RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 POLR3AO14802 1390 aaPredicted RBP15.55■□□□□ 0.08
PRPF3-203ENST00000467514 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
PRPF3-203ENST00000467514 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
PRPF3-203ENST00000467514 USP19O94966 1318 aa15.54■□□□□ 0.08
PRPF3-203ENST00000467514 GCP02774 474 aa15.54■□□□□ 0.08
PRPF3-203ENST00000467514 FHDC1Q9C0D6 1143 aaPredicted RBP15.54■□□□□ 0.08
PRPF3-203ENST00000467514 PDGFDQ9GZP0 370 aaPredicted RBP15.54■□□□□ 0.08
PRPF3-203ENST00000467514 WNK3Q9BYP7 1800 aa15.53■□□□□ 0.08
PRPF3-203ENST00000467514 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
PRPF3-203ENST00000467514 SRPK2P78362 688 aaKnown RBP15.53■□□□□ 0.08
PRPF3-203ENST00000467514 CSB-PGBD3P0DP91 1061 aa15.51■□□□□ 0.07
PRPF3-203ENST00000467514 KLHL34Q8N239 644 aa15.51■□□□□ 0.07
PRPF3-203ENST00000467514 SYT17Q9BSW7 474 aa15.51■□□□□ 0.07
PRPF3-203ENST00000467514 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
PRPF3-203ENST00000467514 UTRNP46939 3433 aa15.5■□□□□ 0.07
PRPF3-203ENST00000467514 PTGER2P43116 358 aa15.5■□□□□ 0.07
PRPF3-203ENST00000467514 NLRP6P59044 892 aa15.5■□□□□ 0.07
PRPF3-203ENST00000467514 MTFR1LQ9H019 292 aa15.5■□□□□ 0.07
PRPF3-203ENST00000467514 PLEKHG3A1L390 1219 aa15.49■□□□□ 0.07
PRPF3-203ENST00000467514 GIGYF1O75420 1035 aaPredicted RBP15.49■□□□□ 0.07
PRPF3-203ENST00000467514 SLC15A2Q16348 729 aa15.49■□□□□ 0.07
PRPF3-203ENST00000467514 GPR162Q16538 588 aa15.49■□□□□ 0.07
PRPF3-203ENST00000467514 TXNRD1Q16881 649 aa15.49■□□□□ 0.07
PRPF3-203ENST00000467514 PTF1AQ7RTS3 328 aa15.49■□□□□ 0.07
PRPF3-203ENST00000467514 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
PRPF3-203ENST00000467514 STAC3Q96MF2 364 aa15.49■□□□□ 0.07
PRPF3-203ENST00000467514 CDCA7Q9BWT1 371 aaPredicted RBP15.48■□□□□ 0.07
PRPF3-203ENST00000467514 AATKQ6ZMQ8 1374 aa15.48■□□□□ 0.07
PRPF3-203ENST00000467514 SOX12O15370 315 aa15.47■□□□□ 0.07
PRPF3-203ENST00000467514 ARXQ96QS3 562 aa15.47■□□□□ 0.07
PRPF3-203ENST00000467514 WDR17Q8IZU2 1322 aa15.46■□□□□ 0.07
PRPF3-203ENST00000467514 IFFO2Q5TF58 517 aa15.46■□□□□ 0.07
PRPF3-203ENST00000467514 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
PRPF3-203ENST00000467514 KAT6BQ8WYB5 2073 aa15.45■□□□□ 0.06
PRPF3-203ENST00000467514 PROM2Q8N271 834 aa15.45■□□□□ 0.06
PRPF3-203ENST00000467514 QRICH2Q9H0J4 1663 aa15.44■□□□□ 0.06
PRPF3-203ENST00000467514 RGPD5Q99666 1765 aa15.44■□□□□ 0.06
PRPF3-203ENST00000467514 EXOC5O00471 708 aa15.44■□□□□ 0.06
PRPF3-203ENST00000467514 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
PRPF3-203ENST00000467514 BRD4O60885 1362 aaPredicted RBP15.44■□□□□ 0.06
PRPF3-203ENST00000467514 SLIT3O75094 1523 aa15.43■□□□□ 0.06
PRPF3-203ENST00000467514 ACSBG1Q96GR2 724 aa15.42■□□□□ 0.06
PRPF3-203ENST00000467514 USP6P35125 1406 aa15.42■□□□□ 0.06
PRPF3-203ENST00000467514 CPSF1Q10570 1443 aaKnown RBP15.42■□□□□ 0.06
PRPF3-203ENST00000467514 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
PRPF3-203ENST00000467514 NHSQ6T4R5 1651 aa15.41■□□□□ 0.06
PRPF3-203ENST00000467514 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
PRPF3-203ENST00000467514 BCL9O00512 1426 aa15.41■□□□□ 0.06
PRPF3-203ENST00000467514 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
PRPF3-203ENST00000467514 COL18A1P39060 1754 aa15.4■□□□□ 0.06
PRPF3-203ENST00000467514 POLD1P28340 1107 aa15.4■□□□□ 0.06
PRPF3-203ENST00000467514 CARD10Q9BWT7 1032 aa15.4■□□□□ 0.06
PRPF3-203ENST00000467514 CABP1Q9NZU7 370 aa15.4■□□□□ 0.06
PRPF3-203ENST00000467514 TNS2Q63HR2 1409 aa15.4■□□□□ 0.06
PRPF3-203ENST00000467514 TRPM1Q7Z4N2 1603 aa15.39■□□□□ 0.05
PRPF3-203ENST00000467514 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
PRPF3-203ENST00000467514 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
PRPF3-203ENST00000467514 CCDC7Q96M83 1385 aa15.38■□□□□ 0.05
PRPF3-203ENST00000467514 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
PRPF3-203ENST00000467514 MAP3K5Q99683 1374 aa15.37■□□□□ 0.05
PRPF3-203ENST00000467514 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRPF3-203ENST00000467514 SGIP1Q9BQI5 828 aa15.37■□□□□ 0.05
PRPF3-203ENST00000467514 BTAF1O14981 1849 aa15.37■□□□□ 0.05
PRPF3-203ENST00000467514 NLRP2Q9NX02 1062 aa15.35■□□□□ 0.05
PRPF3-203ENST00000467514 ABCC6O95255 1503 aa15.34■□□□□ 0.05
PRPF3-203ENST00000467514 CEP350Q5VT06 3117 aa15.34■□□□□ 0.05
PRPF3-203ENST00000467514 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
PRPF3-203ENST00000467514 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
PRPF3-203ENST00000467514 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
PRPF3-203ENST00000467514 PAPPAQ13219 1627 aa15.34■□□□□ 0.05
PRPF3-203ENST00000467514 ZNF827Q17R98 1081 aa15.33■□□□□ 0.04
PRPF3-203ENST00000467514 EVC2Q86UK5 1308 aa15.33■□□□□ 0.04
PRPF3-203ENST00000467514 USP47Q96K76 1375 aa15.33■□□□□ 0.04
PRPF3-203ENST00000467514 GOLGB1Q14789 3259 aaKnown RBP15.33■□□□□ 0.04
PRPF3-203ENST00000467514 MSH5O43196 834 aa15.32■□□□□ 0.04
PRPF3-203ENST00000467514 TFCP2L1Q9NZI6 479 aa15.32■□□□□ 0.04
PRPF3-203ENST00000467514 IL2RBP14784 551 aa15.31■□□□□ 0.04
PRPF3-203ENST00000467514 SLC16A10Q8TF71 515 aa15.31■□□□□ 0.04
PRPF3-203ENST00000467514 TTC21BQ7Z4L5 1316 aa15.31■□□□□ 0.04
PRPF3-203ENST00000467514 ROCK2O75116 1388 aaKnown RBP15.31■□□□□ 0.04
PRPF3-203ENST00000467514 SHANK3Q9BYB0 1731 aa15.31■□□□□ 0.04
PRPF3-203ENST00000467514 TTC21AQ8NDW8 1320 aa15.3■□□□□ 0.04
PRPF3-203ENST00000467514 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
PRPF3-203ENST00000467514 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
PRPF3-203ENST00000467514 CARD11Q9BXL7 1154 aa15.3■□□□□ 0.04
PRPF3-203ENST00000467514 QSER1Q2KHR3 1735 aa15.29■□□□□ 0.04
PRPF3-203ENST00000467514 GRIN3BO60391 1043 aa15.29■□□□□ 0.04
PRPF3-203ENST00000467514 LTN1O94822 1766 aa15.29■□□□□ 0.04
PRPF3-203ENST00000467514 NFAT5O94916 1531 aa15.28■□□□□ 0.04
PRPF3-203ENST00000467514 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
PRPF3-203ENST00000467514 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
PRPF3-203ENST00000467514 TUBGCP6Q96RT7 1819 aa15.27■□□□□ 0.04
PRPF3-203ENST00000467514 SLC27A3Q5K4L6 730 aa15.27■□□□□ 0.04
PRPF3-203ENST00000467514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRPF3-203ENST00000467514 LRRC4BQ9NT99 713 aa15.27■□□□□ 0.04
PRPF3-203ENST00000467514 ERBB3P21860 1342 aa15.26■□□□□ 0.03
PRPF3-203ENST00000467514 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
PRPF3-203ENST00000467514 DDX54Q8TDD1 881 aaKnown RBP15.26■□□□□ 0.03
PRPF3-203ENST00000467514 GPBP1L1Q9HC44 474 aaPredicted RBP15.26■□□□□ 0.03
PRPF3-203ENST00000467514 PNPLA7Q6ZV29 1317 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms