RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 USP31Q70CQ4 1352 aa24.17■■□□□ 1.46
TOM1-213ENST00000465529 WNK3Q9BYP7 1800 aa24.17■■□□□ 1.46
TOM1-213ENST00000465529 LTN1O94822 1766 aa24.17■■□□□ 1.46
TOM1-213ENST00000465529 PUS7Q96PZ0 661 aaKnown RBP24.16■■□□□ 1.46
TOM1-213ENST00000465529 TERF2IPQ9NYB0 399 aa24.15■■□□□ 1.46
TOM1-213ENST00000465529 LRRC37A3O60309 1634 aa24.14■■□□□ 1.46
TOM1-213ENST00000465529 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
TOM1-213ENST00000465529 CLSPNQ9HAW4 1339 aa24.13■■□□□ 1.45
TOM1-213ENST00000465529 THRAP3Q9Y2W1 955 aaKnown RBP24.13■■□□□ 1.45
TOM1-213ENST00000465529 WDR17Q8IZU2 1322 aa24.12■■□□□ 1.45
TOM1-213ENST00000465529 OVOS2A0A0J9YW53 1432 aa24.11■■□□□ 1.45
TOM1-213ENST00000465529 OVOS2Q6IE36 1432 aa24.11■■□□□ 1.45
TOM1-213ENST00000465529 TRIM37O94972 964 aa24.11■■□□□ 1.45
TOM1-213ENST00000465529 PDE3BQ13370 1112 aa24.11■■□□□ 1.45
TOM1-213ENST00000465529 BAG6P46379 1132 aa24.1■■□□□ 1.45
TOM1-213ENST00000465529 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
TOM1-213ENST00000465529 NINLQ9Y2I6 1382 aa24.1■■□□□ 1.45
TOM1-213ENST00000465529 TMF1P82094 1093 aa24.09■■□□□ 1.45
TOM1-213ENST00000465529 FAM196AQ6ZSG2 479 aa24.09■■□□□ 1.45
TOM1-213ENST00000465529 TIMELESSQ9UNS1 1208 aa24.09■■□□□ 1.45
TOM1-213ENST00000465529 CSB-PGBD3P0DP91 1061 aa24.08■■□□□ 1.45
TOM1-213ENST00000465529 ABCC6O95255 1503 aa24.08■■□□□ 1.45
TOM1-213ENST00000465529 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
TOM1-213ENST00000465529 CCER1Q8TC90 406 aaPredicted RBP24.07■■□□□ 1.44
TOM1-213ENST00000465529 MYOM1P52179 1685 aa24.07■■□□□ 1.44
TOM1-213ENST00000465529 ANKRD36BQ8N2N9 1353 aa24.06■■□□□ 1.44
TOM1-213ENST00000465529 DISP2A7MBM2 1401 aa24.04■■□□□ 1.44
TOM1-213ENST00000465529 SLC24A1O60721 1099 aa24.04■■□□□ 1.44
TOM1-213ENST00000465529 FBLN1P23142 703 aa24.04■■□□□ 1.44
TOM1-213ENST00000465529 CARD10Q9BWT7 1032 aa24.04■■□□□ 1.44
TOM1-213ENST00000465529 SBF2Q86WG5 1849 aa24.03■■□□□ 1.44
TOM1-213ENST00000465529 EZH2Q15910 746 aaKnown RBP24.03■■□□□ 1.44
TOM1-213ENST00000465529 DDB1Q16531 1140 aa24.02■■□□□ 1.44
TOM1-213ENST00000465529 ERBB3P21860 1342 aa24.02■■□□□ 1.44
TOM1-213ENST00000465529 PSDA5PKW4 1024 aaPredicted RBP24■■□□□ 1.43
TOM1-213ENST00000465529 APBA3O96018 575 aa24■■□□□ 1.43
TOM1-213ENST00000465529 KIF20BQ96Q89 1820 aa24■■□□□ 1.43
TOM1-213ENST00000465529 SRCAPQ6ZRS2 3230 aa24■■□□□ 1.43
TOM1-213ENST00000465529 OVOS2A0A0G2JMS6 1433 aa24■■□□□ 1.43
TOM1-213ENST00000465529 COG3Q96JB2 828 aa23.99■■□□□ 1.43
TOM1-213ENST00000465529 MARCH10Q8NA82 808 aaPredicted RBP23.98■■□□□ 1.43
TOM1-213ENST00000465529 ANKRD24Q8TF21 1146 aa23.98■■□□□ 1.43
TOM1-213ENST00000465529 CAMKK2Q96RR4 588 aa23.98■■□□□ 1.43
TOM1-213ENST00000465529 GGNBP2Q9H3C7 697 aa23.98■■□□□ 1.43
TOM1-213ENST00000465529 RREB1Q92766 1687 aa23.98■■□□□ 1.43
TOM1-213ENST00000465529 CCDC7Q96M83 1385 aa23.97■■□□□ 1.43
TOM1-213ENST00000465529 NLRP2Q9NX02 1062 aa23.97■■□□□ 1.43
TOM1-213ENST00000465529 MAP3K19Q56UN5 1328 aa23.96■■□□□ 1.43
TOM1-213ENST00000465529 FYB1O15117 783 aa23.96■■□□□ 1.43
TOM1-213ENST00000465529 PTF1AQ7RTS3 328 aa23.96■■□□□ 1.43
TOM1-213ENST00000465529 RGPD2P0DJD1 1756 aa23.96■■□□□ 1.43
TOM1-213ENST00000465529 NUP188Q5SRE5 1749 aa23.96■■□□□ 1.43
TOM1-213ENST00000465529 LTV1Q96GA3 475 aaPredicted RBP23.95■■□□□ 1.42
TOM1-213ENST00000465529 CDCA8Q53HL2 280 aa23.94■■□□□ 1.42
TOM1-213ENST00000465529 IP6K1Q92551 441 aa23.94■■□□□ 1.42
TOM1-213ENST00000465529 CDCA7Q9BWT1 371 aaPredicted RBP23.93■■□□□ 1.42
TOM1-213ENST00000465529 CARD14Q9BXL6 1004 aa23.93■■□□□ 1.42
TOM1-213ENST00000465529 TNS2Q63HR2 1409 aa23.93■■□□□ 1.42
TOM1-213ENST00000465529 RRS1Q15050 365 aaKnown RBP23.92■■□□□ 1.42
TOM1-213ENST00000465529 NSD3Q9BZ95 1437 aa23.92■■□□□ 1.42
TOM1-213ENST00000465529 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
TOM1-213ENST00000465529 HOXC9P31274 260 aa23.91■■□□□ 1.42
TOM1-213ENST00000465529 R3HDM1Q15032 1099 aaKnown RBP23.91■■□□□ 1.42
TOM1-213ENST00000465529 POLR3GLQ9BT43 218 aa23.91■■□□□ 1.42
TOM1-213ENST00000465529 FAM208AQ9UK61 1670 aaKnown RBP23.91■■□□□ 1.42
TOM1-213ENST00000465529 EXOC5O00471 708 aa23.9■■□□□ 1.42
TOM1-213ENST00000465529 AMPHP49418 695 aa23.89■■□□□ 1.41
TOM1-213ENST00000465529 PARD3Q8TEW0 1356 aa23.88■■□□□ 1.41
TOM1-213ENST00000465529 IL2RBP14784 551 aa23.87■■□□□ 1.41
TOM1-213ENST00000465529 EIF4G2P78344 907 aaKnown RBP eCLIP23.86■■□□□ 1.41
TOM1-213ENST00000465529 RGPD3A6NKT7 1758 aaPredicted RBP23.86■■□□□ 1.41
TOM1-213ENST00000465529 RGPD4Q7Z3J3 1758 aa23.86■■□□□ 1.41
TOM1-213ENST00000465529 BCL9O00512 1426 aa23.85■■□□□ 1.41
TOM1-213ENST00000465529 C11orf95C9JLR9 678 aaPredicted RBP23.85■■□□□ 1.41
TOM1-213ENST00000465529 LRP5O75197 1615 aa23.84■■□□□ 1.41
TOM1-213ENST00000465529 BCL11BQ9C0K0 894 aaPredicted RBP23.84■■□□□ 1.41
TOM1-213ENST00000465529 NHSQ6T4R5 1651 aa23.83■■□□□ 1.41
TOM1-213ENST00000465529 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
TOM1-213ENST00000465529 KCNQ2O43526 872 aa23.83■■□□□ 1.41
TOM1-213ENST00000465529 ACSBG1Q96GR2 724 aa23.82■■□□□ 1.4
TOM1-213ENST00000465529 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
TOM1-213ENST00000465529 USHBP1Q8N6Y0 703 aa23.8■■□□□ 1.4
TOM1-213ENST00000465529 KAT6BQ8WYB5 2073 aa23.8■■□□□ 1.4
TOM1-213ENST00000465529 MEGF6O75095 1541 aa23.79■■□□□ 1.4
TOM1-213ENST00000465529 HSP90AB2PQ58FF8 381 aa23.79■■□□□ 1.4
TOM1-213ENST00000465529 EMILIN1Q9Y6C2 1016 aa23.79■■□□□ 1.4
TOM1-213ENST00000465529 PLSCR1O15162 318 aa23.78■■□□□ 1.4
TOM1-213ENST00000465529 NBPF6Q5VWK0 638 aa23.78■■□□□ 1.4
TOM1-213ENST00000465529 NBPF4Q96M43 638 aa23.78■■□□□ 1.4
TOM1-213ENST00000465529 BTAF1O14981 1849 aa23.77■■□□□ 1.4
TOM1-213ENST00000465529 MAP2P11137 1827 aaKnown RBP23.77■■□□□ 1.4
TOM1-213ENST00000465529 ANKRD26Q9UPS8 1709 aa23.77■■□□□ 1.4
TOM1-213ENST00000465529 PROM2Q8N271 834 aa23.77■■□□□ 1.4
TOM1-213ENST00000465529 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
TOM1-213ENST00000465529 ANO8Q9HCE9 1232 aaPredicted RBP23.76■■□□□ 1.39
TOM1-213ENST00000465529 FLT4P35916 1363 aa23.76■■□□□ 1.39
TOM1-213ENST00000465529 INSRP06213 1382 aa23.75■■□□□ 1.39
TOM1-213ENST00000465529 NBPF14Q5TI25 921 aa23.74■■□□□ 1.39
TOM1-213ENST00000465529 CGNL1Q0VF96 1302 aa23.74■■□□□ 1.39
TOM1-213ENST00000465529 DOT1LQ8TEK3 1739 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms