RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 NINLQ9Y2I6 1382 aa22.3■■□□□ 1.16
COL16A1-207ENST00000466829 BAG6P46379 1132 aa22.3■■□□□ 1.16
COL16A1-207ENST00000466829 CDCA8Q53HL2 280 aa22.3■■□□□ 1.16
COL16A1-207ENST00000466829 EDC4Q6P2E9 1401 aaKnown RBP22.3■■□□□ 1.16
COL16A1-207ENST00000466829 FAM196AQ6ZSG2 479 aa22.29■■□□□ 1.16
COL16A1-207ENST00000466829 CRB1P82279 1406 aa22.29■■□□□ 1.16
COL16A1-207ENST00000466829 LMO7Q8WWI1 1683 aa22.29■■□□□ 1.16
COL16A1-207ENST00000466829 USP31Q70CQ4 1352 aa22.27■■□□□ 1.16
COL16A1-207ENST00000466829 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
COL16A1-207ENST00000466829 WDR17Q8IZU2 1322 aa22.26■■□□□ 1.15
COL16A1-207ENST00000466829 TRIM37O94972 964 aa22.25■■□□□ 1.15
COL16A1-207ENST00000466829 MON2Q7Z3U7 1717 aa22.25■■□□□ 1.15
COL16A1-207ENST00000466829 COG3Q96JB2 828 aa22.24■■□□□ 1.15
COL16A1-207ENST00000466829 EN1Q05925 392 aaPredicted RBP22.22■■□□□ 1.15
COL16A1-207ENST00000466829 DDB1Q16531 1140 aa22.22■■□□□ 1.15
COL16A1-207ENST00000466829 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
COL16A1-207ENST00000466829 POLR3GLQ9BT43 218 aa22.21■■□□□ 1.15
COL16A1-207ENST00000466829 CARD10Q9BWT7 1032 aa22.21■■□□□ 1.15
COL16A1-207ENST00000466829 ANKRD36BQ8N2N9 1353 aa22.21■■□□□ 1.15
COL16A1-207ENST00000466829 NFAT5O94916 1531 aa22.21■■□□□ 1.15
COL16A1-207ENST00000466829 NLRP2Q9NX02 1062 aa22.2■■□□□ 1.14
COL16A1-207ENST00000466829 APBA3O96018 575 aa22.19■■□□□ 1.14
COL16A1-207ENST00000466829 CDCA7Q9BWT1 371 aaPredicted RBP22.19■■□□□ 1.14
COL16A1-207ENST00000466829 COL18A1P39060 1754 aa22.17■■□□□ 1.14
COL16A1-207ENST00000466829 C11orf95C9JLR9 678 aaPredicted RBP22.16■■□□□ 1.14
COL16A1-207ENST00000466829 EIF4G2P78344 907 aaKnown RBP eCLIP22.16■■□□□ 1.14
COL16A1-207ENST00000466829 ANKRD24Q8TF21 1146 aa22.16■■□□□ 1.14
COL16A1-207ENST00000466829 LTV1Q96GA3 475 aaPredicted RBP22.16■■□□□ 1.14
COL16A1-207ENST00000466829 OVOS2A0A0J9YW53 1432 aa22.15■■□□□ 1.14
COL16A1-207ENST00000466829 OVOS2Q6IE36 1432 aa22.15■■□□□ 1.14
COL16A1-207ENST00000466829 AMPHP49418 695 aa22.15■■□□□ 1.14
COL16A1-207ENST00000466829 GGNBP2Q9H3C7 697 aa22.15■■□□□ 1.14
COL16A1-207ENST00000466829 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
COL16A1-207ENST00000466829 ERBB3P21860 1342 aa22.14■■□□□ 1.14
COL16A1-207ENST00000466829 EXOC5O00471 708 aa22.14■■□□□ 1.13
COL16A1-207ENST00000466829 EZH2Q15910 746 aaKnown RBP22.13■■□□□ 1.13
COL16A1-207ENST00000466829 IP6K1Q92551 441 aa22.13■■□□□ 1.13
COL16A1-207ENST00000466829 FYB1O15117 783 aa22.12■■□□□ 1.13
COL16A1-207ENST00000466829 FBLN1P23142 703 aa22.12■■□□□ 1.13
COL16A1-207ENST00000466829 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
COL16A1-207ENST00000466829 ABCC6O95255 1503 aa22.11■■□□□ 1.13
COL16A1-207ENST00000466829 OVOS2A0A0G2JMS6 1433 aa22.11■■□□□ 1.13
COL16A1-207ENST00000466829 MAP3K19Q56UN5 1328 aa22.1■■□□□ 1.13
COL16A1-207ENST00000466829 PSDA5PKW4 1024 aaPredicted RBP22.1■■□□□ 1.13
COL16A1-207ENST00000466829 HSPA5P11021 654 aaKnown RBP22.1■■□□□ 1.13
COL16A1-207ENST00000466829 RGPD5Q99666 1765 aa22.1■■□□□ 1.13
COL16A1-207ENST00000466829 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
COL16A1-207ENST00000466829 USP54Q70EL1 1684 aa22.09■■□□□ 1.13
COL16A1-207ENST00000466829 PARP4Q9UKK3 1724 aaKnown RBP22.09■■□□□ 1.13
COL16A1-207ENST00000466829 IL2RBP14784 551 aa22.08■■□□□ 1.13
COL16A1-207ENST00000466829 RRS1Q15050 365 aaKnown RBP22.08■■□□□ 1.13
COL16A1-207ENST00000466829 CAMKK2Q96RR4 588 aa22.08■■□□□ 1.13
COL16A1-207ENST00000466829 DISP2A7MBM2 1401 aa22.07■■□□□ 1.12
COL16A1-207ENST00000466829 HOXC9P31274 260 aa22.07■■□□□ 1.12
COL16A1-207ENST00000466829 CARD14Q9BXL6 1004 aa22.07■■□□□ 1.12
COL16A1-207ENST00000466829 NSD3Q9BZ95 1437 aa22.06■■□□□ 1.12
COL16A1-207ENST00000466829 LTN1O94822 1766 aa22.05■■□□□ 1.12
COL16A1-207ENST00000466829 R3HDM1Q15032 1099 aaKnown RBP22.04■■□□□ 1.12
COL16A1-207ENST00000466829 LRRC37A3O60309 1634 aa22.04■■□□□ 1.12
COL16A1-207ENST00000466829 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
COL16A1-207ENST00000466829 BCL11BQ9C0K0 894 aaPredicted RBP22.03■■□□□ 1.12
COL16A1-207ENST00000466829 NBPF14Q5TI25 921 aa22.02■■□□□ 1.12
COL16A1-207ENST00000466829 TNS1Q9HBL0 1735 aaKnown RBP22.02■■□□□ 1.12
COL16A1-207ENST00000466829 CGNL1Q0VF96 1302 aa22.02■■□□□ 1.12
COL16A1-207ENST00000466829 TNS2Q63HR2 1409 aa22■■□□□ 1.11
COL16A1-207ENST00000466829 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
COL16A1-207ENST00000466829 PTF1AQ7RTS3 328 aa21.99■■□□□ 1.11
COL16A1-207ENST00000466829 DDX54Q8TDD1 881 aaKnown RBP21.99■■□□□ 1.11
COL16A1-207ENST00000466829 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
COL16A1-207ENST00000466829 SMG6Q86US8 1419 aaKnown RBP21.98■■□□□ 1.11
COL16A1-207ENST00000466829 ACSBG1Q96GR2 724 aa21.98■■□□□ 1.11
COL16A1-207ENST00000466829 SRCAPQ6ZRS2 3230 aa21.98■■□□□ 1.11
COL16A1-207ENST00000466829 WNK3Q9BYP7 1800 aa21.96■■□□□ 1.11
COL16A1-207ENST00000466829 PLSCR1O15162 318 aa21.96■■□□□ 1.11
COL16A1-207ENST00000466829 HSP90AB2PQ58FF8 381 aa21.96■■□□□ 1.11
COL16A1-207ENST00000466829 PANK3Q9H999 370 aa21.96■■□□□ 1.11
COL16A1-207ENST00000466829 USHBP1Q8N6Y0 703 aa21.95■■□□□ 1.1
COL16A1-207ENST00000466829 BCL9O00512 1426 aa21.95■■□□□ 1.1
COL16A1-207ENST00000466829 PEAK1Q9H792 1746 aa21.94■■□□□ 1.1
COL16A1-207ENST00000466829 KCNQ2O43526 872 aa21.94■■□□□ 1.1
COL16A1-207ENST00000466829 TNNT2P45379 298 aaPredicted RBP21.94■■□□□ 1.1
COL16A1-207ENST00000466829 NBPF6Q5VWK0 638 aa21.94■■□□□ 1.1
COL16A1-207ENST00000466829 NBPF4Q96M43 638 aa21.94■■□□□ 1.1
COL16A1-207ENST00000466829 EMILIN1Q9Y6C2 1016 aa21.94■■□□□ 1.1
COL16A1-207ENST00000466829 MYOM1P52179 1685 aa21.94■■□□□ 1.1
COL16A1-207ENST00000466829 FLT4P35916 1363 aa21.93■■□□□ 1.1
COL16A1-207ENST00000466829 RAPGEF4Q8WZA2 1011 aa21.93■■□□□ 1.1
COL16A1-207ENST00000466829 KIF20BQ96Q89 1820 aa21.92■■□□□ 1.1
COL16A1-207ENST00000466829 INSRP06213 1382 aa21.92■■□□□ 1.1
COL16A1-207ENST00000466829 ZCRB1Q8TBF4 217 aaKnown RBP21.92■■□□□ 1.1
COL16A1-207ENST00000466829 KIF24Q5T7B8 1368 aa21.9■■□□□ 1.1
COL16A1-207ENST00000466829 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.09
COL16A1-207ENST00000466829 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
COL16A1-207ENST00000466829 SYTL4Q96C24 671 aaPredicted RBP21.89■■□□□ 1.09
COL16A1-207ENST00000466829 TXNRD1Q16881 649 aa21.88■■□□□ 1.09
COL16A1-207ENST00000466829 FAM208AQ9UK61 1670 aaKnown RBP21.88■■□□□ 1.09
COL16A1-207ENST00000466829 KNSTRNQ9Y448 316 aa21.87■■□□□ 1.09
COL16A1-207ENST00000466829 SBF2Q86WG5 1849 aa21.86■■□□□ 1.09
COL16A1-207ENST00000466829 PROM2Q8N271 834 aa21.86■■□□□ 1.09
COL16A1-207ENST00000466829 POLKQ9UBT6 870 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms