RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 EVA1CP58658 441 aa6.87□□□□□ -1.31
TRA2B-207ENST00000463328 CALR3Q96L12 384 aaKnown RBP6.87□□□□□ -1.31
TRA2B-207ENST00000463328 INO80Q9ULG1 1556 aaPredicted RBP6.87□□□□□ -1.31
TRA2B-207ENST00000463328 TRAPPC8Q9Y2L5 1435 aa6.87□□□□□ -1.31
TRA2B-207ENST00000463328 hCG_2014768A0A024R1R8 64 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 TTC36A6NLP5 189 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 ZNF500O60304 480 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-207ENST00000463328 RECKO95980 971 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 CACTIN-AS1Q8N1I8 211 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 KCNB2Q92953 911 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 NRBP1Q9UHY1 535 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 ROCK2O75116 1388 aaKnown RBP6.86□□□□□ -1.31
TRA2B-207ENST00000463328 ADGRL1O94910 1474 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 PLA2R1Q13018 1463 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 NEO1Q92859 1461 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 VWDEQ8N2E2 1590 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 SCAPERQ9BY12 1400 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 MMP14P50281 582 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 NBPF11Q86T75 865 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 KANK1Q14678 1352 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 ZFYVE16Q7Z3T8 1539 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 IGBP1P78318 339 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 SF3A1Q15459 793 aaKnown RBP6.86□□□□□ -1.31
TRA2B-207ENST00000463328 SMYD5Q6GMV2 418 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 GLMNQ92990 594 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 GPRASP1Q5JY77 1395 aa6.86□□□□□ -1.31
TRA2B-207ENST00000463328 ZNF518AQ6AHZ1 1483 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 TRPM1Q7Z4N2 1603 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 TMEM88BA6NKF7 163 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 WDHD1O75717 1129 aaPredicted RBP6.85□□□□□ -1.31
TRA2B-207ENST00000463328 PCMTD1Q96MG8 357 aaPredicted RBP6.85□□□□□ -1.31
TRA2B-207ENST00000463328 PIF1Q9H611 641 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 PRR12Q9ULL5 1215 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 DHX29Q7Z478 1369 aaKnown RBP6.85□□□□□ -1.31
TRA2B-207ENST00000463328 TLDC2A0PJX2 215 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 NBPF1Q3BBV0 1214 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 ZNF280DQ6N043 979 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 ARHGEF10LQ9HCE6 1279 aa6.85□□□□□ -1.31
TRA2B-207ENST00000463328 CCDC144AA2RUR9 1427 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 PTPRTO14522 1441 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.84□□□□□ -1.31
TRA2B-207ENST00000463328 CCDC189A1A4V9 331 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 C11orf95C9JLR9 678 aaPredicted RBP6.84□□□□□ -1.31
TRA2B-207ENST00000463328 DHX16O60231 1041 aaKnown RBP6.84□□□□□ -1.31
TRA2B-207ENST00000463328 CSB-PGBD3P0DP91 1061 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 CREBRFQ8IUR6 639 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 VRTNQ9H8Y1 702 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 SNRKQ9NRH2 765 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 GLI2P10070 1586 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 RPGRIP1LQ68CZ1 1315 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 BCORL1Q5H9F3 1711 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 KTN1Q86UP2 1357 aaKnown RBP6.84□□□□□ -1.31
TRA2B-207ENST00000463328 USP47Q96K76 1375 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 PRDM15P57071 1507 aaPredicted RBP6.84□□□□□ -1.31
TRA2B-207ENST00000463328 TET3O43151 1660 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 EIF3JO75822 258 aaKnown RBP6.84□□□□□ -1.31
TRA2B-207ENST00000463328 PDE6BP35913 854 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 TCEAL1Q15170 157 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 NPAS4Q8IUM7 802 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 G3BP2Q9UN86 482 aaKnown RBP6.84□□□□□ -1.31
TRA2B-207ENST00000463328 TBX22Q9Y458 520 aa6.84□□□□□ -1.31
TRA2B-207ENST00000463328 KIF7Q2M1P5 1343 aa6.84□□□□□ -1.32
TRA2B-207ENST00000463328 ATP7AQ04656 1500 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 PRAG1Q86YV5 1406 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 CFAP69A5D8W1 941 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 GPR37O15354 613 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 CCDC146Q8IYE0 955 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 AFAP1Q8N556 730 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 TMX4Q9H1E5 349 aaPredicted RBP6.83□□□□□ -1.32
TRA2B-207ENST00000463328 TMA7Q9Y2S6 64 aaKnown RBP6.83□□□□□ -1.32
TRA2B-207ENST00000463328 MLH3Q9UHC1 1453 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 GOLGA6CA6NDK9 693 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 GOLGA6BA6NDN3 693 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 GOLGA6DP0CG33 693 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 MS4A1P11836 297 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 WDR78Q5VTH9 848 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 SDE2Q6IQ49 451 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 ATL2Q8NHH9 583 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 CXorf38Q8TB03 319 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.83□□□□□ -1.322e-9■■□□□ 11.4
TRA2B-207ENST00000463328 GOLGA6AQ9NYA3 693 aa6.83□□□□□ -1.32
TRA2B-207ENST00000463328 GNEQ9Y223 722 aaKnown RBP6.83□□□□□ -1.32
TRA2B-207ENST00000463328 LMTK3Q96Q04 1460 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 NOP9Q86U38 636 aaKnown RBP6.82□□□□□ -1.32
TRA2B-207ENST00000463328 PRKRIP1Q9H875 184 aaPredicted RBP6.82□□□□□ -1.32
TRA2B-207ENST00000463328 RYDENQ9NUL5 291 aaKnown RBP6.82□□□□□ -1.32
TRA2B-207ENST00000463328 COMMD10Q9Y6G5 202 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 TRPM2O94759 1503 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 LMTK2Q8IWU2 1503 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 E9PCH4 1651 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 CEP152O94986 1710 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 C7P10643 843 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 PDAP1Q13442 181 aaKnown RBP6.82□□□□□ -1.32
TRA2B-207ENST00000463328 CCDC144BQ3MJ40 725 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 RTL5Q5HYW3 569 aaPredicted RBP6.82□□□□□ -1.32
TRA2B-207ENST00000463328 CFAP70Q5T0N1 1121 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 OXER1Q8TDS5 423 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 TSPAN18Q96SJ8 248 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 POGZQ7Z3K3 1410 aa6.82□□□□□ -1.32
TRA2B-207ENST00000463328 KIAA1210Q9ULL0 1709 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms