RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SWT1Q5T5J6 900 aaKnown RBP9.24□□□□□ -0.93
CLSTN1-204ENST00000464286 CDC42BPAQ5VT25 1732 aa9.23□□□□□ -0.93
CLSTN1-204ENST00000464286 FCHSD2O94868 740 aa9.23□□□□□ -0.93
CLSTN1-204ENST00000464286 HDGFP51858 240 aaKnown RBP9.23□□□□□ -0.93
CLSTN1-204ENST00000464286 ISY1Q9ULR0 285 aaKnown RBP9.23□□□□□ -0.93
CLSTN1-204ENST00000464286 CGNL1Q0VF96 1302 aa9.23□□□□□ -0.93
CLSTN1-204ENST00000464286 NPC1L1Q9UHC9 1359 aa9.23□□□□□ -0.93
CLSTN1-204ENST00000464286 ERBINQ96RT1 1412 aa9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 CCDC141Q6ZP82 1450 aa9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 MRC2Q9UBG0 1479 aa9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 DCAF11Q8TEB1 546 aa9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 FRAT1Q92837 279 aaPredicted RBP9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 SCAPERQ9BY12 1400 aa9.22□□□□□ -0.93
CLSTN1-204ENST00000464286 UNC13BO14795 1591 aa9.21□□□□□ -0.93
CLSTN1-204ENST00000464286 MAST1Q9Y2H9 1570 aa9.21□□□□□ -0.93
CLSTN1-204ENST00000464286 PTMSP20962 102 aa9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 KCNC4Q03721 635 aa9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 SMYD5Q6GMV2 418 aa9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 PIK3C2GO75747 1445 aa9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 FAM135AQ9P2D6 1515 aa9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 ZNF608Q9ULD9 1512 aaPredicted RBP9.21□□□□□ -0.94
CLSTN1-204ENST00000464286 SYNMO15061 1565 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 PLXNC1O60486 1568 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 PER1O15534 1290 aaPredicted RBP9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 RNF40O75150 1001 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 PDE3AQ14432 1141 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 ZNF644Q9H582 1327 aaPredicted RBP9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 SYNJ2O15056 1496 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 ATP10AO60312 1499 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 GRIN2AQ12879 1464 aa9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 MAGI1Q96QZ7 1491 aaPredicted RBP9.2□□□□□ -0.94
CLSTN1-204ENST00000464286 EIF5BO60841 1220 aaKnown RBP9.19□□□□□ -0.94
CLSTN1-204ENST00000464286 CNGB1Q14028 1251 aaPredicted RBP9.19□□□□□ -0.94
CLSTN1-204ENST00000464286 TJAP1Q5JTD0 557 aa9.19□□□□□ -0.94
CLSTN1-204ENST00000464286 KNSTRNQ9Y448 316 aa9.19□□□□□ -0.94
CLSTN1-204ENST00000464286 PRG4Q92954 1404 aaPredicted RBP9.19□□□□□ -0.94
CLSTN1-204ENST00000464286 NKTRP30414 1462 aaKnown RBP9.19□□□□□ -0.94
CLSTN1-204ENST00000464286 RNF17Q9BXT8 1623 aaKnown RBP9.19□□□□□ -0.94
CLSTN1-204ENST00000464286 E9PSI1 815 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 RGS20O76081 388 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 APLP1P51693 650 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 C8orf34Q49A92 452 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 ABCC10Q5T3U5 1492 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 IQGAP3Q86VI3 1631 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 RBM46Q8TBY0 533 aaKnown RBP9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 BRPF3Q9ULD4 1205 aa9.18□□□□□ -0.94
CLSTN1-204ENST00000464286 MYO5CQ9NQX4 1742 aa9.17□□□□□ -0.94
CLSTN1-204ENST00000464286 DNAJB2P25686 324 aa9.17□□□□□ -0.94
CLSTN1-204ENST00000464286 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
CLSTN1-204ENST00000464286 ASXL1Q8IXJ9 1541 aa9.16□□□□□ -0.94
CLSTN1-204ENST00000464286 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
CLSTN1-204ENST00000464286 GPR37O15354 613 aa9.16□□□□□ -0.94
CLSTN1-204ENST00000464286 HIC1Q14526 733 aa9.16□□□□□ -0.94
CLSTN1-204ENST00000464286 PANK3Q9H999 370 aa9.16□□□□□ -0.94
CLSTN1-204ENST00000464286 ZNF521Q96K83 1311 aa9.15□□□□□ -0.94
CLSTN1-204ENST00000464286 SLFN5Q08AF3 891 aa9.15□□□□□ -0.94
CLSTN1-204ENST00000464286 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
CLSTN1-204ENST00000464286 MTRQ99707 1265 aa9.15□□□□□ -0.94
CLSTN1-204ENST00000464286 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
CLSTN1-204ENST00000464286 PREX2Q70Z35 1606 aa9.15□□□□□ -0.94
CLSTN1-204ENST00000464286 ABCA8O94911 1581 aa9.15□□□□□ -0.95
CLSTN1-204ENST00000464286 KIAA1210Q9ULL0 1709 aa9.14□□□□□ -0.95
CLSTN1-204ENST00000464286 FRAT2O75474 233 aaPredicted RBP9.14□□□□□ -0.95
CLSTN1-204ENST00000464286 FECHP22830 423 aa9.14□□□□□ -0.95
CLSTN1-204ENST00000464286 NECTIN2Q92692 538 aa9.14□□□□□ -0.95
CLSTN1-204ENST00000464286 A2MP01023 1474 aa9.14□□□□□ -0.95
CLSTN1-204ENST00000464286 IQGAP1P46940 1657 aa9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 GOLGA6L3A6NEY3 463 aa9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 GNPATO15228 680 aa9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 PLIN1O60240 522 aa9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 CANXP27824 592 aaKnown RBP9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 CC2D1BQ5T0F9 858 aaKnown RBP9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 TRMT2AQ8IZ69 625 aaKnown RBP9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 PXYLP1Q8TE99 480 aa9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 IL21Q9HBE4 155 aa9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 DUOX2Q9NRD8 1548 aa9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 KDM5AP29375 1690 aaKnown RBP9.13□□□□□ -0.95
CLSTN1-204ENST00000464286 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 RRP9O43818 475 aaKnown RBP9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 PPP2R1AP30153 589 aa9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 SLC4A3P48751 1232 aa9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 ZNF516Q92618 1163 aa9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 TESK2Q96S53 571 aa9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 PNNQ9H307 717 aaKnown RBP9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 ADAMTS8Q9UP79 889 aa9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 NEURL4Q96JN8 1562 aa9.12□□□□□ -0.95
CLSTN1-204ENST00000464286 CENPJQ9HC77 1338 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 SCAF11Q99590 1463 aaKnown RBP9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 ARID3CA6NKF2 412 aa9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 OATP04181 439 aa9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 RGS3P49796 1198 aa9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 MRE11P49959 708 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms