RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 NFATC2IPQ8NCF5 419 aa6□□□□□ -1.45
HMGB1P25-201ENST00000468402 FAM200AQ8TCP9 573 aa6□□□□□ -1.45
HMGB1P25-201ENST00000468402 GNEQ9Y223 722 aaKnown RBP6□□□□□ -1.45
HMGB1P25-201ENST00000468402 POTECB2RU33 542 aa5.99□□□□□ -1.45
HMGB1P25-201ENST00000468402 C11orf95C9JLR9 678 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P25-201ENST00000468402 ACTN4O43707 911 aaKnown RBP5.99□□□□□ -1.45
HMGB1P25-201ENST00000468402 RNF19BQ6ZMZ0 732 aa5.99□□□□□ -1.45
HMGB1P25-201ENST00000468402 RNF135Q8IUD6 432 aa5.99□□□□□ -1.45
HMGB1P25-201ENST00000468402 ZMIZ1Q9ULJ6 1067 aa5.99□□□□□ -1.45
HMGB1P25-201ENST00000468402 PCDHB9Q9Y5E1 797 aa5.99□□□□□ -1.45
HMGB1P25-201ENST00000468402 PTK2Q05397 1052 aa5.98□□□□□ -1.45
HMGB1P25-201ENST00000468402 ZNF592Q92610 1267 aa5.98□□□□□ -1.45
HMGB1P25-201ENST00000468402 MAP10Q9P2G4 905 aa5.98□□□□□ -1.45
HMGB1P25-201ENST00000468402 BIN2Q9UBW5 565 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P25-201ENST00000468402 FAM196BA6NMK8 535 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L15C9J2P7 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L10C9JJH3 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L13C9JLJ4 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L12C9JPN9 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L11C9JVI0 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L21D6R901 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L18D6R9N7 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L22D6RA61 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L17D6RBQ6 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L19D6RCP7 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L20D6RJB6 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 ATP5J2-PTCD1G3V325 749 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 WFS1O76024 890 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 FMNL1O95466 1100 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 USP17L24Q0WX57 530 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 NCOA4Q13772 614 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 CRTC2Q53ET0 693 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 TREML4Q6UXN2 200 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 PLEKHM2Q8IWE5 1019 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 ANKLE1Q8NAG6 615 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 FAM174AQ8TBP5 190 aa5.97□□□□□ -1.45
HMGB1P25-201ENST00000468402 INSM1Q01101 510 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P25-201ENST00000468402 CYP4X1Q8N118 509 aa5.96□□□□□ -1.46
HMGB1P25-201ENST00000468402 ARMC2Q8NEN0 867 aa5.96□□□□□ -1.46
HMGB1P25-201ENST00000468402 CDCA7Q9BWT1 371 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P25-201ENST00000468402 CEP126Q9P2H0 1117 aa5.96□□□□□ -1.46
HMGB1P25-201ENST00000468402 RBM19Q9Y4C8 960 aaKnown RBP5.96□□□□□ -1.46
HMGB1P25-201ENST00000468402 ZC3H4Q9UPT8 1303 aaKnown RBP5.96□□□□□ -1.46
HMGB1P25-201ENST00000468402 AXIN1O15169 862 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 IGSF3O75054 1194 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 NR1I2O75469 434 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 JUNDP17535 347 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 ATP2B4P23634 1241 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 SSFA2P28290 1259 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 PRR20EP86478 221 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 PRR20CP86479 221 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 PRR20DP86480 221 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 PRR20BP86481 221 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 PRR20AP86496 221 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 PTPRNQ16849 979 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 EML3Q32P44 896 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 BRICD5Q6PL45 260 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 TXNDC2Q86VQ3 553 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 SCUBE3Q8IX30 993 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 PLPP7Q8NBV4 271 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 ZNF594Q96JF6 807 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 SLC6A16Q9GZN6 736 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 USP35Q9P2H5 1018 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 SHROOM4Q9ULL8 1493 aa5.95□□□□□ -1.46
HMGB1P25-201ENST00000468402 TTC24A2A3L6 582 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 MCCD1P59942 119 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 KCNH2Q12809 1159 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 DPYDQ12882 1025 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 PTK7Q13308 1070 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 PHLDB3Q6NSJ2 640 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 TRIM67Q6ZTA4 783 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 ZBTB33Q86T24 672 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 ANKMY2Q8IV38 441 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 OGFOD1Q8N543 542 aa5.94□□□□□ -1.46
HMGB1P25-201ENST00000468402 LOC105371045A0A1W2PR82 267 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 ZBTB24O43167 697 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 LZTS3O60299 673 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 F12P00748 615 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 SERPINB4P48594 390 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 MARSP56192 900 aaKnown RBP5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 NBPF14Q5TI25 921 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 LIAT1Q6ZQX7 453 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 TRIM50Q86XT4 487 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 DZIP3Q86Y13 1208 aaKnown RBP5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 ARHGAP9Q9BRR9 750 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 AAASQ9NRG9 546 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 STK17AQ9UEE5 414 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 NOD1Q9Y239 953 aa5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 SALL2Q9Y467 1007 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P25-201ENST00000468402 FAM181BA6NEQ2 426 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 SOWAHDA6NJG2 315 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 ADH1BP00325 375 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 ABL1P00519 1130 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 CCNYL3P0C7X3 344 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 ERCC3P19447 782 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 ATP1A2P50993 1020 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 PSME1Q06323 249 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 MAP7D1Q3KQU3 841 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 PDXDC2PQ6P474 469 aa5.92□□□□□ -1.46
HMGB1P25-201ENST00000468402 CLP1Q92989 425 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms