RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 NBPF8Q3BBV2 869 aa5□□□□□ -1.61
TRIM59-202ENST00000468542 TMEM132EQ6IEE7 984 aa5□□□□□ -1.61
TRIM59-202ENST00000468542 AKAP12Q02952 1782 aa5□□□□□ -1.61
TRIM59-202ENST00000468542 MARF1Q9Y4F3 1742 aaKnown RBP5□□□□□ -1.61
TRIM59-202ENST00000468542 ANKARQ7Z5J8 1434 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 TULP4Q9NRJ4 1543 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 PTGER2P43116 358 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 NLRP6P59044 892 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 VARS2Q5ST30 1063 aaKnown RBP4.99□□□□□ -1.61
TRIM59-202ENST00000468542 C14orf37Q86TY3 774 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 PUS7Q96PZ0 661 aaKnown RBP4.99□□□□□ -1.61
TRIM59-202ENST00000468542 PRAM1Q96QH2 718 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 CARD11Q9BXL7 1154 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 SLAIN2Q9P270 581 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 ABCA3Q99758 1704 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 ATP7BP35670 1465 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 NRKQ7Z2Y5 1582 aa4.99□□□□□ -1.61
TRIM59-202ENST00000468542 CENPJQ9HC77 1338 aaPredicted RBP4.98□□□□□ -1.61
TRIM59-202ENST00000468542 PHLPP1O60346 1717 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 MON2Q7Z3U7 1717 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 UBAP1LF5GYI3 381 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 WAPLQ7Z5K2 1190 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 MFRPQ9BY79 579 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 POGKQ9P215 609 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 STK26Q9P289 416 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 TRAK1Q9UPV9 953 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 PLEKHH1Q9ULM0 1364 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 C1orf167Q5SNV9 1468 aa4.98□□□□□ -1.61
TRIM59-202ENST00000468542 MED1Q15648 1581 aaPredicted RBP4.98□□□□□ -1.61
TRIM59-202ENST00000468542 PXDNQ92626 1479 aa4.97□□□□□ -1.61
TRIM59-202ENST00000468542 WASLO00401 505 aaPredicted RBP4.97□□□□□ -1.61
TRIM59-202ENST00000468542 ARSIQ5FYB1 569 aa4.97□□□□□ -1.61
TRIM59-202ENST00000468542 KHSRPQ92945 711 aaKnown RBP eCLIP4.97□□□□□ -1.61
TRIM59-202ENST00000468542 MYOM1P52179 1685 aa4.96□□□□□ -1.61
TRIM59-202ENST00000468542 BRD4O60885 1362 aaPredicted RBP4.96□□□□□ -1.62
TRIM59-202ENST00000468542 ATAD2Q6PL18 1390 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 USP47Q96K76 1375 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 NINLQ9Y2I6 1382 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 CDCA8Q53HL2 280 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 POTEEQ6S8J3 1075 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 BRINP3Q76B58 766 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 TESK2Q96S53 571 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.96□□□□□ -1.62
TRIM59-202ENST00000468542 PHRF1Q9P1Y6 1649 aaKnown RBP4.96□□□□□ -1.62
TRIM59-202ENST00000468542 NPHP3Q7Z494 1330 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 EVC2Q86UK5 1308 aa4.96□□□□□ -1.62
TRIM59-202ENST00000468542 POLR3AO14802 1390 aaPredicted RBP4.95□□□□□ -1.62
TRIM59-202ENST00000468542 PLEKHG3A1L390 1219 aa4.95□□□□□ -1.62
TRIM59-202ENST00000468542 ZNF316A6NFI3 1004 aaPredicted RBP4.95□□□□□ -1.62
TRIM59-202ENST00000468542 SLC34A2O95436 690 aa4.95□□□□□ -1.62
TRIM59-202ENST00000468542 ZEB1P37275 1124 aaPredicted RBP4.95□□□□□ -1.62
TRIM59-202ENST00000468542 RBM33Q96EV2 1170 aaKnown RBP4.95□□□□□ -1.62
TRIM59-202ENST00000468542 BCL11BQ9C0K0 894 aaPredicted RBP4.95□□□□□ -1.62
TRIM59-202ENST00000468542 SSH2Q76I76 1423 aa4.95□□□□□ -1.62
TRIM59-202ENST00000468542 SOS2Q07890 1332 aaPredicted RBP4.95□□□□□ -1.62
TRIM59-202ENST00000468542 NWD2Q9ULI1 1742 aa4.94□□□□□ -1.62
TRIM59-202ENST00000468542 ST20-MTHFSA0A0A6YYL1 179 aa4.94□□□□□ -1.62
TRIM59-202ENST00000468542 EIF4G2P78344 907 aaKnown RBP eCLIP4.94□□□□□ -1.62
TRIM59-202ENST00000468542 CDK19Q9BWU1 502 aa4.94□□□□□ -1.62
TRIM59-202ENST00000468542 MINK1Q8N4C8 1332 aaPredicted RBP4.94□□□□□ -1.62
TRIM59-202ENST00000468542 SBNO1A3KN83 1393 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 C2orf72A6NCS6 295 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 PIP4K2BP78356 416 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 TMF1P82094 1093 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 CPSF1Q10570 1443 aaKnown RBP4.93□□□□□ -1.62
TRIM59-202ENST00000468542 SAFB2Q14151 953 aaKnown RBP eCLIP4.93□□□□□ -1.62
TRIM59-202ENST00000468542 ESCO1Q5FWF5 840 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 LRRC59Q96AG4 307 aaKnown RBP4.93□□□□□ -1.62
TRIM59-202ENST00000468542 NUDT16Q96DE0 195 aaKnown RBP4.93□□□□□ -1.62
TRIM59-202ENST00000468542 HIRIP3Q9BW71 556 aaPredicted RBP4.93□□□□□ -1.62
TRIM59-202ENST00000468542 ANKRD26Q9UPS8 1709 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 CD163L1Q9NR16 1453 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 SPATA31A6Q5VVP1 1343 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 PRR36Q9H6K5 1346 aa4.93□□□□□ -1.62
TRIM59-202ENST00000468542 PIK3C2AO00443 1686 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 ABCC6O95255 1503 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 JCADQ9P266 1359 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 NRAPQ86VF7 1730 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 COL18A1P39060 1754 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 PBX2P40425 430 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 SRPK2P78362 688 aaKnown RBP4.92□□□□□ -1.62
TRIM59-202ENST00000468542 PSME1Q06323 249 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 ORAI2Q96SN7 254 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 LMO7Q8WWI1 1683 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 SLIT3O75094 1523 aa4.92□□□□□ -1.62
TRIM59-202ENST00000468542 ARHGEF10O15013 1369 aa4.91□□□□□ -1.62
TRIM59-202ENST00000468542 FOXO3O43524 673 aa4.91□□□□□ -1.62
TRIM59-202ENST00000468542 HSPA1LP34931 641 aa4.91□□□□□ -1.62
TRIM59-202ENST00000468542 STK24Q9Y6E0 443 aa4.91□□□□□ -1.62
TRIM59-202ENST00000468542 SPATA31A3Q5VYP0 1347 aa4.91□□□□□ -1.62
TRIM59-202ENST00000468542 EP400Q96L91 3159 aa4.91□□□□□ -1.62
TRIM59-202ENST00000468542 PNPLA6Q8IY17 1366 aa4.91□□□□□ -1.62
TRIM59-202ENST00000468542 LRP6O75581 1613 aa4.9□□□□□ -1.62
TRIM59-202ENST00000468542 PPIP5K1Q6PFW1 1433 aa4.9□□□□□ -1.62
TRIM59-202ENST00000468542 PLCH1Q4KWH8 1693 aa4.9□□□□□ -1.62
TRIM59-202ENST00000468542 PPP1R37O75864 691 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 HSPA5P11021 654 aaKnown RBP4.9□□□□□ -1.63
TRIM59-202ENST00000468542 NGDNQ8NEJ9 315 aaKnown RBP4.9□□□□□ -1.63
TRIM59-202ENST00000468542 TERF2IPQ9NYB0 399 aa4.9□□□□□ -1.63
TRIM59-202ENST00000468542 PLA2G2EQ9NZK7 142 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms