RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 OVOS2A0A0J9YW53 1432 aa32.41■■■□□ 2.78
USP42-205ENST00000465073 OVOS2Q6IE36 1432 aa32.41■■■□□ 2.78
USP42-205ENST00000465073 AKAP12Q02952 1782 aa32.41■■■□□ 2.78
USP42-205ENST00000465073 NBPF14Q5TI25 921 aa32.4■■■□□ 2.78
USP42-205ENST00000465073 CDCA7Q9BWT1 371 aaPredicted RBP32.4■■■□□ 2.78
USP42-205ENST00000465073 SOX12O15370 315 aa32.39■■■□□ 2.78
USP42-205ENST00000465073 CARD10Q9BWT7 1032 aa32.36■■■□□ 2.77
USP42-205ENST00000465073 CSB-PGBD3P0DP91 1061 aa32.35■■■□□ 2.77
USP42-205ENST00000465073 RREB1Q92766 1687 aa32.35■■■□□ 2.77
USP42-205ENST00000465073 LRRC37A3O60309 1634 aa32.33■■■□□ 2.77
USP42-205ENST00000465073 PEAK1Q9H792 1746 aa32.33■■■□□ 2.77
USP42-205ENST00000465073 NFAT5O94916 1531 aa32.33■■■□□ 2.77
USP42-205ENST00000465073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.32■■■□□ 2.76
USP42-205ENST00000465073 USP31Q70CQ4 1352 aa32.32■■■□□ 2.76
USP42-205ENST00000465073 TONSLQ96HA7 1378 aa32.31■■■□□ 2.76
USP42-205ENST00000465073 PLSCR1O15162 318 aa32.3■■■□□ 2.76
USP42-205ENST00000465073 MARCH10Q8NA82 808 aaPredicted RBP32.3■■■□□ 2.76
USP42-205ENST00000465073 TMC1Q8TDI8 760 aa32.3■■■□□ 2.76
USP42-205ENST00000465073 BCL11BQ9C0K0 894 aaPredicted RBP32.3■■■□□ 2.76
USP42-205ENST00000465073 NUP188Q5SRE5 1749 aa32.3■■■□□ 2.76
USP42-205ENST00000465073 HDGFL2Q7Z4V5 671 aaPredicted RBP32.29■■■□□ 2.76
USP42-205ENST00000465073 MON2Q7Z3U7 1717 aa32.28■■■□□ 2.76
USP42-205ENST00000465073 ABCC6O95255 1503 aa32.28■■■□□ 2.76
USP42-205ENST00000465073 BCL9O00512 1426 aa32.27■■■□□ 2.76
USP42-205ENST00000465073 CD163L1Q9NR16 1453 aa32.27■■■□□ 2.76
USP42-205ENST00000465073 SLC12A5Q9H2X9 1139 aa32.27■■■□□ 2.76
USP42-205ENST00000465073 CCDC7Q96M83 1385 aa32.26■■■□□ 2.76
USP42-205ENST00000465073 NME9Q86XW9 330 aa32.26■■■□□ 2.75
USP42-205ENST00000465073 PUS7Q96PZ0 661 aaKnown RBP32.26■■■□□ 2.75
USP42-205ENST00000465073 EXOC5O00471 708 aa32.25■■■□□ 2.75
USP42-205ENST00000465073 RGPD5Q99666 1765 aa32.24■■■□□ 2.75
USP42-205ENST00000465073 TERF2IPQ9NYB0 399 aa32.24■■■□□ 2.75
USP42-205ENST00000465073 WNK3Q9BYP7 1800 aa32.23■■■□□ 2.75
USP42-205ENST00000465073 PTF1AQ7RTS3 328 aa32.23■■■□□ 2.75
USP42-205ENST00000465073 SBF2Q86WG5 1849 aa32.22■■■□□ 2.75
USP42-205ENST00000465073 EDC4Q6P2E9 1401 aaKnown RBP32.21■■■□□ 2.75
USP42-205ENST00000465073 RGPD3A6NKT7 1758 aaPredicted RBP32.2■■■□□ 2.75
USP42-205ENST00000465073 RGPD4Q7Z3J3 1758 aa32.2■■■□□ 2.75
USP42-205ENST00000465073 ERBB3P21860 1342 aa32.19■■■□□ 2.74
USP42-205ENST00000465073 USP54Q70EL1 1684 aa32.19■■■□□ 2.74
USP42-205ENST00000465073 SPON1Q9HCB6 807 aa32.17■■■□□ 2.74
USP42-205ENST00000465073 NLRP2Q9NX02 1062 aa32.17■■■□□ 2.74
USP42-205ENST00000465073 A0A1W2PP64 1363 aa32.16■■■□□ 2.74
USP42-205ENST00000465073 KCNQ2O43526 872 aa32.15■■■□□ 2.74
USP42-205ENST00000465073 SLC24A1O60721 1099 aa32.15■■■□□ 2.74
USP42-205ENST00000465073 PROM2Q8N271 834 aa32.15■■■□□ 2.74
USP42-205ENST00000465073 TNS2Q63HR2 1409 aa32.14■■■□□ 2.74
USP42-205ENST00000465073 TESK2Q96S53 571 aa32.13■■■□□ 2.73
USP42-205ENST00000465073 ANKRD24Q8TF21 1146 aa32.12■■■□□ 2.73
USP42-205ENST00000465073 ANO8Q9HCE9 1232 aaPredicted RBP32.12■■■□□ 2.73
USP42-205ENST00000465073 NINLQ9Y2I6 1382 aa32.12■■■□□ 2.73
USP42-205ENST00000465073 ST20-MTHFSA0A0A6YYL1 179 aa32.11■■■□□ 2.73
USP42-205ENST00000465073 IL2RBP14784 551 aa32.1■■■□□ 2.73
USP42-205ENST00000465073 PPP1R1BQ9UD71 204 aaPredicted RBP32.1■■■□□ 2.73
USP42-205ENST00000465073 TXNRD1Q16881 649 aa32.09■■■□□ 2.73
USP42-205ENST00000465073 LTN1O94822 1766 aa32.06■■■□□ 2.72
USP42-205ENST00000465073 IP6K1Q92551 441 aa32.06■■■□□ 2.72
USP42-205ENST00000465073 COG3Q96JB2 828 aa32.03■■■□□ 2.72
USP42-205ENST00000465073 STK32BQ9NY57 414 aa32.03■■■□□ 2.72
USP42-205ENST00000465073 ACSBG1Q96GR2 724 aa32.01■■■□□ 2.71
USP42-205ENST00000465073 TRIM26Q12899 539 aaPredicted RBP31.99■■■□□ 2.71
USP42-205ENST00000465073 SLC15A2Q16348 729 aa31.98■■■□□ 2.71
USP42-205ENST00000465073 PDGFDQ9GZP0 370 aaPredicted RBP31.98■■■□□ 2.71
USP42-205ENST00000465073 NHSQ6T4R5 1651 aa31.98■■■□□ 2.71
USP42-205ENST00000465073 LTV1Q96GA3 475 aaPredicted RBP31.97■■■□□ 2.71
USP42-205ENST00000465073 CASZ1Q86V15 1759 aa31.96■■■□□ 2.71
USP42-205ENST00000465073 ANKRD36BQ8N2N9 1353 aa31.96■■■□□ 2.71
USP42-205ENST00000465073 MAP3K19Q56UN5 1328 aa31.95■■■□□ 2.71
USP42-205ENST00000465073 ZBTB7AO95365 584 aa31.95■■■□□ 2.7
USP42-205ENST00000465073 AMPHP49418 695 aa31.94■■■□□ 2.7
USP42-205ENST00000465073 TMF1P82094 1093 aa31.94■■■□□ 2.7
USP42-205ENST00000465073 DCAF8L1A6NGE4 600 aa31.93■■■□□ 2.7
USP42-205ENST00000465073 HOXC9P31274 260 aa31.93■■■□□ 2.7
USP42-205ENST00000465073 DDX54Q8TDD1 881 aaKnown RBP31.91■■■□□ 2.7
USP42-205ENST00000465073 USP47Q96K76 1375 aa31.9■■■□□ 2.7
USP42-205ENST00000465073 FAM208AQ9UK61 1670 aaKnown RBP31.89■■■□□ 2.7
USP42-205ENST00000465073 FBLN1P23142 703 aa31.89■■■□□ 2.7
USP42-205ENST00000465073 PTGER2P43116 358 aa31.89■■■□□ 2.7
USP42-205ENST00000465073 ATF5Q9Y2D1 282 aaPredicted RBP31.89■■■□□ 2.7
USP42-205ENST00000465073 FYB1O15117 783 aa31.86■■■□□ 2.69
USP42-205ENST00000465073 MTFR1LQ9H019 292 aa31.86■■■□□ 2.69
USP42-205ENST00000465073 CDCA8Q53HL2 280 aa31.85■■■□□ 2.69
USP42-205ENST00000465073 RTL1A6NKG5 1358 aa31.85■■■□□ 2.69
USP42-205ENST00000465073 YY1P25490 414 aa31.84■■■□□ 2.69
USP42-205ENST00000465073 BTAF1O14981 1849 aa31.84■■■□□ 2.69
USP42-205ENST00000465073 GGNBP2Q9H3C7 697 aa31.83■■■□□ 2.69
USP42-205ENST00000465073 KAT6BQ8WYB5 2073 aa31.82■■■□□ 2.68
USP42-205ENST00000465073 ZCRB1Q8TBF4 217 aaKnown RBP31.82■■■□□ 2.68
USP42-205ENST00000465073 LRRC4BQ9NT99 713 aa31.82■■■□□ 2.68
USP42-205ENST00000465073 RRS1Q15050 365 aaKnown RBP31.81■■■□□ 2.68
USP42-205ENST00000465073 SLC27A3Q5K4L6 730 aa31.81■■■□□ 2.68
USP42-205ENST00000465073 PAPPAQ13219 1627 aa31.8■■■□□ 2.68
USP42-205ENST00000465073 SGIP1Q9BQI5 828 aa31.78■■■□□ 2.68
USP42-205ENST00000465073 PRIM1P49642 420 aaKnown RBP31.78■■■□□ 2.68
USP42-205ENST00000465073 ZNF827Q17R98 1081 aa31.78■■■□□ 2.68
USP42-205ENST00000465073 NBPF6Q5VWK0 638 aa31.77■■■□□ 2.68
USP42-205ENST00000465073 SYTL4Q96C24 671 aaPredicted RBP31.77■■■□□ 2.68
USP42-205ENST00000465073 NBPF4Q96M43 638 aa31.77■■■□□ 2.68
USP42-205ENST00000465073 MYOM1P52179 1685 aa31.76■■■□□ 2.67
USP42-205ENST00000465073 TIMELESSQ9UNS1 1208 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms