RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 OVOS2A0A0J9YW53 1432 aa20.45■□□□□ 0.86
RB1-202ENST00000467505 OVOS2Q6IE36 1432 aa20.45■□□□□ 0.86
RB1-202ENST00000467505 RREB1Q92766 1687 aa20.45■□□□□ 0.86
RB1-202ENST00000467505 R3HDM1Q15032 1099 aaKnown RBP20.45■□□□□ 0.86
RB1-202ENST00000467505 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
RB1-202ENST00000467505 DDB1Q16531 1140 aa20.44■□□□□ 0.86
RB1-202ENST00000467505 ARHGEF25Q86VW2 580 aa20.44■□□□□ 0.86
RB1-202ENST00000467505 LRRC37A3O60309 1634 aa20.44■□□□□ 0.86
RB1-202ENST00000467505 RGPD5Q99666 1765 aa20.44■□□□□ 0.86
RB1-202ENST00000467505 ABCC6O95255 1503 aa20.43■□□□□ 0.86
RB1-202ENST00000467505 NBPF14Q5TI25 921 aa20.42■□□□□ 0.86
RB1-202ENST00000467505 NUP188Q5SRE5 1749 aa20.41■□□□□ 0.86
RB1-202ENST00000467505 SOX12O15370 315 aa20.41■□□□□ 0.86
RB1-202ENST00000467505 CSB-PGBD3P0DP91 1061 aa20.41■□□□□ 0.86
RB1-202ENST00000467505 HDGFL2Q7Z4V5 671 aaPredicted RBP20.41■□□□□ 0.86
RB1-202ENST00000467505 USP54Q70EL1 1684 aa20.41■□□□□ 0.86
RB1-202ENST00000467505 RGPD3A6NKT7 1758 aaPredicted RBP20.4■□□□□ 0.86
RB1-202ENST00000467505 NFAT5O94916 1531 aa20.4■□□□□ 0.86
RB1-202ENST00000467505 RGPD4Q7Z3J3 1758 aa20.4■□□□□ 0.86
RB1-202ENST00000467505 SBF2Q86WG5 1849 aa20.4■□□□□ 0.86
RB1-202ENST00000467505 PEAK1Q9H792 1746 aa20.4■□□□□ 0.86
RB1-202ENST00000467505 SLC24A1O60721 1099 aa20.39■□□□□ 0.85
RB1-202ENST00000467505 TMC1Q8TDI8 760 aa20.39■□□□□ 0.85
RB1-202ENST00000467505 AXIN2Q9Y2T1 843 aa20.39■□□□□ 0.85
RB1-202ENST00000467505 USP31Q70CQ4 1352 aa20.38■□□□□ 0.85
RB1-202ENST00000467505 PUS7Q96PZ0 661 aaKnown RBP20.38■□□□□ 0.85
RB1-202ENST00000467505 CARD10Q9BWT7 1032 aa20.38■□□□□ 0.85
RB1-202ENST00000467505 TERF2IPQ9NYB0 399 aa20.38■□□□□ 0.85
RB1-202ENST00000467505 CCDC7Q96M83 1385 aa20.37■□□□□ 0.85
RB1-202ENST00000467505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
RB1-202ENST00000467505 LTN1O94822 1766 aa20.36■□□□□ 0.85
RB1-202ENST00000467505 EDC4Q6P2E9 1401 aaKnown RBP20.36■□□□□ 0.85
RB1-202ENST00000467505 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
RB1-202ENST00000467505 BCL9O00512 1426 aa20.34■□□□□ 0.85
RB1-202ENST00000467505 NINLQ9Y2I6 1382 aa20.34■□□□□ 0.85
RB1-202ENST00000467505 EXOC5O00471 708 aa20.33■□□□□ 0.85
RB1-202ENST00000467505 PLSCR1O15162 318 aa20.33■□□□□ 0.85
RB1-202ENST00000467505 BCL11BQ9C0K0 894 aaPredicted RBP20.33■□□□□ 0.85
RB1-202ENST00000467505 SLC12A5Q9H2X9 1139 aa20.32■□□□□ 0.84
RB1-202ENST00000467505 NME9Q86XW9 330 aa20.31■□□□□ 0.84
RB1-202ENST00000467505 MARCH10Q8NA82 808 aaPredicted RBP20.3■□□□□ 0.84
RB1-202ENST00000467505 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
RB1-202ENST00000467505 ERBB3P21860 1342 aa20.29■□□□□ 0.84
RB1-202ENST00000467505 TNS2Q63HR2 1409 aa20.29■□□□□ 0.84
RB1-202ENST00000467505 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
RB1-202ENST00000467505 NLRP2Q9NX02 1062 aa20.27■□□□□ 0.84
RB1-202ENST00000467505 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
RB1-202ENST00000467505 ST20-MTHFSA0A0A6YYL1 179 aa20.25■□□□□ 0.83
RB1-202ENST00000467505 IL2RBP14784 551 aa20.25■□□□□ 0.83
RB1-202ENST00000467505 ANKRD24Q8TF21 1146 aa20.25■□□□□ 0.83
RB1-202ENST00000467505 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
RB1-202ENST00000467505 TESK2Q96S53 571 aa20.24■□□□□ 0.83
RB1-202ENST00000467505 NHSQ6T4R5 1651 aa20.23■□□□□ 0.83
RB1-202ENST00000467505 PPP1R1BQ9UD71 204 aaPredicted RBP20.23■□□□□ 0.83
RB1-202ENST00000467505 KCNQ2O43526 872 aa20.22■□□□□ 0.83
RB1-202ENST00000467505 COG3Q96JB2 828 aa20.22■□□□□ 0.83
RB1-202ENST00000467505 TMF1P82094 1093 aa20.2■□□□□ 0.82
RB1-202ENST00000467505 IP6K1Q92551 441 aa20.2■□□□□ 0.82
RB1-202ENST00000467505 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.82
RB1-202ENST00000467505 KAT6BQ8WYB5 2073 aa20.19■□□□□ 0.82
RB1-202ENST00000467505 TXNRD1Q16881 649 aa20.19■□□□□ 0.82
RB1-202ENST00000467505 PTF1AQ7RTS3 328 aa20.19■□□□□ 0.82
RB1-202ENST00000467505 STK32BQ9NY57 414 aa20.19■□□□□ 0.82
RB1-202ENST00000467505 CDCA8Q53HL2 280 aa20.18■□□□□ 0.82
RB1-202ENST00000467505 CASZ1Q86V15 1759 aa20.18■□□□□ 0.82
RB1-202ENST00000467505 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
RB1-202ENST00000467505 ANO8Q9HCE9 1232 aaPredicted RBP20.17■□□□□ 0.82
RB1-202ENST00000467505 USP47Q96K76 1375 aa20.17■□□□□ 0.82
RB1-202ENST00000467505 AMPHP49418 695 aa20.16■□□□□ 0.82
RB1-202ENST00000467505 PROM2Q8N271 834 aa20.16■□□□□ 0.82
RB1-202ENST00000467505 BTAF1O14981 1849 aa20.15■□□□□ 0.82
RB1-202ENST00000467505 LTV1Q96GA3 475 aaPredicted RBP20.14■□□□□ 0.81
RB1-202ENST00000467505 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
RB1-202ENST00000467505 RTL1A6NKG5 1358 aa20.13■□□□□ 0.81
RB1-202ENST00000467505 MAP3K19Q56UN5 1328 aa20.13■□□□□ 0.81
RB1-202ENST00000467505 SLC15A2Q16348 729 aa20.13■□□□□ 0.81
RB1-202ENST00000467505 HOXC9P31274 260 aa20.12■□□□□ 0.81
RB1-202ENST00000467505 KIF20BQ96Q89 1820 aa20.11■□□□□ 0.81
RB1-202ENST00000467505 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
RB1-202ENST00000467505 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
RB1-202ENST00000467505 DDX54Q8TDD1 881 aaKnown RBP20.09■□□□□ 0.81
RB1-202ENST00000467505 RGPD2P0DJD1 1756 aa20.08■□□□□ 0.81
RB1-202ENST00000467505 ZBTB7AO95365 584 aa20.08■□□□□ 0.81
RB1-202ENST00000467505 FYB1O15117 783 aa20.07■□□□□ 0.8
RB1-202ENST00000467505 MTFR1LQ9H019 292 aa20.07■□□□□ 0.8
RB1-202ENST00000467505 GGNBP2Q9H3C7 697 aa20.07■□□□□ 0.8
RB1-202ENST00000467505 CGNL1Q0VF96 1302 aa20.06■□□□□ 0.8
RB1-202ENST00000467505 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
RB1-202ENST00000467505 PAPPAQ13219 1627 aa20.06■□□□□ 0.8
RB1-202ENST00000467505 DOT1LQ8TEK3 1739 aa20.05■□□□□ 0.8
RB1-202ENST00000467505 SLC27A3Q5K4L6 730 aa20.05■□□□□ 0.8
RB1-202ENST00000467505 ZCRB1Q8TBF4 217 aaKnown RBP20.05■□□□□ 0.8
RB1-202ENST00000467505 KIF24Q5T7B8 1368 aa20.05■□□□□ 0.8
RB1-202ENST00000467505 MYOM1P52179 1685 aa20.04■□□□□ 0.8
RB1-202ENST00000467505 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
RB1-202ENST00000467505 PDGFDQ9GZP0 370 aaPredicted RBP20.04■□□□□ 0.8
RB1-202ENST00000467505 SHANK3Q9BYB0 1731 aa20.03■□□□□ 0.8
RB1-202ENST00000467505 FBLN1P23142 703 aa20.03■□□□□ 0.8
RB1-202ENST00000467505 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
RB1-202ENST00000467505 SYTL4Q96C24 671 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms