RNA–Protein interactions for RNA: ENST00000467854.1

CNTNAP3B-204, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 1,238 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-204ENST00000467854 POLKQ9UBT6 870 aa30.43■■■□□ 2.46
CNTNAP3B-204ENST00000467854 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.42■■■□□ 2.46
CNTNAP3B-204ENST00000467854 AMPHP49418 695 aa30.42■■■□□ 2.46
CNTNAP3B-204ENST00000467854 AFF2P51816 1311 aa30.42■■■□□ 2.46
CNTNAP3B-204ENST00000467854 FLT4P35916 1363 aa30.41■■■□□ 2.46
CNTNAP3B-204ENST00000467854 KIF24Q5T7B8 1368 aa30.41■■■□□ 2.46
CNTNAP3B-204ENST00000467854 PPM1GO15355 546 aaPredicted RBP30.4■■■□□ 2.46
CNTNAP3B-204ENST00000467854 HOXC9P31274 260 aa30.4■■■□□ 2.46
CNTNAP3B-204ENST00000467854 BTG4Q9NY30 223 aa30.4■■■□□ 2.46
CNTNAP3B-204ENST00000467854 BLMP54132 1417 aaPredicted RBP30.39■■■□□ 2.46
CNTNAP3B-204ENST00000467854 COL5A2P05997 1499 aaPredicted RBP30.39■■■□□ 2.46
CNTNAP3B-204ENST00000467854 CDK12Q9NYV4 1490 aaPredicted RBP30.39■■■□□ 2.46
CNTNAP3B-204ENST00000467854 RALBP1Q15311 655 aa30.39■■■□□ 2.46
CNTNAP3B-204ENST00000467854 FNBP4Q8N3X1 1017 aaPredicted RBP30.39■■■□□ 2.46
CNTNAP3B-204ENST00000467854 IP6K1Q92551 441 aa30.38■■■□□ 2.45
CNTNAP3B-204ENST00000467854 AXIN2Q9Y2T1 843 aa30.38■■■□□ 2.45
CNTNAP3B-204ENST00000467854 BCL9LQ86UU0 1499 aa30.38■■■□□ 2.45
CNTNAP3B-204ENST00000467854 PPP2R1AP30153 589 aa30.37■■■□□ 2.45
CNTNAP3B-204ENST00000467854 PRKRIP1Q9H875 184 aaPredicted RBP30.37■■■□□ 2.45
CNTNAP3B-204ENST00000467854 USP21Q9UK80 565 aa30.35■■■□□ 2.45
CNTNAP3B-204ENST00000467854 INSRP06213 1382 aa30.33■■■□□ 2.45
CNTNAP3B-204ENST00000467854 MTHFSP49914 203 aa30.33■■■□□ 2.45
CNTNAP3B-204ENST00000467854 PHF23Q9BUL5 403 aaPredicted RBP30.33■■■□□ 2.45
CNTNAP3B-204ENST00000467854 STRN4Q9NRL3 753 aa30.33■■■□□ 2.45
CNTNAP3B-204ENST00000467854 FAM208AQ9UK61 1670 aaKnown RBP30.33■■■□□ 2.45
CNTNAP3B-204ENST00000467854 ANP32CO43423 234 aa30.32■■■□□ 2.44
CNTNAP3B-204ENST00000467854 HSP90AB2PQ58FF8 381 aa30.32■■■□□ 2.44
CNTNAP3B-204ENST00000467854 UNC5CLQ8IV45 518 aa30.32■■■□□ 2.44
CNTNAP3B-204ENST00000467854 MYBBP1AQ9BQG0 1328 aaKnown RBP30.31■■■□□ 2.44
CNTNAP3B-204ENST00000467854 ERBB3P21860 1342 aa30.3■■■□□ 2.44
CNTNAP3B-204ENST00000467854 ANKRD24Q8TF21 1146 aa30.29■■■□□ 2.44
CNTNAP3B-204ENST00000467854 LTV1Q96GA3 475 aaPredicted RBP30.29■■■□□ 2.44
CNTNAP3B-204ENST00000467854 COL3A1P02461 1466 aaPredicted RBP30.28■■■□□ 2.44
CNTNAP3B-204ENST00000467854 EVA1CP58658 441 aa30.28■■■□□ 2.44
CNTNAP3B-204ENST00000467854 ATRNO75882 1429 aa30.28■■■□□ 2.44
CNTNAP3B-204ENST00000467854 DIEXFQ68CQ4 756 aaKnown RBP30.27■■■□□ 2.44
CNTNAP3B-204ENST00000467854 ZNF772Q68DY9 489 aaPredicted RBP30.27■■■□□ 2.44
CNTNAP3B-204ENST00000467854 RGPD2P0DJD1 1756 aa30.27■■■□□ 2.44
CNTNAP3B-204ENST00000467854 WDR17Q8IZU2 1322 aa30.26■■■□□ 2.44
CNTNAP3B-204ENST00000467854 CSB-PGBD3P0DP91 1061 aa30.26■■■□□ 2.43
CNTNAP3B-204ENST00000467854 LARP1Q6PKG0 1096 aaKnown RBP30.26■■■□□ 2.43
CNTNAP3B-204ENST00000467854 CRB1P82279 1406 aa30.24■■■□□ 2.43
CNTNAP3B-204ENST00000467854 RGS17Q9UGC6 210 aaPredicted RBP30.24■■■□□ 2.43
CNTNAP3B-204ENST00000467854 VPS72Q15906 364 aa30.23■■■□□ 2.43
CNTNAP3B-204ENST00000467854 EIF4A2Q14240 407 aaKnown RBP30.22■■■□□ 2.43
CNTNAP3B-204ENST00000467854 TRPC5Q9UL62 973 aaPredicted RBP30.22■■■□□ 2.43
CNTNAP3B-204ENST00000467854 GLI3P10071 1580 aa30.21■■■□□ 2.43
CNTNAP3B-204ENST00000467854 TOM1L2Q6ZVM7 507 aa30.21■■■□□ 2.43
CNTNAP3B-204ENST00000467854 CFAP53Q96M91 514 aa30.21■■■□□ 2.43
CNTNAP3B-204ENST00000467854 CCDC9Q9Y3X0 531 aaKnown RBP30.21■■■□□ 2.43
CNTNAP3B-204ENST00000467854 WNK3Q9BYP7 1800 aa30.19■■■□□ 2.42
CNTNAP3B-204ENST00000467854 RGPD1P0DJD0 1748 aa30.19■■■□□ 2.42
CNTNAP3B-204ENST00000467854 SOCS7O14512 581 aa30.18■■■□□ 2.42
CNTNAP3B-204ENST00000467854 QTRT2Q9H974 415 aaKnown RBP30.18■■■□□ 2.42
CNTNAP3B-204ENST00000467854 NLRP2Q9NX02 1062 aa30.18■■■□□ 2.42
CNTNAP3B-204ENST00000467854 SPATA31A5Q5VU36 1347 aa30.18■■■□□ 2.42
CNTNAP3B-204ENST00000467854 SPATA31A7Q8IWB4 1347 aa30.18■■■□□ 2.42
CNTNAP3B-204ENST00000467854 SPATA31A1Q5TZJ5 1347 aa30.17■■■□□ 2.42
CNTNAP3B-204ENST00000467854 USP35Q9P2H5 1018 aa30.16■■■□□ 2.42
CNTNAP3B-204ENST00000467854 DIAPH1O60610 1272 aaKnown RBP30.15■■■□□ 2.42
CNTNAP3B-204ENST00000467854 IL13P35225 146 aa30.15■■■□□ 2.42
CNTNAP3B-204ENST00000467854 NBPF6Q5VWK0 638 aa30.14■■■□□ 2.42
CNTNAP3B-204ENST00000467854 POTEAQ6S8J7 498 aa30.14■■■□□ 2.42
CNTNAP3B-204ENST00000467854 GJD4Q96KN9 370 aaPredicted RBP30.14■■■□□ 2.42
CNTNAP3B-204ENST00000467854 NBPF4Q96M43 638 aa30.14■■■□□ 2.42
CNTNAP3B-204ENST00000467854 CARD10Q9BWT7 1032 aa30.14■■■□□ 2.42
CNTNAP3B-204ENST00000467854 USHBP1Q8N6Y0 703 aa30.12■■■□□ 2.41
CNTNAP3B-204ENST00000467854 NCAPD2Q15021 1401 aa30.12■■■□□ 2.41
CNTNAP3B-204ENST00000467854 EYA1Q99502 592 aa30.11■■■□□ 2.41
CNTNAP3B-204ENST00000467854 TCP11L2Q8N4U5 519 aa30.1■■■□□ 2.41
CNTNAP3B-204ENST00000467854 IGSF1Q8N6C5 1336 aa30.1■■■□□ 2.41
CNTNAP3B-204ENST00000467854 THSD7AQ9UPZ6 1657 aa30.08■■■□□ 2.41
CNTNAP3B-204ENST00000467854 RBM6P78332 1123 aaKnown RBP30.08■■■□□ 2.41
CNTNAP3B-204ENST00000467854 PARP4Q9UKK3 1724 aaKnown RBP30.06■■■□□ 2.4
CNTNAP3B-204ENST00000467854 U2SURPO15042 1029 aaKnown RBP30.06■■■□□ 2.4
CNTNAP3B-204ENST00000467854 CCDC184Q52MB2 194 aa30.06■■■□□ 2.4
CNTNAP3B-204ENST00000467854 THRAP3Q9Y2W1 955 aaKnown RBP30.06■■■□□ 2.4
CNTNAP3B-204ENST00000467854 DISP2A7MBM2 1401 aa30.05■■■□□ 2.4
CNTNAP3B-204ENST00000467854 RXRBP28702 533 aa30.05■■■□□ 2.4
CNTNAP3B-204ENST00000467854 FAM98CQ17RN3 349 aaKnown RBP30.05■■■□□ 2.4
CNTNAP3B-204ENST00000467854 NUDCQ9Y266 331 aa30.05■■■□□ 2.4
CNTNAP3B-204ENST00000467854 BARGINQ6ZT62 677 aa30.04■■■□□ 2.4
CNTNAP3B-204ENST00000467854 MEGF6O75095 1541 aa30.04■■■□□ 2.4
CNTNAP3B-204ENST00000467854 LRRC37A3O60309 1634 aa30.04■■■□□ 2.4
CNTNAP3B-204ENST00000467854 AEBP1Q8IUX7 1158 aa30.02■■■□□ 2.4
CNTNAP3B-204ENST00000467854 MRS2Q9HD23 443 aa30.02■■■□□ 2.4
CNTNAP3B-204ENST00000467854 KDRP35968 1356 aa30.01■■■□□ 2.39
CNTNAP3B-204ENST00000467854 RGS12O14924 1447 aa30■■■□□ 2.39
CNTNAP3B-204ENST00000467854 HMOX1P09601 288 aa30■■■□□ 2.39
CNTNAP3B-204ENST00000467854 IL2RBP14784 551 aa30■■■□□ 2.39
CNTNAP3B-204ENST00000467854 SULT6B1Q6IMI4 303 aa30■■■□□ 2.39
CNTNAP3B-204ENST00000467854 MIER1Q8N108 512 aa30■■■□□ 2.39
CNTNAP3B-204ENST00000467854 A0A0G2JS52 829 aa29.99■■■□□ 2.39
CNTNAP3B-204ENST00000467854 MYT1Q01538 1121 aa29.99■■■□□ 2.39
CNTNAP3B-204ENST00000467854 U2AF1L5P0DN76 240 aaPredicted RBP29.98■■■□□ 2.39
CNTNAP3B-204ENST00000467854 U2AF1Q01081 240 aaKnown RBP eCLIP29.98■■■□□ 2.39
CNTNAP3B-204ENST00000467854 RAPGEF4Q8WZA2 1011 aa29.97■■■□□ 2.39
CNTNAP3B-204ENST00000467854 OVOS2A0A0G2JMS6 1433 aa29.96■■■□□ 2.39
CNTNAP3B-204ENST00000467854 PKD1L3Q7Z443 1732 aa29.96■■■□□ 2.39
CNTNAP3B-204ENST00000467854 CDCA7Q9BWT1 371 aaPredicted RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms