RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 DDIT3P35638 169 aa18.93■□□□□ 0.62
GAPDH-206ENST00000466525 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
GAPDH-206ENST00000466525 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
GAPDH-206ENST00000466525 PTMSP20962 102 aa18.92■□□□□ 0.62
GAPDH-206ENST00000466525 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
GAPDH-206ENST00000466525 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
GAPDH-206ENST00000466525 CADPS2Q86UW7 1296 aa18.92■□□□□ 0.62
GAPDH-206ENST00000466525 UPF1Q92900 1129 aaKnown RBP eCLIP18.92■□□□□ 0.62
GAPDH-206ENST00000466525 TBX22Q9Y458 520 aa18.92■□□□□ 0.62
GAPDH-206ENST00000466525 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
GAPDH-206ENST00000466525 TRIM27P14373 513 aa18.91■□□□□ 0.62
GAPDH-206ENST00000466525 TMPOP42166 694 aaKnown RBP18.91■□□□□ 0.62
GAPDH-206ENST00000466525 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.91■□□□□ 0.62
GAPDH-206ENST00000466525 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.91■□□□□ 0.62
GAPDH-206ENST00000466525 PNPLA6Q8IY17 1366 aa18.91■□□□□ 0.62
GAPDH-206ENST00000466525 VGFO15240 615 aaPredicted RBP18.91■□□□□ 0.62
GAPDH-206ENST00000466525 ZNF692Q9BU19 519 aaPredicted RBP18.91■□□□□ 0.62
GAPDH-206ENST00000466525 BCL2L13Q9BXK5 485 aa18.91■□□□□ 0.62
GAPDH-206ENST00000466525 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
GAPDH-206ENST00000466525 MRE11P49959 708 aa18.9■□□□□ 0.62
GAPDH-206ENST00000466525 HSCBQ8IWL3 235 aa18.9■□□□□ 0.62
GAPDH-206ENST00000466525 CHMP4BQ9H444 224 aaKnown RBP18.9■□□□□ 0.62
GAPDH-206ENST00000466525 ZBTB40Q9NUA8 1239 aa18.9■□□□□ 0.62
GAPDH-206ENST00000466525 TRIM35Q9UPQ4 493 aa18.9■□□□□ 0.62
GAPDH-206ENST00000466525 ATAD2Q6PL18 1390 aa18.9■□□□□ 0.62
GAPDH-206ENST00000466525 XRCC6P12956 609 aaKnown RBP eCLIP18.89■□□□□ 0.61
GAPDH-206ENST00000466525 UBE2Q2Q8WVN8 375 aa18.89■□□□□ 0.61
GAPDH-206ENST00000466525 C19orf44Q9H6X5 657 aa18.89■□□□□ 0.61
GAPDH-206ENST00000466525 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.61
GAPDH-206ENST00000466525 RXRBP28702 533 aa18.88■□□□□ 0.61
GAPDH-206ENST00000466525 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
GAPDH-206ENST00000466525 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
GAPDH-206ENST00000466525 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
GAPDH-206ENST00000466525 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
GAPDH-206ENST00000466525 TRAK2O60296 914 aa18.88■□□□□ 0.61
GAPDH-206ENST00000466525 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
GAPDH-206ENST00000466525 ATF3P18847 181 aa18.88■□□□□ 0.61
GAPDH-206ENST00000466525 NUCB1Q02818 461 aa18.88■□□□□ 0.61
GAPDH-206ENST00000466525 PIK3R4Q99570 1358 aa18.88■□□□□ 0.61
GAPDH-206ENST00000466525 CLCN1P35523 988 aa18.87■□□□□ 0.61
GAPDH-206ENST00000466525 RRAGDQ9NQL2 400 aaPredicted RBP18.87■□□□□ 0.61
GAPDH-206ENST00000466525 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
GAPDH-206ENST00000466525 COL16A1Q07092 1604 aaPredicted RBP18.86■□□□□ 0.61
GAPDH-206ENST00000466525 CDK12Q9NYV4 1490 aaPredicted RBP18.85■□□□□ 0.61
GAPDH-206ENST00000466525 SETD1AO15047 1707 aaKnown RBP18.85■□□□□ 0.61
GAPDH-206ENST00000466525 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
GAPDH-206ENST00000466525 MFAP1P55081 439 aaKnown RBP18.85■□□□□ 0.61
GAPDH-206ENST00000466525 BMP2KLQ5H9B9 411 aa18.85■□□□□ 0.61
GAPDH-206ENST00000466525 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
GAPDH-206ENST00000466525 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
GAPDH-206ENST00000466525 ITPRIPQ8IWB1 547 aa18.84■□□□□ 0.61
GAPDH-206ENST00000466525 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
GAPDH-206ENST00000466525 ARHGAP45Q92619 1136 aa18.83■□□□□ 0.61
GAPDH-206ENST00000466525 AHDC1Q5TGY3 1603 aaPredicted RBP18.83■□□□□ 0.6
GAPDH-206ENST00000466525 PTCH1Q13635 1447 aa18.83■□□□□ 0.6
GAPDH-206ENST00000466525 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
GAPDH-206ENST00000466525 SKOR2Q2VWA4 1001 aaPredicted RBP18.83■□□□□ 0.6
GAPDH-206ENST00000466525 TSR2Q969E8 191 aaKnown RBP18.83■□□□□ 0.6
GAPDH-206ENST00000466525 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
GAPDH-206ENST00000466525 TMEM57Q8N5G2 664 aa18.82■□□□□ 0.6
GAPDH-206ENST00000466525 GCC1Q96CN9 775 aa18.82■□□□□ 0.6
GAPDH-206ENST00000466525 TERF2IPQ9NYB0 399 aa18.82■□□□□ 0.6
GAPDH-206ENST00000466525 LRP6O75581 1613 aa18.81■□□□□ 0.6
GAPDH-206ENST00000466525 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
GAPDH-206ENST00000466525 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
GAPDH-206ENST00000466525 FCHSD2O94868 740 aa18.8■□□□□ 0.6
GAPDH-206ENST00000466525 CLEC17AQ6ZS10 378 aa18.8■□□□□ 0.6
GAPDH-206ENST00000466525 CHD1LQ86WJ1 897 aa18.8■□□□□ 0.6
GAPDH-206ENST00000466525 GBP4Q96PP9 640 aa18.8■□□□□ 0.6
GAPDH-206ENST00000466525 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
GAPDH-206ENST00000466525 KIF24Q5T7B8 1368 aa18.79■□□□□ 0.6
GAPDH-206ENST00000466525 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
GAPDH-206ENST00000466525 GRPEL1Q9HAV7 217 aa18.78■□□□□ 0.6
GAPDH-206ENST00000466525 DCCP43146 1447 aa18.78■□□□□ 0.6
GAPDH-206ENST00000466525 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
GAPDH-206ENST00000466525 RIPK4P57078 832 aa18.77■□□□□ 0.6
GAPDH-206ENST00000466525 CALD1Q05682 793 aaKnown RBP18.77■□□□□ 0.6
GAPDH-206ENST00000466525 IBTKQ9P2D0 1353 aaPredicted RBP18.77■□□□□ 0.6
GAPDH-206ENST00000466525 FYB1O15117 783 aa18.77■□□□□ 0.59
GAPDH-206ENST00000466525 CABP2Q9NPB3 220 aa18.77■□□□□ 0.59
GAPDH-206ENST00000466525 BRINP3Q76B58 766 aa18.76■□□□□ 0.59
GAPDH-206ENST00000466525 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
GAPDH-206ENST00000466525 MYO5BQ9ULV0 1848 aa18.75■□□□□ 0.59
GAPDH-206ENST00000466525 U2SURPO15042 1029 aaKnown RBP18.75■□□□□ 0.59
GAPDH-206ENST00000466525 DLC1Q96QB1 1528 aa18.75■□□□□ 0.59
GAPDH-206ENST00000466525 ATP7BP35670 1465 aa18.75■□□□□ 0.59
GAPDH-206ENST00000466525 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
GAPDH-206ENST00000466525 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
GAPDH-206ENST00000466525 AMOTL2Q9Y2J4 779 aa18.74■□□□□ 0.59
GAPDH-206ENST00000466525 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-206ENST00000466525 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-206ENST00000466525 ZBTB7BO15156 539 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-206ENST00000466525 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
GAPDH-206ENST00000466525 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-206ENST00000466525 TNPO1Q92973 898 aaKnown RBP18.73■□□□□ 0.59
GAPDH-206ENST00000466525 KIF2CQ99661 725 aa18.73■□□□□ 0.59
GAPDH-206ENST00000466525 AFF2P51816 1311 aa18.73■□□□□ 0.59
GAPDH-206ENST00000466525 YTHDC2Q9H6S0 1430 aaKnown RBP18.72■□□□□ 0.59
GAPDH-206ENST00000466525 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
GAPDH-206ENST00000466525 PANK2Q9BZ23 570 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms