RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 CRB1P82279 1406 aa16.86■□□□□ 0.29
TMCO3-205ENST00000465556 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
TMCO3-205ENST00000465556 NME9Q86XW9 330 aa16.85■□□□□ 0.29
TMCO3-205ENST00000465556 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
TMCO3-205ENST00000465556 BLMP54132 1417 aaPredicted RBP16.85■□□□□ 0.29
TMCO3-205ENST00000465556 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
TMCO3-205ENST00000465556 SOX12O15370 315 aa16.84■□□□□ 0.29
TMCO3-205ENST00000465556 EVA1CP58658 441 aa16.84■□□□□ 0.29
TMCO3-205ENST00000465556 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
TMCO3-205ENST00000465556 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
TMCO3-205ENST00000465556 ARHGEF25Q86VW2 580 aa16.83■□□□□ 0.28
TMCO3-205ENST00000465556 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
TMCO3-205ENST00000465556 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
TMCO3-205ENST00000465556 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
TMCO3-205ENST00000465556 SBF2Q86WG5 1849 aa16.81■□□□□ 0.28
TMCO3-205ENST00000465556 PEAK1Q9H792 1746 aa16.8■□□□□ 0.28
TMCO3-205ENST00000465556 ANKRD26Q9UPS8 1709 aa16.8■□□□□ 0.28
TMCO3-205ENST00000465556 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
TMCO3-205ENST00000465556 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
TMCO3-205ENST00000465556 WDR17Q8IZU2 1322 aa16.79■□□□□ 0.28
TMCO3-205ENST00000465556 AXIN2Q9Y2T1 843 aa16.79■□□□□ 0.28
TMCO3-205ENST00000465556 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
TMCO3-205ENST00000465556 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
TMCO3-205ENST00000465556 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.272e-9■■■■■ 65.9
TMCO3-205ENST00000465556 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
TMCO3-205ENST00000465556 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
TMCO3-205ENST00000465556 DISP2A7MBM2 1401 aa16.75■□□□□ 0.27
TMCO3-205ENST00000465556 ERBB3P21860 1342 aa16.74■□□□□ 0.27
TMCO3-205ENST00000465556 NSD3Q9BZ95 1437 aa16.74■□□□□ 0.27
TMCO3-205ENST00000465556 COG3Q96JB2 828 aa16.74■□□□□ 0.27
TMCO3-205ENST00000465556 RREB1Q92766 1687 aa16.74■□□□□ 0.27
TMCO3-205ENST00000465556 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
TMCO3-205ENST00000465556 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
TMCO3-205ENST00000465556 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
TMCO3-205ENST00000465556 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
TMCO3-205ENST00000465556 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
TMCO3-205ENST00000465556 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
TMCO3-205ENST00000465556 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
TMCO3-205ENST00000465556 MAP2P11137 1827 aaKnown RBP16.72■□□□□ 0.27
TMCO3-205ENST00000465556 OVOS2A0A0G2JMS6 1433 aa16.71■□□□□ 0.27
TMCO3-205ENST00000465556 TNS2Q63HR2 1409 aa16.71■□□□□ 0.27
TMCO3-205ENST00000465556 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
TMCO3-205ENST00000465556 DEFB132Q7Z7B7 95 aa16.71■□□□□ 0.27
TMCO3-205ENST00000465556 RTL1A6NKG5 1358 aa16.7■□□□□ 0.26
TMCO3-205ENST00000465556 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
TMCO3-205ENST00000465556 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
TMCO3-205ENST00000465556 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
TMCO3-205ENST00000465556 FYB1O15117 783 aa16.69■□□□□ 0.26
TMCO3-205ENST00000465556 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
TMCO3-205ENST00000465556 SHANK3Q9BYB0 1731 aa16.69■□□□□ 0.26
TMCO3-205ENST00000465556 KAT6BQ8WYB5 2073 aa16.68■□□□□ 0.26
TMCO3-205ENST00000465556 BAG6P46379 1132 aa16.68■□□□□ 0.26
TMCO3-205ENST00000465556 ANKRD24Q8TF21 1146 aa16.68■□□□□ 0.26
TMCO3-205ENST00000465556 CDCA7Q9BWT1 371 aaPredicted RBP16.68■□□□□ 0.26
TMCO3-205ENST00000465556 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
TMCO3-205ENST00000465556 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
TMCO3-205ENST00000465556 DDB1Q16531 1140 aa16.67■□□□□ 0.26
TMCO3-205ENST00000465556 IP6K1Q92551 441 aa16.67■□□□□ 0.26
TMCO3-205ENST00000465556 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
TMCO3-205ENST00000465556 TRIM37O94972 964 aa16.65■□□□□ 0.26
TMCO3-205ENST00000465556 FBLN1P23142 703 aa16.65■□□□□ 0.26
TMCO3-205ENST00000465556 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
TMCO3-205ENST00000465556 HOXC9P31274 260 aa16.64■□□□□ 0.25
TMCO3-205ENST00000465556 RRS1Q15050 365 aaKnown RBP16.64■□□□□ 0.25
TMCO3-205ENST00000465556 CGNL1Q0VF96 1302 aa16.64■□□□□ 0.25
TMCO3-205ENST00000465556 BCL9O00512 1426 aa16.63■□□□□ 0.25
TMCO3-205ENST00000465556 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
TMCO3-205ENST00000465556 AMPHP49418 695 aa16.63■□□□□ 0.25
TMCO3-205ENST00000465556 BTAF1O14981 1849 aa16.63■□□□□ 0.25
TMCO3-205ENST00000465556 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
TMCO3-205ENST00000465556 SMG6Q86US8 1419 aaKnown RBP16.62■□□□□ 0.25
TMCO3-205ENST00000465556 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
TMCO3-205ENST00000465556 EN1Q05925 392 aaPredicted RBP16.62■□□□□ 0.25
TMCO3-205ENST00000465556 FLT4P35916 1363 aa16.62■□□□□ 0.25
TMCO3-205ENST00000465556 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
TMCO3-205ENST00000465556 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
TMCO3-205ENST00000465556 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
TMCO3-205ENST00000465556 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
TMCO3-205ENST00000465556 IL2RBP14784 551 aa16.6■□□□□ 0.25
TMCO3-205ENST00000465556 INSRP06213 1382 aa16.6■□□□□ 0.25
TMCO3-205ENST00000465556 MEGF6O75095 1541 aa16.6■□□□□ 0.25
TMCO3-205ENST00000465556 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
TMCO3-205ENST00000465556 LRP5O75197 1615 aa16.59■□□□□ 0.25
TMCO3-205ENST00000465556 EXOC5O00471 708 aa16.58■□□□□ 0.24
TMCO3-205ENST00000465556 APBA3O96018 575 aa16.58■□□□□ 0.24
TMCO3-205ENST00000465556 NSD2O96028 1365 aa16.58■□□□□ 0.24
TMCO3-205ENST00000465556 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
TMCO3-205ENST00000465556 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
TMCO3-205ENST00000465556 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
TMCO3-205ENST00000465556 PANK3Q9H999 370 aa16.57■□□□□ 0.24
TMCO3-205ENST00000465556 EMILIN1Q9Y6C2 1016 aa16.56■□□□□ 0.24
TMCO3-205ENST00000465556 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
TMCO3-205ENST00000465556 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
TMCO3-205ENST00000465556 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
TMCO3-205ENST00000465556 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
TMCO3-205ENST00000465556 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
TMCO3-205ENST00000465556 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
TMCO3-205ENST00000465556 TOGARAM1Q9Y4F4 1720 aa16.52■□□□□ 0.24
TMCO3-205ENST00000465556 ITGB4P16144 1822 aa16.52■□□□□ 0.23
TMCO3-205ENST00000465556 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms