RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 DDB1Q16531 1140 aa29.56■■■□□ 2.32
CSPG5-204ENST00000465441 PARP4Q9UKK3 1724 aaKnown RBP29.55■■■□□ 2.32
CSPG5-204ENST00000465441 TRIM26Q12899 539 aaPredicted RBP29.55■■■□□ 2.32
CSPG5-204ENST00000465441 C11orf95C9JLR9 678 aaPredicted RBP29.54■■■□□ 2.32
CSPG5-204ENST00000465441 CSB-PGBD3P0DP91 1061 aa29.54■■■□□ 2.32
CSPG5-204ENST00000465441 HDGFL2Q7Z4V5 671 aaPredicted RBP29.53■■■□□ 2.32
CSPG5-204ENST00000465441 NME9Q86XW9 330 aa29.53■■■□□ 2.32
CSPG5-204ENST00000465441 CARD10Q9BWT7 1032 aa29.53■■■□□ 2.32
CSPG5-204ENST00000465441 CD163L1Q9NR16 1453 aa29.53■■■□□ 2.32
CSPG5-204ENST00000465441 USP31Q70CQ4 1352 aa29.52■■■□□ 2.32
CSPG5-204ENST00000465441 PARD3Q8TEW0 1356 aa29.52■■■□□ 2.32
CSPG5-204ENST00000465441 PUS7Q96PZ0 661 aaKnown RBP29.51■■■□□ 2.31
CSPG5-204ENST00000465441 CDCA7Q9BWT1 371 aaPredicted RBP29.5■■■□□ 2.31
CSPG5-204ENST00000465441 RGPD5Q99666 1765 aa29.49■■■□□ 2.31
CSPG5-204ENST00000465441 MON2Q7Z3U7 1717 aa29.49■■■□□ 2.31
CSPG5-204ENST00000465441 NFAT5O94916 1531 aa29.49■■■□□ 2.31
CSPG5-204ENST00000465441 ST20-MTHFSA0A0A6YYL1 179 aa29.48■■■□□ 2.31
CSPG5-204ENST00000465441 LRP5O75197 1615 aa29.48■■■□□ 2.31
CSPG5-204ENST00000465441 OVOS2A0A0G2JMS6 1433 aa29.47■■■□□ 2.31
CSPG5-204ENST00000465441 OVOS2A0A0J9YW53 1432 aa29.47■■■□□ 2.31
CSPG5-204ENST00000465441 OVOS2Q6IE36 1432 aa29.47■■■□□ 2.31
CSPG5-204ENST00000465441 MARCH10Q8NA82 808 aaPredicted RBP29.47■■■□□ 2.31
CSPG5-204ENST00000465441 TESK2Q96S53 571 aa29.47■■■□□ 2.31
CSPG5-204ENST00000465441 TERF2IPQ9NYB0 399 aa29.47■■■□□ 2.31
CSPG5-204ENST00000465441 NBPF14Q5TI25 921 aa29.45■■■□□ 2.31
CSPG5-204ENST00000465441 EXOC5O00471 708 aa29.44■■■□□ 2.3
CSPG5-204ENST00000465441 PEAK1Q9H792 1746 aa29.43■■■□□ 2.3
CSPG5-204ENST00000465441 LRRC37A3O60309 1634 aa29.43■■■□□ 2.3
CSPG5-204ENST00000465441 PTF1AQ7RTS3 328 aa29.43■■■□□ 2.3
CSPG5-204ENST00000465441 PLSCR1O15162 318 aa29.42■■■□□ 2.3
CSPG5-204ENST00000465441 BCL11BQ9C0K0 894 aaPredicted RBP29.42■■■□□ 2.3
CSPG5-204ENST00000465441 EDC4Q6P2E9 1401 aaKnown RBP29.42■■■□□ 2.3
CSPG5-204ENST00000465441 A0A1W2PP64 1363 aa29.41■■■□□ 2.3
CSPG5-204ENST00000465441 CCDC7Q96M83 1385 aa29.4■■■□□ 2.3
CSPG5-204ENST00000465441 RREB1Q92766 1687 aa29.4■■■□□ 2.3
CSPG5-204ENST00000465441 SLC24A1O60721 1099 aa29.39■■■□□ 2.3
CSPG5-204ENST00000465441 NLRP2Q9NX02 1062 aa29.38■■■□□ 2.29
CSPG5-204ENST00000465441 ERBB3P21860 1342 aa29.38■■■□□ 2.29
CSPG5-204ENST00000465441 SBF2Q86WG5 1849 aa29.38■■■□□ 2.29
CSPG5-204ENST00000465441 ABCC6O95255 1503 aa29.36■■■□□ 2.29
CSPG5-204ENST00000465441 USP54Q70EL1 1684 aa29.36■■■□□ 2.29
CSPG5-204ENST00000465441 NUP188Q5SRE5 1749 aa29.36■■■□□ 2.29
CSPG5-204ENST00000465441 WNK3Q9BYP7 1800 aa29.36■■■□□ 2.29
CSPG5-204ENST00000465441 BCL9O00512 1426 aa29.36■■■□□ 2.29
CSPG5-204ENST00000465441 ANKRD24Q8TF21 1146 aa29.35■■■□□ 2.29
CSPG5-204ENST00000465441 PROM2Q8N271 834 aa29.33■■■□□ 2.29
CSPG5-204ENST00000465441 NINLQ9Y2I6 1382 aa29.32■■■□□ 2.28
CSPG5-204ENST00000465441 IP6K1Q92551 441 aa29.31■■■□□ 2.28
CSPG5-204ENST00000465441 IL2RBP14784 551 aa29.3■■■□□ 2.28
CSPG5-204ENST00000465441 LTN1O94822 1766 aa29.29■■■□□ 2.28
CSPG5-204ENST00000465441 COG3Q96JB2 828 aa29.29■■■□□ 2.28
CSPG5-204ENST00000465441 KCNQ2O43526 872 aa29.28■■■□□ 2.28
CSPG5-204ENST00000465441 FBLN1P23142 703 aa29.28■■■□□ 2.28
CSPG5-204ENST00000465441 TMF1P82094 1093 aa29.28■■■□□ 2.28
CSPG5-204ENST00000465441 TNS2Q63HR2 1409 aa29.26■■■□□ 2.27
CSPG5-204ENST00000465441 LTV1Q96GA3 475 aaPredicted RBP29.25■■■□□ 2.27
CSPG5-204ENST00000465441 ACSBG1Q96GR2 724 aa29.25■■■□□ 2.27
CSPG5-204ENST00000465441 ANO8Q9HCE9 1232 aaPredicted RBP29.25■■■□□ 2.27
CSPG5-204ENST00000465441 USP47Q96K76 1375 aa29.25■■■□□ 2.27
CSPG5-204ENST00000465441 TXNRD1Q16881 649 aa29.24■■■□□ 2.27
CSPG5-204ENST00000465441 SPON1Q9HCB6 807 aa29.23■■■□□ 2.27
CSPG5-204ENST00000465441 RGPD3A6NKT7 1758 aaPredicted RBP29.23■■■□□ 2.27
CSPG5-204ENST00000465441 RGPD4Q7Z3J3 1758 aa29.23■■■□□ 2.27
CSPG5-204ENST00000465441 ANKRD36BQ8N2N9 1353 aa29.23■■■□□ 2.27
CSPG5-204ENST00000465441 MAP3K19Q56UN5 1328 aa29.21■■■□□ 2.27
CSPG5-204ENST00000465441 FYB1O15117 783 aa29.2■■■□□ 2.26
CSPG5-204ENST00000465441 HOXC9P31274 260 aa29.2■■■□□ 2.26
CSPG5-204ENST00000465441 AMPHP49418 695 aa29.2■■■□□ 2.26
CSPG5-204ENST00000465441 PDGFDQ9GZP0 370 aaPredicted RBP29.17■■■□□ 2.26
CSPG5-204ENST00000465441 GGNBP2Q9H3C7 697 aa29.17■■■□□ 2.26
CSPG5-204ENST00000465441 TIMELESSQ9UNS1 1208 aa29.16■■■□□ 2.26
CSPG5-204ENST00000465441 CDCA8Q53HL2 280 aa29.15■■■□□ 2.26
CSPG5-204ENST00000465441 DDX54Q8TDD1 881 aaKnown RBP29.15■■■□□ 2.26
CSPG5-204ENST00000465441 RRS1Q15050 365 aaKnown RBP29.14■■■□□ 2.26
CSPG5-204ENST00000465441 PCGF6Q9BYE7 350 aa29.14■■■□□ 2.26
CSPG5-204ENST00000465441 STK32BQ9NY57 414 aa29.14■■■□□ 2.26
CSPG5-204ENST00000465441 PPP1R1BQ9UD71 204 aaPredicted RBP29.14■■■□□ 2.26
CSPG5-204ENST00000465441 SLC15A2Q16348 729 aa29.13■■■□□ 2.25
CSPG5-204ENST00000465441 KAT6BQ8WYB5 2073 aa29.1■■■□□ 2.25
CSPG5-204ENST00000465441 NHSQ6T4R5 1651 aa29.1■■■□□ 2.25
CSPG5-204ENST00000465441 ZBTB7AO95365 584 aa29.09■■■□□ 2.25
CSPG5-204ENST00000465441 NBPF6Q5VWK0 638 aa29.07■■■□□ 2.24
CSPG5-204ENST00000465441 NBPF4Q96M43 638 aa29.07■■■□□ 2.24
CSPG5-204ENST00000465441 CARD14Q9BXL6 1004 aa29.07■■■□□ 2.24
CSPG5-204ENST00000465441 ATF5Q9Y2D1 282 aaPredicted RBP29.06■■■□□ 2.24
CSPG5-204ENST00000465441 CASZ1Q86V15 1759 aa29.06■■■□□ 2.24
CSPG5-204ENST00000465441 CLSPNQ9HAW4 1339 aa29.05■■■□□ 2.24
CSPG5-204ENST00000465441 ZCRB1Q8TBF4 217 aaKnown RBP29.05■■■□□ 2.24
CSPG5-204ENST00000465441 FAM208AQ9UK61 1670 aaKnown RBP29.05■■■□□ 2.24
CSPG5-204ENST00000465441 RTL1A6NKG5 1358 aa29.04■■■□□ 2.24
CSPG5-204ENST00000465441 LRRC4BQ9NT99 713 aa29.03■■■□□ 2.24
CSPG5-204ENST00000465441 RGPD2P0DJD1 1756 aa29.03■■■□□ 2.24
CSPG5-204ENST00000465441 PTGER2P43116 358 aa29.02■■■□□ 2.24
CSPG5-204ENST00000465441 PRIM1P49642 420 aaKnown RBP29.02■■■□□ 2.24
CSPG5-204ENST00000465441 HSP90AB2PQ58FF8 381 aa29.02■■■□□ 2.24
CSPG5-204ENST00000465441 USHBP1Q8N6Y0 703 aa29.02■■■□□ 2.24
CSPG5-204ENST00000465441 BTAF1O14981 1849 aa29.01■■■□□ 2.24
CSPG5-204ENST00000465441 SYTL4Q96C24 671 aaPredicted RBP29■■■□□ 2.23
CSPG5-204ENST00000465441 MEGF6O75095 1541 aa28.99■■■□□ 2.23
CSPG5-204ENST00000465441 ZNF827Q17R98 1081 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms