RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 GGNBP2Q9H3C7 697 aa14.17□□□□□ -0.14
CD40-204ENST00000466205 AATKQ6ZMQ8 1374 aa14.17□□□□□ -0.14
CD40-204ENST00000466205 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
CD40-204ENST00000466205 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
CD40-204ENST00000466205 ONECUT3O60422 494 aaPredicted RBP14.16□□□□□ -0.14
CD40-204ENST00000466205 TOM1L2Q6ZVM7 507 aa14.16□□□□□ -0.14
CD40-204ENST00000466205 COL18A1P39060 1754 aa14.16□□□□□ -0.14
CD40-204ENST00000466205 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
CD40-204ENST00000466205 COG3Q96JB2 828 aa14.15□□□□□ -0.14
CD40-204ENST00000466205 USP54Q70EL1 1684 aa14.14□□□□□ -0.15
CD40-204ENST00000466205 THSD7AQ9UPZ6 1657 aa14.14□□□□□ -0.15
CD40-204ENST00000466205 TCP11L2Q8N4U5 519 aa14.14□□□□□ -0.15
CD40-204ENST00000466205 CRB1P82279 1406 aa14.14□□□□□ -0.15
CD40-204ENST00000466205 NSD3Q9BZ95 1437 aa14.14□□□□□ -0.15
CD40-204ENST00000466205 LTN1O94822 1766 aa14.14□□□□□ -0.15
CD40-204ENST00000466205 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
CD40-204ENST00000466205 CARD14Q9BXL6 1004 aa14.13□□□□□ -0.15
CD40-204ENST00000466205 FYB1O15117 783 aa14.12□□□□□ -0.15
CD40-204ENST00000466205 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
CD40-204ENST00000466205 WDR17Q8IZU2 1322 aa14.12□□□□□ -0.15
CD40-204ENST00000466205 RRS1Q15050 365 aaKnown RBP14.11□□□□□ -0.15
CD40-204ENST00000466205 KIF20BQ96Q89 1820 aa14.11□□□□□ -0.15
CD40-204ENST00000466205 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
CD40-204ENST00000466205 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
CD40-204ENST00000466205 DEFB132Q7Z7B7 95 aa14.09□□□□□ -0.15
CD40-204ENST00000466205 ANKRD24Q8TF21 1146 aa14.09□□□□□ -0.15
CD40-204ENST00000466205 MAP3K19Q56UN5 1328 aa14.09□□□□□ -0.15
CD40-204ENST00000466205 AMPHP49418 695 aa14.08□□□□□ -0.16
CD40-204ENST00000466205 NLRP2Q9NX02 1062 aa14.08□□□□□ -0.16
CD40-204ENST00000466205 THRAP3Q9Y2W1 955 aaKnown RBP14.08□□□□□ -0.16
CD40-204ENST00000466205 BLMP54132 1417 aaPredicted RBP14.07□□□□□ -0.16
CD40-204ENST00000466205 SF3B2Q13435 895 aaKnown RBP14.07□□□□□ -0.16
CD40-204ENST00000466205 PANK3Q9H999 370 aa14.07□□□□□ -0.16
CD40-204ENST00000466205 ERBB3P21860 1342 aa14.07□□□□□ -0.16
CD40-204ENST00000466205 LRRC37A3O60309 1634 aa14.06□□□□□ -0.16
CD40-204ENST00000466205 HOXC9P31274 260 aa14.06□□□□□ -0.16
CD40-204ENST00000466205 IP6K1Q92551 441 aa14.06□□□□□ -0.16
CD40-204ENST00000466205 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
CD40-204ENST00000466205 WNK3Q9BYP7 1800 aa14.06□□□□□ -0.16
CD40-204ENST00000466205 ABCC6O95255 1503 aa14.05□□□□□ -0.16
CD40-204ENST00000466205 PARP4Q9UKK3 1724 aaKnown RBP14.05□□□□□ -0.16
CD40-204ENST00000466205 TNNT2P45379 298 aaPredicted RBP14.05□□□□□ -0.16
CD40-204ENST00000466205 KIF7Q2M1P5 1343 aa14.05□□□□□ -0.16
CD40-204ENST00000466205 EP400Q96L91 3159 aa14.05□□□□□ -0.16
CD40-204ENST00000466205 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
CD40-204ENST00000466205 TRIM37O94972 964 aa14.04□□□□□ -0.16
CD40-204ENST00000466205 DDB1Q16531 1140 aa14.04□□□□□ -0.16
CD40-204ENST00000466205 CCDC125Q86Z20 511 aa14.04□□□□□ -0.16
CD40-204ENST00000466205 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
CD40-204ENST00000466205 CGNL1Q0VF96 1302 aa14.03□□□□□ -0.16
CD40-204ENST00000466205 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
CD40-204ENST00000466205 PEAK1Q9H792 1746 aa14.02□□□□□ -0.16
CD40-204ENST00000466205 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
CD40-204ENST00000466205 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
CD40-204ENST00000466205 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.17
CD40-204ENST00000466205 USHBP1Q8N6Y0 703 aa14.02□□□□□ -0.17
CD40-204ENST00000466205 RGPD1P0DJD0 1748 aa14.01□□□□□ -0.17
CD40-204ENST00000466205 DISP2A7MBM2 1401 aa14.01□□□□□ -0.17
CD40-204ENST00000466205 HSP90AB2PQ58FF8 381 aa14.01□□□□□ -0.17
CD40-204ENST00000466205 EXOC5O00471 708 aa14□□□□□ -0.17
CD40-204ENST00000466205 BAG6P46379 1132 aa14□□□□□ -0.17
CD40-204ENST00000466205 MARCH10Q8NA82 808 aaPredicted RBP14□□□□□ -0.17
CD40-204ENST00000466205 RGPD2P0DJD1 1756 aa14□□□□□ -0.17
CD40-204ENST00000466205 TNS1Q9HBL0 1735 aaKnown RBP14□□□□□ -0.17
CD40-204ENST00000466205 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
CD40-204ENST00000466205 APBA3O96018 575 aa13.99□□□□□ -0.17
CD40-204ENST00000466205 IL2RBP14784 551 aa13.99□□□□□ -0.17
CD40-204ENST00000466205 CDCA7Q9BWT1 371 aaPredicted RBP13.99□□□□□ -0.17
CD40-204ENST00000466205 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
CD40-204ENST00000466205 FLT4P35916 1363 aa13.98□□□□□ -0.17
CD40-204ENST00000466205 EZH2Q15910 746 aaKnown RBP13.98□□□□□ -0.17
CD40-204ENST00000466205 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
CD40-204ENST00000466205 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
CD40-204ENST00000466205 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
CD40-204ENST00000466205 NBPF6Q5VWK0 638 aa13.97□□□□□ -0.17
CD40-204ENST00000466205 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
CD40-204ENST00000466205 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
CD40-204ENST00000466205 KNSTRNQ9Y448 316 aa13.97□□□□□ -0.17
CD40-204ENST00000466205 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
CD40-204ENST00000466205 FAM208AQ9UK61 1670 aaKnown RBP13.97□□□□□ -0.17
CD40-204ENST00000466205 ACSBG1Q96GR2 724 aa13.96□□□□□ -0.17
CD40-204ENST00000466205 INSRP06213 1382 aa13.96□□□□□ -0.18
CD40-204ENST00000466205 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
CD40-204ENST00000466205 DDX54Q8TDD1 881 aaKnown RBP13.95□□□□□ -0.18
CD40-204ENST00000466205 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
CD40-204ENST00000466205 MEGF6O75095 1541 aa13.95□□□□□ -0.18
CD40-204ENST00000466205 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
CD40-204ENST00000466205 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
CD40-204ENST00000466205 PSDA5PKW4 1024 aaPredicted RBP13.93□□□□□ -0.18
CD40-204ENST00000466205 KCNQ2O43526 872 aa13.93□□□□□ -0.18
CD40-204ENST00000466205 NSD2O96028 1365 aa13.92□□□□□ -0.18
CD40-204ENST00000466205 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
CD40-204ENST00000466205 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
CD40-204ENST00000466205 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
CD40-204ENST00000466205 CAMKK2Q96RR4 588 aa13.91□□□□□ -0.18
CD40-204ENST00000466205 SBF2Q86WG5 1849 aa13.91□□□□□ -0.18
CD40-204ENST00000466205 EIF4A2Q14240 407 aaKnown RBP13.9□□□□□ -0.18
CD40-204ENST00000466205 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
CD40-204ENST00000466205 TATP17735 454 aaPredicted RBP13.89□□□□□ -0.19
CD40-204ENST00000466205 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms