RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 USP6P35125 1406 aa17.51■□□□□ 0.39
TRA2B-208ENST00000465245 NLRP6P59044 892 aa17.5■□□□□ 0.39
TRA2B-208ENST00000465245 TOM1L2Q6ZVM7 507 aa17.5■□□□□ 0.39
TRA2B-208ENST00000465245 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
TRA2B-208ENST00000465245 CABP2Q9NPB3 220 aa17.49■□□□□ 0.39
TRA2B-208ENST00000465245 CENPJQ9HC77 1338 aaPredicted RBP17.48■□□□□ 0.39
TRA2B-208ENST00000465245 NBPF1Q3BBV0 1214 aa17.48■□□□□ 0.39
TRA2B-208ENST00000465245 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
TRA2B-208ENST00000465245 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
TRA2B-208ENST00000465245 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
TRA2B-208ENST00000465245 CHD4Q14839 1912 aa17.47■□□□□ 0.39
TRA2B-208ENST00000465245 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
TRA2B-208ENST00000465245 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
TRA2B-208ENST00000465245 MARCH10Q8NA82 808 aaPredicted RBP17.46■□□□□ 0.39
TRA2B-208ENST00000465245 BCL9O00512 1426 aa17.46■□□□□ 0.39
TRA2B-208ENST00000465245 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
TRA2B-208ENST00000465245 PROM2Q8N271 834 aa17.44■□□□□ 0.38
TRA2B-208ENST00000465245 CDCA7Q9BWT1 371 aaPredicted RBP17.44■□□□□ 0.38
TRA2B-208ENST00000465245 AXIN2Q9Y2T1 843 aa17.44■□□□□ 0.38
TRA2B-208ENST00000465245 PTGER2P43116 358 aa17.43■□□□□ 0.38
TRA2B-208ENST00000465245 STK32BQ9NY57 414 aa17.43■□□□□ 0.38
TRA2B-208ENST00000465245 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
TRA2B-208ENST00000465245 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
TRA2B-208ENST00000465245 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
TRA2B-208ENST00000465245 TXNRD1Q16881 649 aa17.41■□□□□ 0.38
TRA2B-208ENST00000465245 ZNF784Q8NCA9 323 aaPredicted RBP17.41■□□□□ 0.38
TRA2B-208ENST00000465245 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
TRA2B-208ENST00000465245 SLC15A2Q16348 729 aa17.4■□□□□ 0.38
TRA2B-208ENST00000465245 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
TRA2B-208ENST00000465245 TNS2Q63HR2 1409 aa17.39■□□□□ 0.38
TRA2B-208ENST00000465245 NFAT5O94916 1531 aa17.39■□□□□ 0.37
TRA2B-208ENST00000465245 SOX12O15370 315 aa17.39■□□□□ 0.37
TRA2B-208ENST00000465245 ARHGEF25Q86VW2 580 aa17.39■□□□□ 0.37
TRA2B-208ENST00000465245 KCNH5Q8NCM2 988 aa17.39■□□□□ 0.37
TRA2B-208ENST00000465245 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
TRA2B-208ENST00000465245 SYT17Q9BSW7 474 aa17.38■□□□□ 0.37
TRA2B-208ENST00000465245 MTFR1LQ9H019 292 aa17.38■□□□□ 0.37
TRA2B-208ENST00000465245 KAT6BQ8WYB5 2073 aa17.38■□□□□ 0.37
TRA2B-208ENST00000465245 BTAF1O14981 1849 aa17.37■□□□□ 0.37
TRA2B-208ENST00000465245 ABCC6O95255 1503 aa17.37■□□□□ 0.37
TRA2B-208ENST00000465245 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
TRA2B-208ENST00000465245 EXOC5O00471 708 aa17.37■□□□□ 0.37
TRA2B-208ENST00000465245 TTC21BQ7Z4L5 1316 aa17.37■□□□□ 0.37
TRA2B-208ENST00000465245 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
TRA2B-208ENST00000465245 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
TRA2B-208ENST00000465245 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
TRA2B-208ENST00000465245 LTN1O94822 1766 aa17.35■□□□□ 0.37
TRA2B-208ENST00000465245 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
TRA2B-208ENST00000465245 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
TRA2B-208ENST00000465245 SGIP1Q9BQI5 828 aa17.34■□□□□ 0.37
TRA2B-208ENST00000465245 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
TRA2B-208ENST00000465245 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
TRA2B-208ENST00000465245 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
TRA2B-208ENST00000465245 QSER1Q2KHR3 1735 aa17.31■□□□□ 0.36
TRA2B-208ENST00000465245 SENP3-EIF4A1A0A087X0R7 540 aa17.31■□□□□ 0.36
TRA2B-208ENST00000465245 ARXQ96QS3 562 aa17.31■□□□□ 0.36
TRA2B-208ENST00000465245 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
TRA2B-208ENST00000465245 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
TRA2B-208ENST00000465245 ERBB3P21860 1342 aa17.28■□□□□ 0.36
TRA2B-208ENST00000465245 C1QTNF8P60827 252 aa17.28■□□□□ 0.36
TRA2B-208ENST00000465245 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
TRA2B-208ENST00000465245 ZNF827Q17R98 1081 aa17.27■□□□□ 0.36
TRA2B-208ENST00000465245 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.36
TRA2B-208ENST00000465245 IL2RBP14784 551 aa17.26■□□□□ 0.35
TRA2B-208ENST00000465245 COL24A1Q17RW2 1714 aa17.26■□□□□ 0.35
TRA2B-208ENST00000465245 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
TRA2B-208ENST00000465245 GPR162Q16538 588 aa17.25■□□□□ 0.35
TRA2B-208ENST00000465245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.354e-7■■□□□ 12.6
TRA2B-208ENST00000465245 L3MBTL2Q969R5 705 aa17.25■□□□□ 0.35
TRA2B-208ENST00000465245 USP31Q70CQ4 1352 aa17.25■□□□□ 0.35
TRA2B-208ENST00000465245 FAM208AQ9UK61 1670 aaKnown RBP17.24■□□□□ 0.35
TRA2B-208ENST00000465245 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
TRA2B-208ENST00000465245 CEP350Q5VT06 3117 aa17.24■□□□□ 0.35
TRA2B-208ENST00000465245 LRRC4BQ9NT99 713 aa17.23■□□□□ 0.35
TRA2B-208ENST00000465245 DOT1LQ8TEK3 1739 aa17.22■□□□□ 0.35
TRA2B-208ENST00000465245 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
TRA2B-208ENST00000465245 NME9Q86XW9 330 aa17.21■□□□□ 0.35
TRA2B-208ENST00000465245 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
TRA2B-208ENST00000465245 LY75O60449 1722 aa17.21■□□□□ 0.35
TRA2B-208ENST00000465245 CD163L1Q9NR16 1453 aa17.2■□□□□ 0.34
TRA2B-208ENST00000465245 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
TRA2B-208ENST00000465245 POLD1P28340 1107 aa17.2■□□□□ 0.34
TRA2B-208ENST00000465245 SLC16A10Q8TF71 515 aa17.2■□□□□ 0.34
TRA2B-208ENST00000465245 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
TRA2B-208ENST00000465245 SHANK3Q9BYB0 1731 aa17.19■□□□□ 0.34
TRA2B-208ENST00000465245 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
TRA2B-208ENST00000465245 SLC27A3Q5K4L6 730 aa17.19■□□□□ 0.34
TRA2B-208ENST00000465245 PNPLA7Q6ZV29 1317 aa17.18■□□□□ 0.34
TRA2B-208ENST00000465245 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
TRA2B-208ENST00000465245 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
TRA2B-208ENST00000465245 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
TRA2B-208ENST00000465245 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
TRA2B-208ENST00000465245 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
TRA2B-208ENST00000465245 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
TRA2B-208ENST00000465245 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
TRA2B-208ENST00000465245 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
TRA2B-208ENST00000465245 KCNQ4P56696 695 aa17.14■□□□□ 0.33
TRA2B-208ENST00000465245 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
TRA2B-208ENST00000465245 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
TRA2B-208ENST00000465245 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms