RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 HOXC9P31274 260 aa25.02■■□□□ 1.6
CCDC78-206ENST00000463539 GCP02774 474 aa25.01■■□□□ 1.59
CCDC78-206ENST00000463539 PRKAR2BP31323 418 aa25.01■■□□□ 1.59
CCDC78-206ENST00000463539 NEUROD2Q15784 382 aa25.01■■□□□ 1.59
CCDC78-206ENST00000463539 NEFMP07197 916 aa25■■□□□ 1.59
CCDC78-206ENST00000463539 GOLGA2Q08379 1002 aa25■■□□□ 1.59
CCDC78-206ENST00000463539 NCBP3Q53F19 620 aaKnown RBP25■■□□□ 1.59
CCDC78-206ENST00000463539 PLEKHG5O94827 1062 aa24.99■■□□□ 1.59
CCDC78-206ENST00000463539 SPATA31A3Q5VYP0 1347 aa24.99■■□□□ 1.59
CCDC78-206ENST00000463539 ARHGEF10O15013 1369 aa24.99■■□□□ 1.59
CCDC78-206ENST00000463539 CCDC27Q2M243 656 aa24.98■■□□□ 1.59
CCDC78-206ENST00000463539 WWC1Q8IX03 1113 aa24.98■■□□□ 1.59
CCDC78-206ENST00000463539 PHF23Q9BUL5 403 aaPredicted RBP24.97■■□□□ 1.59
CCDC78-206ENST00000463539 TMPOP42166 694 aaKnown RBP24.96■■□□□ 1.59
CCDC78-206ENST00000463539 IP6K1Q92551 441 aa24.96■■□□□ 1.59
CCDC78-206ENST00000463539 SUPT16HQ9Y5B9 1047 aaKnown RBP24.96■■□□□ 1.59
CCDC78-206ENST00000463539 SOS2Q07890 1332 aaPredicted RBP24.96■■□□□ 1.59
CCDC78-206ENST00000463539 ZBTB7CA1YPR0 619 aa24.95■■□□□ 1.58
CCDC78-206ENST00000463539 SULT6B1Q6IMI4 303 aa24.95■■□□□ 1.58
CCDC78-206ENST00000463539 MED1Q15648 1581 aaPredicted RBP24.95■■□□□ 1.58
CCDC78-206ENST00000463539 LTN1O94822 1766 aa24.94■■□□□ 1.58
CCDC78-206ENST00000463539 RGPD1P0DJD0 1748 aa24.94■■□□□ 1.58
CCDC78-206ENST00000463539 ARHGEF25Q86VW2 580 aa24.94■■□□□ 1.58
CCDC78-206ENST00000463539 AEBP1Q8IUX7 1158 aa24.93■■□□□ 1.58
CCDC78-206ENST00000463539 PHRF1Q9P1Y6 1649 aaKnown RBP24.93■■□□□ 1.58
CCDC78-206ENST00000463539 E9PSI1 815 aa24.92■■□□□ 1.58
CCDC78-206ENST00000463539 NEFLP07196 543 aa24.92■■□□□ 1.58
CCDC78-206ENST00000463539 SLFN5Q08AF3 891 aa24.92■■□□□ 1.58
CCDC78-206ENST00000463539 PHACTR3Q96KR7 559 aa24.92■■□□□ 1.58
CCDC78-206ENST00000463539 IGSF1Q8N6C5 1336 aa24.91■■□□□ 1.58
CCDC78-206ENST00000463539 RIPK4P57078 832 aa24.91■■□□□ 1.58
CCDC78-206ENST00000463539 WDR63Q8IWG1 891 aa24.91■■□□□ 1.58
CCDC78-206ENST00000463539 DUSP27Q5VZP5 1158 aa24.9■■□□□ 1.58
CCDC78-206ENST00000463539 LTV1Q96GA3 475 aaPredicted RBP24.9■■□□□ 1.58
CCDC78-206ENST00000463539 EYA1Q99502 592 aa24.9■■□□□ 1.58
CCDC78-206ENST00000463539 NFE2L2Q16236 605 aa24.89■■□□□ 1.58
CCDC78-206ENST00000463539 NHSL1Q5SYE7 1610 aa24.89■■□□□ 1.57
CCDC78-206ENST00000463539 SPINK5Q9NQ38 1064 aaPredicted RBP24.89■■□□□ 1.57
CCDC78-206ENST00000463539 KDRP35968 1356 aa24.88■■□□□ 1.57
CCDC78-206ENST00000463539 ZC3H6P61129 1189 aaKnown RBP24.87■■□□□ 1.57
CCDC78-206ENST00000463539 TRMT2AQ8IZ69 625 aaKnown RBP24.87■■□□□ 1.57
CCDC78-206ENST00000463539 CABLES1Q8TDN4 633 aa24.87■■□□□ 1.57
CCDC78-206ENST00000463539 TRIM35Q9UPQ4 493 aa24.87■■□□□ 1.57
CCDC78-206ENST00000463539 RCAN3Q9UKA8 241 aa24.85■■□□□ 1.57
CCDC78-206ENST00000463539 ROBO1Q9Y6N7 1651 aa24.83■■□□□ 1.57
CCDC78-206ENST00000463539 FKBP8Q14318 412 aa24.82■■□□□ 1.56
CCDC78-206ENST00000463539 CRYBG1Q9Y4K1 1723 aa24.82■■□□□ 1.56
CCDC78-206ENST00000463539 LMOD3Q0VAK6 560 aa24.81■■□□□ 1.56
CCDC78-206ENST00000463539 CPDO75976 1380 aa24.81■■□□□ 1.56
CCDC78-206ENST00000463539 ANKRD24Q8TF21 1146 aa24.8■■□□□ 1.56
CCDC78-206ENST00000463539 MYH16Q9H6N6 1097 aa24.8■■□□□ 1.56
CCDC78-206ENST00000463539 AXIN2Q9Y2T1 843 aa24.8■■□□□ 1.56
CCDC78-206ENST00000463539 IL16Q14005 1332 aa24.79■■□□□ 1.56
CCDC78-206ENST00000463539 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
CCDC78-206ENST00000463539 RNF123Q5XPI4 1314 aa24.79■■□□□ 1.56
CCDC78-206ENST00000463539 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
CCDC78-206ENST00000463539 ABCC6O95255 1503 aa24.78■■□□□ 1.56
CCDC78-206ENST00000463539 NBPF6Q5VWK0 638 aa24.78■■□□□ 1.56
CCDC78-206ENST00000463539 NBPF4Q96M43 638 aa24.78■■□□□ 1.56
CCDC78-206ENST00000463539 HAP1P54257 671 aaPredicted RBP24.77■■□□□ 1.56
CCDC78-206ENST00000463539 USHBP1Q8N6Y0 703 aa24.77■■□□□ 1.56
CCDC78-206ENST00000463539 TOM1O60784 492 aa24.77■■□□□ 1.56
CCDC78-206ENST00000463539 LRRC59Q96AG4 307 aaKnown RBP24.77■■□□□ 1.56
CCDC78-206ENST00000463539 ERBB3P21860 1342 aa24.76■■□□□ 1.55
CCDC78-206ENST00000463539 CALD1Q05682 793 aaKnown RBP24.76■■□□□ 1.55
CCDC78-206ENST00000463539 IRX6P78412 446 aaPredicted RBP24.74■■□□□ 1.55
CCDC78-206ENST00000463539 CHRNA2Q15822 529 aa24.74■■□□□ 1.55
CCDC78-206ENST00000463539 GAS2L2Q8NHY3 880 aa24.74■■□□□ 1.55
CCDC78-206ENST00000463539 MTHFSDQ2M296 383 aaKnown RBP24.73■■□□□ 1.55
CCDC78-206ENST00000463539 PRDM11Q9NQV5 511 aa24.72■■□□□ 1.55
CCDC78-206ENST00000463539 NCAPD2Q15021 1401 aa24.72■■□□□ 1.55
CCDC78-206ENST00000463539 FANCIQ9NVI1 1328 aa24.72■■□□□ 1.55
CCDC78-206ENST00000463539 RRP1P56182 461 aaKnown RBP24.72■■□□□ 1.55
CCDC78-206ENST00000463539 THUMPD2Q9BTF0 503 aaKnown RBP24.72■■□□□ 1.55
CCDC78-206ENST00000463539 COL18A1P39060 1754 aa24.71■■□□□ 1.55
CCDC78-206ENST00000463539 FAM83GA6ND36 823 aa24.7■■□□□ 1.55
CCDC78-206ENST00000463539 TSR2Q969E8 191 aaKnown RBP24.7■■□□□ 1.55
CCDC78-206ENST00000463539 ABCA3Q99758 1704 aa24.7■■□□□ 1.55
CCDC78-206ENST00000463539 PIP4K2BP78356 416 aa24.69■■□□□ 1.54
CCDC78-206ENST00000463539 CAMTA1Q9Y6Y1 1673 aa24.69■■□□□ 1.54
CCDC78-206ENST00000463539 CSB-PGBD3P0DP91 1061 aa24.68■■□□□ 1.54
CCDC78-206ENST00000463539 IFT57Q9NWB7 429 aa24.68■■□□□ 1.54
CCDC78-206ENST00000463539 UBAP1LF5GYI3 381 aa24.67■■□□□ 1.54
CCDC78-206ENST00000463539 DCTN1Q14203 1278 aa24.67■■□□□ 1.54
CCDC78-206ENST00000463539 NLRP2Q9NX02 1062 aa24.67■■□□□ 1.54
CCDC78-206ENST00000463539 DLG5Q8TDM6 1919 aa24.66■■□□□ 1.54
CCDC78-206ENST00000463539 GNAI1P63096 354 aa24.66■■□□□ 1.54
CCDC78-206ENST00000463539 RTF1Q92541 710 aaKnown RBP24.66■■□□□ 1.54
CCDC78-206ENST00000463539 LAS1LQ9Y4W2 734 aaKnown RBP24.66■■□□□ 1.54
CCDC78-206ENST00000463539 MCM10Q7L590 875 aa24.65■■□□□ 1.54
CCDC78-206ENST00000463539 LMO7Q8WWI1 1683 aa24.65■■□□□ 1.54
CCDC78-206ENST00000463539 RGPD5Q99666 1765 aa24.65■■□□□ 1.54
CCDC78-206ENST00000463539 RGPD2P0DJD1 1756 aa24.65■■□□□ 1.54
CCDC78-206ENST00000463539 HTATSF1O43719 755 aaKnown RBP24.63■■□□□ 1.53
CCDC78-206ENST00000463539 ERICH6BQ5W0A0 696 aa24.63■■□□□ 1.53
CCDC78-206ENST00000463539 CFAP44Q96MT7 982 aa24.63■■□□□ 1.53
CCDC78-206ENST00000463539 MAP3K5Q99683 1374 aa24.63■■□□□ 1.53
CCDC78-206ENST00000463539 GNAT3A8MTJ3 354 aa24.63■■□□□ 1.53
CCDC78-206ENST00000463539 CT47B1P0C2W7 299 aaPredicted RBP24.63■■□□□ 1.53
CCDC78-206ENST00000463539 ZNF853P0CG23 659 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms