RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 MTHFSP49914 203 aa15.22■□□□□ 0.03
MSH5-214ENST00000468602 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
MSH5-214ENST00000468602 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.22■□□□□ 0.03
MSH5-214ENST00000468602 CAMTA1Q9Y6Y1 1673 aa15.22■□□□□ 0.03
MSH5-214ENST00000468602 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
MSH5-214ENST00000468602 PRDM11Q9NQV5 511 aa15.21■□□□□ 0.03
MSH5-214ENST00000468602 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.03
MSH5-214ENST00000468602 FBLN1P23142 703 aa15.2■□□□□ 0.02
MSH5-214ENST00000468602 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
MSH5-214ENST00000468602 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
MSH5-214ENST00000468602 PLCH1Q4KWH8 1693 aa15.19■□□□□ 0.02
MSH5-214ENST00000468602 POTEAQ6S8J7 498 aa15.19■□□□□ 0.02
MSH5-214ENST00000468602 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
MSH5-214ENST00000468602 RGPD1P0DJD0 1748 aa15.19■□□□□ 0.02
MSH5-214ENST00000468602 NRAPQ86VF7 1730 aa15.19■□□□□ 0.02
MSH5-214ENST00000468602 ERBB3P21860 1342 aa15.18■□□□□ 0.02
MSH5-214ENST00000468602 AMPHP49418 695 aa15.18■□□□□ 0.02
MSH5-214ENST00000468602 HAP1P54257 671 aaPredicted RBP15.18■□□□□ 0.02
MSH5-214ENST00000468602 BCL9LQ86UU0 1499 aa15.18■□□□□ 0.02
MSH5-214ENST00000468602 IL13P35225 146 aa15.17■□□□□ 0.02
MSH5-214ENST00000468602 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
MSH5-214ENST00000468602 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
MSH5-214ENST00000468602 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
MSH5-214ENST00000468602 TNNT2P45379 298 aaPredicted RBP15.16■□□□□ 0.02
MSH5-214ENST00000468602 WDR17Q8IZU2 1322 aa15.16■□□□□ 0.02
MSH5-214ENST00000468602 KDRP35968 1356 aa15.15■□□□□ 0.02
MSH5-214ENST00000468602 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
MSH5-214ENST00000468602 DIAPH1O60610 1272 aaKnown RBP15.14■□□□□ 0.01
MSH5-214ENST00000468602 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
MSH5-214ENST00000468602 UNC5CLQ8IV45 518 aa15.14■□□□□ 0.01
MSH5-214ENST00000468602 NUTM2BA6NNL0 878 aaPredicted RBP15.13■□□□□ 0.01
MSH5-214ENST00000468602 NUTM2EB1AL46 878 aaPredicted RBP15.13■□□□□ 0.01
MSH5-214ENST00000468602 SOX12O15370 315 aa15.13■□□□□ 0.01
MSH5-214ENST00000468602 ADAMTS2O95450 1211 aa15.13■□□□□ 0.01
MSH5-214ENST00000468602 CRB1P82279 1406 aa15.13■□□□□ 0.01
MSH5-214ENST00000468602 CHRNA2Q15822 529 aa15.13■□□□□ 0.01
MSH5-214ENST00000468602 NUTM2AQ8IVF1 878 aaPredicted RBP15.13■□□□□ 0.01
MSH5-214ENST00000468602 ANKRD24Q8TF21 1146 aa15.13■□□□□ 0.01
MSH5-214ENST00000468602 CARD10Q9BWT7 1032 aa15.13■□□□□ 0.01
MSH5-214ENST00000468602 BTG4Q9NY30 223 aa15.13■□□□□ 0.01
MSH5-214ENST00000468602 VPS72Q15906 364 aa15.12■□□□□ 0.01
MSH5-214ENST00000468602 MIER1Q8N108 512 aa15.12■□□□□ 0.01
MSH5-214ENST00000468602 PNISRQ8TF01 805 aaKnown RBP15.12■□□□□ 0.01
MSH5-214ENST00000468602 NUDCQ9Y266 331 aa15.12■□□□□ 0.01
MSH5-214ENST00000468602 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
MSH5-214ENST00000468602 ATRNO75882 1429 aa15.11■□□□□ 0.01
MSH5-214ENST00000468602 NGLY1Q96IV0 654 aa15.11■□□□□ 0.01
MSH5-214ENST00000468602 EYA1Q99502 592 aa15.1■□□□□ 0.01
MSH5-214ENST00000468602 SPATA31A5Q5VU36 1347 aa15.1■□□□□ 0.01
MSH5-214ENST00000468602 SPATA31A7Q8IWB4 1347 aa15.1■□□□□ 0.01
MSH5-214ENST00000468602 PPM1GO15355 546 aaPredicted RBP15.09■□□□□ 0.01
MSH5-214ENST00000468602 FCHSD2O94868 740 aa15.09■□□□□ 0.01
MSH5-214ENST00000468602 ZNF772Q68DY9 489 aaPredicted RBP15.09■□□□□ 0.01
MSH5-214ENST00000468602 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
MSH5-214ENST00000468602 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.01
MSH5-214ENST00000468602 C8orf37Q96NL8 207 aa15.09■□□□□ 0.01
MSH5-214ENST00000468602 AFF2P51816 1311 aa15.09■□□□□ 0.01
MSH5-214ENST00000468602 ONECUT3O60422 494 aaPredicted RBP15.08■□□□□ 0
MSH5-214ENST00000468602 CCDC184Q52MB2 194 aa15.08■□□□□ 0
MSH5-214ENST00000468602 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
MSH5-214ENST00000468602 MEX3CQ5U5Q3 659 aaKnown RBP15.08■□□□□ 0
MSH5-214ENST00000468602 NBPF6Q5VWK0 638 aa15.08■□□□□ 0
MSH5-214ENST00000468602 NBPF4Q96M43 638 aa15.08■□□□□ 0
MSH5-214ENST00000468602 USP21Q9UK80 565 aa15.08■□□□□ 0
MSH5-214ENST00000468602 SPATA31A1Q5TZJ5 1347 aa15.08■□□□□ 0
MSH5-214ENST00000468602 DISP2A7MBM2 1401 aa15.08■□□□□ 0
MSH5-214ENST00000468602 CDCA7Q9BWT1 371 aaPredicted RBP15.07■□□□□ 0
MSH5-214ENST00000468602 MRS2Q9HD23 443 aa15.07■□□□□ 0
MSH5-214ENST00000468602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 0
MSH5-214ENST00000468602 TRPC5Q9UL62 973 aaPredicted RBP15.07■□□□□ 0
MSH5-214ENST00000468602 RGPD2P0DJD1 1756 aa15.06■□□□□ 0
MSH5-214ENST00000468602 EVA1CP58658 441 aa15.06■□□□□ 0
MSH5-214ENST00000468602 CNGB1Q14028 1251 aaPredicted RBP15.06■□□□□ 0
MSH5-214ENST00000468602 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
MSH5-214ENST00000468602 PNNQ9H307 717 aaKnown RBP15.05■□□□□ -0
MSH5-214ENST00000468602 WNK3Q9BYP7 1800 aa15.05■□□□□ -0
MSH5-214ENST00000468602 GLI3P10071 1580 aa15.04■□□□□ -0
MSH5-214ENST00000468602 PLEKHG5O94827 1062 aa15.04■□□□□ -0
MSH5-214ENST00000468602 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
MSH5-214ENST00000468602 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
MSH5-214ENST00000468602 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
MSH5-214ENST00000468602 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
MSH5-214ENST00000468602 TOM1L2Q6ZVM7 507 aa15.03■□□□□ -0
MSH5-214ENST00000468602 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
MSH5-214ENST00000468602 PKD1L3Q7Z443 1732 aa15.03■□□□□ -0
MSH5-214ENST00000468602 OVOS2A0A0G2JMS6 1433 aa15.02■□□□□ -0
MSH5-214ENST00000468602 ZBTB7CA1YPR0 619 aa15.02■□□□□ -0
MSH5-214ENST00000468602 CSB-PGBD3P0DP91 1061 aa15.02■□□□□ -0
MSH5-214ENST00000468602 NLRP2Q9NX02 1062 aa15.02■□□□□ -0
MSH5-214ENST00000468602 ADAMTS8Q9UP79 889 aa15.02■□□□□ -0
MSH5-214ENST00000468602 PARP4Q9UKK3 1724 aaKnown RBP15.02□□□□□ -0.01
MSH5-214ENST00000468602 U2AF1L5P0DN76 240 aaPredicted RBP15.01□□□□□ -0.01
MSH5-214ENST00000468602 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
MSH5-214ENST00000468602 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
MSH5-214ENST00000468602 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
MSH5-214ENST00000468602 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
MSH5-214ENST00000468602 QTRT2Q9H974 415 aaKnown RBP15.01□□□□□ -0.01
MSH5-214ENST00000468602 STRN4Q9NRL3 753 aa15.01□□□□□ -0.01
MSH5-214ENST00000468602 IL2RBP14784 551 aa15□□□□□ -0.01
MSH5-214ENST00000468602 AMOTQ4VCS5 1084 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms