RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TIMP2P16035 220 aa9.3□□□□□ -0.92
LRCH3-212ENST00000466845 MCCD1P59942 119 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-212ENST00000466845 CCDC125Q86Z20 511 aa9.3□□□□□ -0.92
LRCH3-212ENST00000466845 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
LRCH3-212ENST00000466845 PRM3Q9NNZ6 103 aa9.3□□□□□ -0.92
LRCH3-212ENST00000466845 SCARF1Q14162 830 aa9.29□□□□□ -0.92
LRCH3-212ENST00000466845 NBPF20Q3BBV1 942 aa9.29□□□□□ -0.92
LRCH3-212ENST00000466845 TRIM34Q9BYJ4 488 aa9.29□□□□□ -0.92
LRCH3-212ENST00000466845 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
LRCH3-212ENST00000466845 ADAM32Q8TC27 787 aa9.28□□□□□ -0.92
LRCH3-212ENST00000466845 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
LRCH3-212ENST00000466845 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
LRCH3-212ENST00000466845 ZIC2O95409 532 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-212ENST00000466845 ZNF775Q96BV0 537 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-212ENST00000466845 GJD4Q96KN9 370 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-212ENST00000466845 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-212ENST00000466845 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-212ENST00000466845 GTF3C3Q9Y5Q9 886 aa9.27□□□□□ -0.93
LRCH3-212ENST00000466845 ZBBXA8MT70 800 aa9.26□□□□□ -0.93
LRCH3-212ENST00000466845 UPP2O95045 317 aa9.26□□□□□ -0.93
LRCH3-212ENST00000466845 FSHRP23945 695 aa9.26□□□□□ -0.93
LRCH3-212ENST00000466845 MRPL14Q6P1L8 145 aaKnown RBP9.26□□□□□ -0.93
LRCH3-212ENST00000466845 DZIP3Q86Y13 1208 aaKnown RBP9.26□□□□□ -0.93
LRCH3-212ENST00000466845 NR3C2P08235 984 aa9.25□□□□□ -0.93
LRCH3-212ENST00000466845 TRIM46Q7Z4K8 759 aa9.25□□□□□ -0.93
LRCH3-212ENST00000466845 SEPT12Q8IYM1 358 aa9.25□□□□□ -0.93
LRCH3-212ENST00000466845 NDUFB9Q9Y6M9 179 aa9.25□□□□□ -0.93
LRCH3-212ENST00000466845 ITPKCQ96DU7 683 aa9.24□□□□□ -0.93
LRCH3-212ENST00000466845 OCSTAMPQ9BR26 566 aa9.24□□□□□ -0.93
LRCH3-212ENST00000466845 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
LRCH3-212ENST00000466845 PPP1R26Q5T8A7 1209 aaPredicted RBP9.22□□□□□ -0.93
LRCH3-212ENST00000466845 ZFP42Q96MM3 310 aa9.22□□□□□ -0.93
LRCH3-212ENST00000466845 SNRPBP14678 240 aaKnown RBP9.21□□□□□ -0.94
LRCH3-212ENST00000466845 NPAS3Q8IXF0 933 aa9.21□□□□□ -0.94
LRCH3-212ENST00000466845 MEIOBQ8N635 442 aa9.21□□□□□ -0.94
LRCH3-212ENST00000466845 MTMR14Q8NCE2 650 aa9.21□□□□□ -0.94
LRCH3-212ENST00000466845 BMP1P13497 986 aa9.2□□□□□ -0.94
LRCH3-212ENST00000466845 NR1H3Q13133 447 aa9.2□□□□□ -0.94
LRCH3-212ENST00000466845 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
LRCH3-212ENST00000466845 ZFAND3Q9H8U3 227 aa9.2□□□□□ -0.94
LRCH3-212ENST00000466845 ESPNB1AK53 854 aa9.19□□□□□ -0.94
LRCH3-212ENST00000466845 INTS6LQ5JSJ4 861 aaKnown RBP9.19□□□□□ -0.94
LRCH3-212ENST00000466845 TREML4Q6UXN2 200 aa9.19□□□□□ -0.94
LRCH3-212ENST00000466845 Q6ZVU0 165 aa9.19□□□□□ -0.94
LRCH3-212ENST00000466845 SNRKQ9NRH2 765 aa9.18□□□□□ -0.94
LRCH3-212ENST00000466845 FBXO45P0C2W1 286 aa9.17□□□□□ -0.94
LRCH3-212ENST00000466845 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
LRCH3-212ENST00000466845 PURBQ96QR8 312 aaKnown RBP9.17□□□□□ -0.94
LRCH3-212ENST00000466845 BMP2P12643 396 aa9.16□□□□□ -0.94
LRCH3-212ENST00000466845 NPM2Q86SE8 214 aaKnown RBP9.16□□□□□ -0.94
LRCH3-212ENST00000466845 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
LRCH3-212ENST00000466845 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
LRCH3-212ENST00000466845 WFS1O76024 890 aa9.15□□□□□ -0.94
LRCH3-212ENST00000466845 NXF1Q9UBU9 619 aaKnown RBP9.15□□□□□ -0.94
LRCH3-212ENST00000466845 PCDHB9Q9Y5E1 797 aa9.15□□□□□ -0.94
LRCH3-212ENST00000466845 ERVH48-1M5A8F1 160 aa9.12□□□□□ -0.95
LRCH3-212ENST00000466845 SPINT1O43278 529 aa9.12□□□□□ -0.95
LRCH3-212ENST00000466845 MAN1A2O60476 641 aa9.12□□□□□ -0.95
LRCH3-212ENST00000466845 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
LRCH3-212ENST00000466845 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
LRCH3-212ENST00000466845 SOS2Q07890 1332 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-212ENST00000466845 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
LRCH3-212ENST00000466845 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
LRCH3-212ENST00000466845 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-212ENST00000466845 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
LRCH3-212ENST00000466845 GPR37L1O60883 481 aa9.09□□□□□ -0.95
LRCH3-212ENST00000466845 ADH1AP07327 375 aa9.09□□□□□ -0.95
LRCH3-212ENST00000466845 CBLBQ13191 982 aa9.09□□□□□ -0.95
LRCH3-212ENST00000466845 TMEM132AQ24JP5 1023 aa9.09□□□□□ -0.95
LRCH3-212ENST00000466845 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.09□□□□□ -0.95
LRCH3-212ENST00000466845 ZNF784Q8NCA9 323 aaPredicted RBP9.09□□□□□ -0.95
LRCH3-212ENST00000466845 TTLL8A6PVC2 850 aa9.08□□□□□ -0.96
LRCH3-212ENST00000466845 LILRA1O75019 489 aa9.08□□□□□ -0.96
LRCH3-212ENST00000466845 FLIIQ13045 1269 aa9.08□□□□□ -0.96
LRCH3-212ENST00000466845 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
LRCH3-212ENST00000466845 SOX11P35716 441 aa9.07□□□□□ -0.96
LRCH3-212ENST00000466845 RAB15P59190 212 aa9.07□□□□□ -0.96
LRCH3-212ENST00000466845 IRF7Q92985 503 aa9.07□□□□□ -0.96
LRCH3-212ENST00000466845 ESF1Q9H501 851 aaKnown RBP9.07□□□□□ -0.96
LRCH3-212ENST00000466845 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
LRCH3-212ENST00000466845 TBC1D2BQ9UPU7 963 aa9.07□□□□□ -0.96
LRCH3-212ENST00000466845 WIPF1O43516 503 aa9.06□□□□□ -0.96
LRCH3-212ENST00000466845 PTGIRP43119 386 aa9.06□□□□□ -0.96
LRCH3-212ENST00000466845 MCM6Q14566 821 aa9.06□□□□□ -0.96
LRCH3-212ENST00000466845 CC2D2BQ6DHV5 1058 aa9.06□□□□□ -0.96
LRCH3-212ENST00000466845 CEP126Q9P2H0 1117 aa9.06□□□□□ -0.96
LRCH3-212ENST00000466845 H3BM21 787 aa9.05□□□□□ -0.96
LRCH3-212ENST00000466845 ERVK-9P63128 1117 aa9.05□□□□□ -0.96
LRCH3-212ENST00000466845 ADD1P35611 737 aaKnown RBP9.04□□□□□ -0.96
LRCH3-212ENST00000466845 ATP5J2-PTCD1G3V325 749 aa9.03□□□□□ -0.96
LRCH3-212ENST00000466845 GPC1P35052 558 aa9.03□□□□□ -0.96
LRCH3-212ENST00000466845 INSM1Q01101 510 aaPredicted RBP9.03□□□□□ -0.96
LRCH3-212ENST00000466845 RELBQ01201 579 aa9.03□□□□□ -0.96
LRCH3-212ENST00000466845 IRF5Q13568 498 aa9.03□□□□□ -0.96
LRCH3-212ENST00000466845 GDPD2Q9HCC8 539 aa9.03□□□□□ -0.96
LRCH3-212ENST00000466845 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
LRCH3-212ENST00000466845 CYP2U1Q7Z449 544 aa9.02□□□□□ -0.97
LRCH3-212ENST00000466845 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
LRCH3-212ENST00000466845 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
LRCH3-212ENST00000466845 AGBL1Q96MI9 1066 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms