RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 TXNRD1Q16881 649 aa12.29□□□□□ -0.44
DDR1-242ENST00000465966 PROM2Q8N271 834 aa12.29□□□□□ -0.44
DDR1-242ENST00000465966 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
DDR1-242ENST00000465966 KCNH5Q8NCM2 988 aa12.29□□□□□ -0.44
DDR1-242ENST00000465966 BCL9O00512 1426 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
DDR1-242ENST00000465966 PTGER2P43116 358 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 SLC15A2Q16348 729 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 NBPF1Q3BBV0 1214 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 PTF1AQ7RTS3 328 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 SYT17Q9BSW7 474 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 PDGFDQ9GZP0 370 aaPredicted RBP12.28□□□□□ -0.44
DDR1-242ENST00000465966 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 USP6P35125 1406 aa12.28□□□□□ -0.44
DDR1-242ENST00000465966 CARD10Q9BWT7 1032 aa12.27□□□□□ -0.45
DDR1-242ENST00000465966 FHDC1Q9C0D6 1143 aaPredicted RBP12.27□□□□□ -0.45
DDR1-242ENST00000465966 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.45
DDR1-242ENST00000465966 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
DDR1-242ENST00000465966 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
DDR1-242ENST00000465966 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
DDR1-242ENST00000465966 ARHGEF25Q86VW2 580 aa12.25□□□□□ -0.45
DDR1-242ENST00000465966 EVC2Q86UK5 1308 aa12.25□□□□□ -0.45
DDR1-242ENST00000465966 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
DDR1-242ENST00000465966 SOX12O15370 315 aa12.24□□□□□ -0.45
DDR1-242ENST00000465966 CPSF1Q10570 1443 aaKnown RBP12.24□□□□□ -0.45
DDR1-242ENST00000465966 ARXQ96QS3 562 aa12.24□□□□□ -0.45
DDR1-242ENST00000465966 RGPD3A6NKT7 1758 aaPredicted RBP12.23□□□□□ -0.45
DDR1-242ENST00000465966 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
DDR1-242ENST00000465966 PEAK1Q9H792 1746 aa12.23□□□□□ -0.45
DDR1-242ENST00000465966 SLIT3O75094 1523 aa12.23□□□□□ -0.45
DDR1-242ENST00000465966 CCDC7Q96M83 1385 aa12.23□□□□□ -0.45
DDR1-242ENST00000465966 LRRC37A3O60309 1634 aa12.22□□□□□ -0.45
DDR1-242ENST00000465966 TTC21BQ7Z4L5 1316 aa12.22□□□□□ -0.45
DDR1-242ENST00000465966 TTC21AQ8NDW8 1320 aa12.22□□□□□ -0.45
DDR1-242ENST00000465966 C1QTNF8P60827 252 aa12.22□□□□□ -0.45
DDR1-242ENST00000465966 GPR162Q16538 588 aa12.21□□□□□ -0.45
DDR1-242ENST00000465966 ACSBG1Q96GR2 724 aa12.21□□□□□ -0.45
DDR1-242ENST00000465966 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
DDR1-242ENST00000465966 CASZ1Q86V15 1759 aa12.2□□□□□ -0.46
DDR1-242ENST00000465966 SIN3AQ96ST3 1273 aa12.2□□□□□ -0.46
DDR1-242ENST00000465966 POLD1P28340 1107 aa12.19□□□□□ -0.46
DDR1-242ENST00000465966 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
DDR1-242ENST00000465966 KIAA1210Q9ULL0 1709 aa12.19□□□□□ -0.46
DDR1-242ENST00000465966 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
DDR1-242ENST00000465966 IL2RBP14784 551 aa12.18□□□□□ -0.46
DDR1-242ENST00000465966 TNS2Q63HR2 1409 aa12.18□□□□□ -0.46
DDR1-242ENST00000465966 MYOM1P52179 1685 aa12.17□□□□□ -0.46
DDR1-242ENST00000465966 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
DDR1-242ENST00000465966 SLC16A10Q8TF71 515 aa12.17□□□□□ -0.46
DDR1-242ENST00000465966 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
DDR1-242ENST00000465966 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
DDR1-242ENST00000465966 ERBB3P21860 1342 aa12.15□□□□□ -0.46
DDR1-242ENST00000465966 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
DDR1-242ENST00000465966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDR1-242ENST00000465966 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
DDR1-242ENST00000465966 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
DDR1-242ENST00000465966 PIK3C2AO00443 1686 aa12.14□□□□□ -0.47
DDR1-242ENST00000465966 NEUROD1Q13562 356 aa12.14□□□□□ -0.47
DDR1-242ENST00000465966 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
DDR1-242ENST00000465966 L3MBTL2Q969R5 705 aa12.14□□□□□ -0.47
DDR1-242ENST00000465966 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
DDR1-242ENST00000465966 COL18A1P39060 1754 aa12.14□□□□□ -0.47
DDR1-242ENST00000465966 ABCC6O95255 1503 aa12.13□□□□□ -0.47
DDR1-242ENST00000465966 ANKRD24Q8TF21 1146 aa12.13□□□□□ -0.47
DDR1-242ENST00000465966 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
DDR1-242ENST00000465966 LRRC4BQ9NT99 713 aa12.13□□□□□ -0.47
DDR1-242ENST00000465966 ROCK2O75116 1388 aaKnown RBP12.13□□□□□ -0.47
DDR1-242ENST00000465966 TONSLQ96HA7 1378 aa12.13□□□□□ -0.47
DDR1-242ENST00000465966 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
DDR1-242ENST00000465966 DDX54Q8TDD1 881 aaKnown RBP12.12□□□□□ -0.47
DDR1-242ENST00000465966 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
DDR1-242ENST00000465966 NFAT5O94916 1531 aa12.11□□□□□ -0.47
DDR1-242ENST00000465966 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
DDR1-242ENST00000465966 AKAP12Q02952 1782 aa12.11□□□□□ -0.47
DDR1-242ENST00000465966 GRIN3BO60391 1043 aa12.11□□□□□ -0.47
DDR1-242ENST00000465966 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
DDR1-242ENST00000465966 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
DDR1-242ENST00000465966 SYTL4Q96C24 671 aaPredicted RBP12.11□□□□□ -0.47
DDR1-242ENST00000465966 NME9Q86XW9 330 aa12.1□□□□□ -0.47
DDR1-242ENST00000465966 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
DDR1-242ENST00000465966 MSH5O43196 834 aa12.09□□□□□ -0.47
DDR1-242ENST00000465966 TIMELESSQ9UNS1 1208 aa12.09□□□□□ -0.47
DDR1-242ENST00000465966 NHSQ6T4R5 1651 aa12.09□□□□□ -0.47
DDR1-242ENST00000465966 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
DDR1-242ENST00000465966 PNPLA7Q6ZV29 1317 aa12.09□□□□□ -0.47
DDR1-242ENST00000465966 HMGB2P26583 209 aaKnown RBP12.08□□□□□ -0.48
DDR1-242ENST00000465966 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
DDR1-242ENST00000465966 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
DDR1-242ENST00000465966 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
DDR1-242ENST00000465966 IP6K1Q92551 441 aa12.07□□□□□ -0.48
DDR1-242ENST00000465966 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
DDR1-242ENST00000465966 PAPPAQ13219 1627 aa12.07□□□□□ -0.48
DDR1-242ENST00000465966 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
DDR1-242ENST00000465966 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
DDR1-242ENST00000465966 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
DDR1-242ENST00000465966 KCNQ4P56696 695 aa12.05□□□□□ -0.48
DDR1-242ENST00000465966 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
DDR1-242ENST00000465966 UTRNP46939 3433 aa12.05□□□□□ -0.48
DDR1-242ENST00000465966 EDC4Q6P2E9 1401 aaKnown RBP12.04□□□□□ -0.48
DDR1-242ENST00000465966 AMPHP49418 695 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms