□□ 2.48
TTC28-204ENST00000468807 OVOS2Q6IE36 1432 aa30.57■■■□□ 2.48
TTC28-204ENST00000468807 CAMKK2Q96RR4 588 aa30.57■■■□□ 2.48
TTC28-204ENST00000468807 ABCC6O95255 1503 aa30.57■■■□□ 2.48
TTC28-204ENST00000468807 TMF1P82094 1093 aa30.55■■■□□ 2.48
TTC28-204ENST00000468807 CDCA7Q9BWT1 371 aaPredicted RBP30.55■■■□□ 2.48
TTC28-204ENST00000468807 C11orf95C9JLR9 678 aaPredicted RBP30.54■■■□□ 2.48
TTC28-204ENST00000468807 R3HDM1Q15032 1099 aaKnown RBP30.54■■■□□ 2.48
TTC28-204ENST00000468807 PARD3Q8TEW0 1356 aa30.53■■■□□ 2.48
TTC28-204ENST00000468807 PEAK1Q9H792 1746 aa30.52■■■□□ 2.48
TTC28-204ENST00000468807 NLRP2Q9NX02 1062 aa30.51■■■□□ 2.47
TTC28-204ENST00000468807 CCDC7Q96M83 1385 aa30.51■■■□□ 2.47
TTC28-204ENST00000468807 ERBB3P21860 1342 aa30.49■■■□□ 2.47
TTC28-204ENST00000468807 SBF2Q86WG5 1849 aa30.48■■■□□ 2.47
TTC28-204ENST00000468807 MARCH10Q8NA82 808 aaPredicted RBP30.48■■■□□ 2.47
TTC28-204ENST00000468807 ANKRD24Q8TF21 1146 aa30.48■■■□□ 2.47
TTC28-204ENST00000468807 COG3Q96JB2 828 aa30.48■■■□□ 2.47
TTC28-204ENST00000468807 RREB1Q92766 1687 aa30.47■■■□□ 2.47
TTC28-204ENST00000468807 ANKRD36BQ8N2N9 1353 aa30.47■■■□□ 2.47
TTC28-204ENST00000468807 EXOC5O00471 708 aa30.47■■■□□ 2.47
TTC28-204ENST00000468807 NUP188Q5SRE5 1749 aa30.45■■■□□ 2.47
TTC28-204ENST00000468807 LRP5O75197 1615 aa30.45■■■□□ 2.47
TTC28-204ENST00000468807 TIMELESSQ9UNS1 1208 aa30.45■■■□□ 2.47
TTC28-204ENST00000468807 CLSPNQ9HAW4 1339 aa30.45■■■□□ 2.46
TTC28-204ENST00000468807 CDCA8Q53HL2 280 aa30.43■■■□□ 2.46
TTC28-204ENST00000468807 NBPF14Q5TI25 921 aa30.42■■■□□ 2.46
TTC28-204ENST00000468807 LTV1Q96GA3 475 aaPredicted RBP30.42■■■□□ 2.46
TTC28-204ENST00000468807 TNS2Q63HR2 1409 aa30.4■■■□□ 2.46
TTC28-204ENST00000468807 PTF1AQ7RTS3 328 aa30.4■■■□□ 2.46
TTC28-204ENST00000468807 IP6K1Q92551 441 aa30.4■■■□□ 2.46
TTC28-204ENST00000468807 BCL11BQ9C0K0 894 aaPredicted RBP30.4■■■□□ 2.46
TTC28-204ENST00000468807 IL2RBP14784 551 aa30.39■■■□□ 2.46
TTC28-204ENST00000468807 FBLN1P23142 703 aa30.38■■■□□ 2.45
TTC28-204ENST00000468807 AMPHP49418 695 aa30.38■■■□□ 2.45
TTC28-204ENST00000468807 GGNBP2Q9H3C7 697 aa30.37■■■□□ 2.45
TTC28-204ENST00000468807 MAP3K19Q56UN5 1328 aa30.37■■■□□ 2.45
TTC28-204ENST00000468807 BCL9O00512 1426 aa30.35■■■□□ 2.45
TTC28-204ENST00000468807 RGPD3A6NKT7 1758 aaPredicted RBP30.35■■■□□ 2.45
TTC28-204ENST00000468807 RGPD4Q7Z3J3 1758 aa30.35■■■□□ 2.45
TTC28-204ENST00000468807 PLSCR1O15162 318 aa30.34■■■□□ 2.45
TTC28-204ENST00000468807 CCER1Q8TC90 406 aaPredicted RBP30.34■■■□□ 2.45
TTC28-204ENST00000468807 FYB1O15117 783 aa30.33■■■□□ 2.45
TTC28-204ENST00000468807 HOXC9P31274 260 aa30.33■■■□□ 2.45
TTC28-204ENST00000468807 FAM208AQ9UK61 1670 aaKnown RBP30.33■■■□□ 2.45
TTC28-204ENST00000468807 KIF20BQ96Q89 1820 aa30.32■■■□□ 2.44
TTC28-204ENST00000468807 RRS1Q15050 365 aaKnown RBP30.31■■■□□ 2.44
TTC28-204ENST00000468807 ACSBG1Q96GR2 724 aa30.31■■■□□ 2.44
TTC28-204ENST00000468807 KAT6BQ8WYB5 2073 aa30.3■■■□□ 2.44
TTC28-204ENST00000468807 POLR3GLQ9BT43 218 aa30.29■■■□□ 2.44
TTC28-204ENST00000468807 MYOM1P52179 1685 aa30.29■■■□□ 2.44
TTC28-204ENST00000468807 KCNQ2O43526 872 aa30.28■■■□□ 2.44
TTC28-204ENST00000468807 NHSQ6T4R5 1651 aa30.26■■■□□ 2.43
TTC28-204ENST00000468807 RGPD2P0DJD1 1756 aa30.26■■■□□ 2.43
TTC28-204ENST00000468807 NSD3Q9BZ95 1437 aa30.25■■■□□ 2.43
TTC28-204ENST00000468807 RTL1A6NKG5 1358 aa30.25■■■□□ 2.43
TTC28-204ENST00000468807 DDX54Q8TDD1 881 aaKnown RBP30.24■■■□□ 2.43
TTC28-204ENST00000468807 CARD14Q9BXL6 1004 aa30.23■■■□□ 2.43
TTC28-204ENST00000468807 PROM2Q8N271 834 aa30.22■■■□□ 2.43
TTC28-204ENST00000468807 ANO8Q9HCE9 1232 aaPredicted RBP30.22■■■□□ 2.43
TTC28-204ENST00000468807 TXNRD1Q16881 649 aa30.21■■■□□ 2.43
TTC28-204ENST00000468807 SMG6Q86US8 1419 aaKnown RBP30.2■■■□□ 2.42
TTC28-204ENST00000468807 BTAF1O14981 1849 aa30.17■■■□□ 2.42
TTC28-204ENST00000468807 EIF4G2P78344 907 aaKnown RBP eCLIP30.17■■■□□ 2.42
TTC28-204ENST00000468807 USHBP1Q8N6Y0 703 aa30.17■■■□□ 2.42
TTC28-204ENST00000468807 STK32BQ9NY57 414 aa30.16■■■□□ 2.42
TTC28-204ENST00000468807 HSP90AB2PQ58FF8 381 aa30.15■■■□□ 2.42
TTC28-204ENST00000468807 NBPF6Q5VWK0 638 aa30.15■■■□□ 2.42
TTC28-204ENST00000468807 NBPF4Q96M43 638 aa30.15■■■□□ 2.42
TTC28-204ENST00000468807 SPON1Q9HCB6 807 aa30.15■■■□□ 2.42
TTC28-204ENST00000468807 MEGF6O75095 1541 aa30.14■■■□□ 2.42
TTC28-204ENST00000468807 HSPA5P11021 654 aaKnown RBP30.14■■■□□ 2.42
TTC28-204ENST00000468807 FLT4P35916 1363 aa30.14■■■□□ 2.41
TTC28-204ENST00000468807 PPP1R1BQ9UD71 204 aaPredicted RBP30.13■■■□□ 2.41
TTC28-204ENST00000468807 PPM1GO15355 546 aaPredicted RBP30.12■■■□□ 2.41
TTC28-204ENST00000468807 ZCRB1Q8TBF4 217 aaKnown RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms