RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CDCA7Q9BWT1 371 aaPredicted RBP9.79□□□□□ -0.84
EPHA4-210ENST00000463446 KIF20BQ96Q89 1820 aa9.79□□□□□ -0.84
EPHA4-210ENST00000463446 NHSL1Q5SYE7 1610 aa9.78□□□□□ -0.84
EPHA4-210ENST00000463446 ZBTB7CA1YPR0 619 aa9.78□□□□□ -0.84
EPHA4-210ENST00000463446 AMOTQ4VCS5 1084 aa9.78□□□□□ -0.84
EPHA4-210ENST00000463446 MEX3CQ5U5Q3 659 aaKnown RBP9.78□□□□□ -0.84
EPHA4-210ENST00000463446 RUNDC1Q96C34 613 aa9.78□□□□□ -0.84
EPHA4-210ENST00000463446 NGLY1Q96IV0 654 aa9.78□□□□□ -0.84
EPHA4-210ENST00000463446 EMILIN1Q9Y6C2 1016 aa9.78□□□□□ -0.84
EPHA4-210ENST00000463446 MAPK8IP3Q9UPT6 1336 aa9.78□□□□□ -0.84
EPHA4-210ENST00000463446 ABCC6O95255 1503 aa9.77□□□□□ -0.84
EPHA4-210ENST00000463446 PLEKHG2Q9H7P9 1386 aa9.77□□□□□ -0.84
EPHA4-210ENST00000463446 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 NRKQ7Z2Y5 1582 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 HSPA1LP34931 641 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 IL13P35225 146 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 CALD1Q05682 793 aaKnown RBP9.77□□□□□ -0.85
EPHA4-210ENST00000463446 LMOD3Q0VAK6 560 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 HSP90AB2PQ58FF8 381 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.85
EPHA4-210ENST00000463446 THRAP3Q9Y2W1 955 aaKnown RBP9.77□□□□□ -0.85
EPHA4-210ENST00000463446 CDK12Q9NYV4 1490 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-210ENST00000463446 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
EPHA4-210ENST00000463446 TRPM3Q9HCF6 1732 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-210ENST00000463446 FAM83GA6ND36 823 aa9.76□□□□□ -0.85
EPHA4-210ENST00000463446 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-210ENST00000463446 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-210ENST00000463446 EIF4A2Q14240 407 aaKnown RBP9.76□□□□□ -0.85
EPHA4-210ENST00000463446 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-210ENST00000463446 ANKRD24Q8TF21 1146 aa9.76□□□□□ -0.85
EPHA4-210ENST00000463446 RAPGEF4Q8WZA2 1011 aa9.76□□□□□ -0.85
EPHA4-210ENST00000463446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.76□□□□□ -0.85
EPHA4-210ENST00000463446 USP54Q70EL1 1684 aa9.76□□□□□ -0.85
EPHA4-210ENST00000463446 SLIT3O75094 1523 aa9.76□□□□□ -0.85
EPHA4-210ENST00000463446 ALS2Q96Q42 1657 aa9.75□□□□□ -0.85
EPHA4-210ENST00000463446 HTATSF1O43719 755 aaKnown RBP9.75□□□□□ -0.85
EPHA4-210ENST00000463446 PLEKHG5O94827 1062 aa9.75□□□□□ -0.85
EPHA4-210ENST00000463446 PDE3BQ13370 1112 aa9.75□□□□□ -0.85
EPHA4-210ENST00000463446 PLEKHO1Q53GL0 409 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-210ENST00000463446 TOM1L2Q6ZVM7 507 aa9.75□□□□□ -0.85
EPHA4-210ENST00000463446 NLRP2Q9NX02 1062 aa9.75□□□□□ -0.85
EPHA4-210ENST00000463446 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-210ENST00000463446 KIAA0232Q92628 1395 aa9.75□□□□□ -0.85
EPHA4-210ENST00000463446 PIK3C2AO00443 1686 aa9.74□□□□□ -0.85
EPHA4-210ENST00000463446 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
EPHA4-210ENST00000463446 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
EPHA4-210ENST00000463446 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
EPHA4-210ENST00000463446 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
EPHA4-210ENST00000463446 CHMP4AQ9BY43 222 aa9.74□□□□□ -0.85
EPHA4-210ENST00000463446 BTG4Q9NY30 223 aa9.74□□□□□ -0.85
EPHA4-210ENST00000463446 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
EPHA4-210ENST00000463446 MAP2P11137 1827 aaKnown RBP9.74□□□□□ -0.85
EPHA4-210ENST00000463446 ADAMTS2O95450 1211 aa9.73□□□□□ -0.85
EPHA4-210ENST00000463446 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
EPHA4-210ENST00000463446 TATP17735 454 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-210ENST00000463446 FBLN1P23142 703 aa9.73□□□□□ -0.85
EPHA4-210ENST00000463446 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
EPHA4-210ENST00000463446 SULT6B1Q6IMI4 303 aa9.73□□□□□ -0.85
EPHA4-210ENST00000463446 UNC5CLQ8IV45 518 aa9.73□□□□□ -0.85
EPHA4-210ENST00000463446 FNBP4Q8N3X1 1017 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-210ENST00000463446 LTV1Q96GA3 475 aaPredicted RBP9.73□□□□□ -0.85
EPHA4-210ENST00000463446 EYA1Q99502 592 aa9.73□□□□□ -0.85
EPHA4-210ENST00000463446 ERBB3P21860 1342 aa9.73□□□□□ -0.85
EPHA4-210ENST00000463446 WDR17Q8IZU2 1322 aa9.73□□□□□ -0.85
EPHA4-210ENST00000463446 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
EPHA4-210ENST00000463446 CCDC27Q2M243 656 aa9.72□□□□□ -0.85
EPHA4-210ENST00000463446 RTF1Q92541 710 aaKnown RBP9.72□□□□□ -0.85
EPHA4-210ENST00000463446 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
EPHA4-210ENST00000463446 IGSF1Q8N6C5 1336 aa9.72□□□□□ -0.85
EPHA4-210ENST00000463446 COL22A1Q8NFW1 1626 aaPredicted RBP9.71□□□□□ -0.85
EPHA4-210ENST00000463446 CENPBP07199 599 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-210ENST00000463446 C1orf141Q5JVX7 400 aa9.71□□□□□ -0.86
EPHA4-210ENST00000463446 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
EPHA4-210ENST00000463446 STRN4Q9NRL3 753 aa9.71□□□□□ -0.86
EPHA4-210ENST00000463446 NFAT5O94916 1531 aa9.71□□□□□ -0.86
EPHA4-210ENST00000463446 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-210ENST00000463446 EXOC5O00471 708 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 IL2RBP14784 551 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 PRKAR2BP31323 418 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 HNRNPUQ00839 825 aaKnown RBP eCLIP9.7□□□□□ -0.86
EPHA4-210ENST00000463446 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 NBPF6Q5VWK0 638 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 WDR63Q8IWG1 891 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 NBPF4Q96M43 638 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 C8orf37Q96NL8 207 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 USP21Q9UK80 565 aa9.7□□□□□ -0.86
EPHA4-210ENST00000463446 TRPC5Q9UL62 973 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-210ENST00000463446 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
EPHA4-210ENST00000463446 PHRF1Q9P1Y6 1649 aaKnown RBP9.7□□□□□ -0.86
EPHA4-210ENST00000463446 KDRP35968 1356 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 RIPK4P57078 832 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 VPS72Q15906 364 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 BARGINQ6ZT62 677 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 PLEKHF1Q96S99 279 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 BABAM1Q9NWV8 329 aa9.69□□□□□ -0.86
EPHA4-210ENST00000463446 CRB1P82279 1406 aa9.68□□□□□ -0.86
EPHA4-210ENST00000463446 GNAT3A8MTJ3 354 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms