RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 RXRBP28702 533 aa13.7□□□□□ -0.22
GPATCH4-204ENST00000463513 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
GPATCH4-204ENST00000463513 RBM6P78332 1123 aaKnown RBP13.69□□□□□ -0.22
GPATCH4-204ENST00000463513 ARHGEF25Q86VW2 580 aa13.69□□□□□ -0.22
GPATCH4-204ENST00000463513 GLI3P10071 1580 aa13.69□□□□□ -0.22
GPATCH4-204ENST00000463513 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
GPATCH4-204ENST00000463513 A0A0G2JS52 829 aa13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 TNNT2P45379 298 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 AMPHP49418 695 aa13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 MYT1Q01538 1121 aa13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 CNGB1Q14028 1251 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 VPS72Q15906 364 aa13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
GPATCH4-204ENST00000463513 BLMP54132 1417 aaPredicted RBP13.67□□□□□ -0.22
GPATCH4-204ENST00000463513 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
GPATCH4-204ENST00000463513 PEAK1Q9H792 1746 aa13.67□□□□□ -0.22
GPATCH4-204ENST00000463513 MAP3K19Q56UN5 1328 aa13.66□□□□□ -0.22
GPATCH4-204ENST00000463513 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
GPATCH4-204ENST00000463513 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
GPATCH4-204ENST00000463513 CDK12Q9NYV4 1490 aaPredicted RBP13.66□□□□□ -0.22
GPATCH4-204ENST00000463513 RGS12O14924 1447 aa13.65□□□□□ -0.22
GPATCH4-204ENST00000463513 CRB1P82279 1406 aa13.65□□□□□ -0.22
GPATCH4-204ENST00000463513 PPM1GO15355 546 aaPredicted RBP13.65□□□□□ -0.22
GPATCH4-204ENST00000463513 CC2D1BQ5T0F9 858 aaKnown RBP13.65□□□□□ -0.22
GPATCH4-204ENST00000463513 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
GPATCH4-204ENST00000463513 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
GPATCH4-204ENST00000463513 FLT4P35916 1363 aa13.65□□□□□ -0.22
GPATCH4-204ENST00000463513 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
GPATCH4-204ENST00000463513 RGPD2P0DJD1 1756 aa13.64□□□□□ -0.23
GPATCH4-204ENST00000463513 AMER1Q5JTC6 1135 aaPredicted RBP13.64□□□□□ -0.23
GPATCH4-204ENST00000463513 LARP1Q6PKG0 1096 aaKnown RBP13.64□□□□□ -0.23
GPATCH4-204ENST00000463513 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
GPATCH4-204ENST00000463513 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
GPATCH4-204ENST00000463513 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
GPATCH4-204ENST00000463513 KIF24Q5T7B8 1368 aa13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 FBLN1P23142 703 aa13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 HOXC9P31274 260 aa13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 IP6K1Q92551 441 aa13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 LTV1Q96GA3 475 aaPredicted RBP13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 ERBB3P21860 1342 aa13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 SPATA31A1Q5TZJ5 1347 aa13.63□□□□□ -0.23
GPATCH4-204ENST00000463513 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
GPATCH4-204ENST00000463513 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
GPATCH4-204ENST00000463513 ILDR2Q71H61 639 aa13.62□□□□□ -0.23
GPATCH4-204ENST00000463513 ANKRD24Q8TF21 1146 aa13.62□□□□□ -0.23
GPATCH4-204ENST00000463513 EMILIN1Q9Y6C2 1016 aa13.62□□□□□ -0.23
GPATCH4-204ENST00000463513 THSD7AQ9UPZ6 1657 aa13.62□□□□□ -0.23
GPATCH4-204ENST00000463513 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
GPATCH4-204ENST00000463513 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
GPATCH4-204ENST00000463513 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
GPATCH4-204ENST00000463513 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
GPATCH4-204ENST00000463513 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
GPATCH4-204ENST00000463513 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
GPATCH4-204ENST00000463513 INSRP06213 1382 aa13.59□□□□□ -0.23
GPATCH4-204ENST00000463513 EP400Q96L91 3159 aa13.59□□□□□ -0.23
GPATCH4-204ENST00000463513 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
GPATCH4-204ENST00000463513 SEPT12Q8IYM1 358 aa13.58□□□□□ -0.24
GPATCH4-204ENST00000463513 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
GPATCH4-204ENST00000463513 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
GPATCH4-204ENST00000463513 THRAP3Q9Y2W1 955 aaKnown RBP13.58□□□□□ -0.24
GPATCH4-204ENST00000463513 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
GPATCH4-204ENST00000463513 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
GPATCH4-204ENST00000463513 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
GPATCH4-204ENST00000463513 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
GPATCH4-204ENST00000463513 PDE3BQ13370 1112 aa13.53□□□□□ -0.24
GPATCH4-204ENST00000463513 KRT27Q7Z3Y8 459 aa13.53□□□□□ -0.24
GPATCH4-204ENST00000463513 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
GPATCH4-204ENST00000463513 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
GPATCH4-204ENST00000463513 IL2RBP14784 551 aa13.52□□□□□ -0.25
GPATCH4-204ENST00000463513 MTHFSP49914 203 aa13.52□□□□□ -0.25
GPATCH4-204ENST00000463513 DDB1Q16531 1140 aa13.52□□□□□ -0.25
GPATCH4-204ENST00000463513 USHBP1Q8N6Y0 703 aa13.52□□□□□ -0.25
GPATCH4-204ENST00000463513 CFAP53Q96M91 514 aa13.52□□□□□ -0.25
GPATCH4-204ENST00000463513 DISP2A7MBM2 1401 aa13.52□□□□□ -0.25
GPATCH4-204ENST00000463513 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
GPATCH4-204ENST00000463513 EIF4A2Q14240 407 aaKnown RBP13.51□□□□□ -0.25
GPATCH4-204ENST00000463513 RAPGEF4Q8WZA2 1011 aa13.51□□□□□ -0.25
GPATCH4-204ENST00000463513 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
GPATCH4-204ENST00000463513 NBPF6Q5VWK0 638 aa13.5□□□□□ -0.25
GPATCH4-204ENST00000463513 NBPF4Q96M43 638 aa13.5□□□□□ -0.25
GPATCH4-204ENST00000463513 MEGF6O75095 1541 aa13.49□□□□□ -0.25
GPATCH4-204ENST00000463513 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
GPATCH4-204ENST00000463513 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
GPATCH4-204ENST00000463513 SHANK3Q9BYB0 1731 aa13.49□□□□□ -0.25
GPATCH4-204ENST00000463513 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
GPATCH4-204ENST00000463513 EXOC5O00471 708 aa13.48□□□□□ -0.25
GPATCH4-204ENST00000463513 SOCS7O14512 581 aa13.48□□□□□ -0.25
GPATCH4-204ENST00000463513 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
GPATCH4-204ENST00000463513 TATP17735 454 aaPredicted RBP13.48□□□□□ -0.25
GPATCH4-204ENST00000463513 RALBP1Q15311 655 aa13.48□□□□□ -0.25
GPATCH4-204ENST00000463513 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
GPATCH4-204ENST00000463513 EYA1Q99502 592 aa13.47□□□□□ -0.25
GPATCH4-204ENST00000463513 SBF2Q86WG5 1849 aa13.47□□□□□ -0.25
GPATCH4-204ENST00000463513 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
GPATCH4-204ENST00000463513 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
GPATCH4-204ENST00000463513 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.25
GPATCH4-204ENST00000463513 FAM182BQ5T319 152 aa13.46□□□□□ -0.25
GPATCH4-204ENST00000463513 MYBBP1AQ9BQG0 1328 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms