RNA–Protein interactions for RNA: ENST00000463143.5

DUBR-201, DPPA2 upstream binding RNA, humanhuman

TSL 3

Gene DUBR, Length 801 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-201ENST00000463143 IQSEC2Q5JU85 1478 aa12.14□□□□□ -0.47
DUBR-201ENST00000463143 SENP3-EIF4A1A0A087X0R7 540 aa12.13□□□□□ -0.47
DUBR-201ENST00000463143 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
DUBR-201ENST00000463143 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
DUBR-201ENST00000463143 FCHSD2O94868 740 aa12.12□□□□□ -0.47
DUBR-201ENST00000463143 NEFMP07197 916 aa12.12□□□□□ -0.47
DUBR-201ENST00000463143 LTV1Q96GA3 475 aaPredicted RBP12.12□□□□□ -0.47
DUBR-201ENST00000463143 SALL2Q9Y467 1007 aaPredicted RBP12.12□□□□□ -0.47
DUBR-201ENST00000463143 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
DUBR-201ENST00000463143 COL3A1P02461 1466 aaPredicted RBP12.11□□□□□ -0.47
DUBR-201ENST00000463143 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
DUBR-201ENST00000463143 APAF1O14727 1248 aa12.1□□□□□ -0.47
DUBR-201ENST00000463143 HMOX1P09601 288 aa12.1□□□□□ -0.47
DUBR-201ENST00000463143 SLIT3O75094 1523 aa12.1□□□□□ -0.47
DUBR-201ENST00000463143 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
DUBR-201ENST00000463143 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
DUBR-201ENST00000463143 SULT6B1Q6IMI4 303 aa12.09□□□□□ -0.47
DUBR-201ENST00000463143 PRDM11Q9NQV5 511 aa12.09□□□□□ -0.47
DUBR-201ENST00000463143 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
DUBR-201ENST00000463143 ZBED9Q6R2W3 1325 aa12.09□□□□□ -0.47
DUBR-201ENST00000463143 NFAT5O94916 1531 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 PRKAR2BP31323 418 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 TCP11L2Q8N4U5 519 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 NGEFQ8N5V2 710 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
DUBR-201ENST00000463143 KIAA0232Q92628 1395 aa12.07□□□□□ -0.48
DUBR-201ENST00000463143 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
DUBR-201ENST00000463143 ALS2Q96Q42 1657 aa12.07□□□□□ -0.48
DUBR-201ENST00000463143 MED1Q15648 1581 aaPredicted RBP12.07□□□□□ -0.48
DUBR-201ENST00000463143 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
DUBR-201ENST00000463143 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
DUBR-201ENST00000463143 EYA1Q99502 592 aa12.07□□□□□ -0.48
DUBR-201ENST00000463143 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
DUBR-201ENST00000463143 AHDC1Q5TGY3 1603 aaPredicted RBP12.07□□□□□ -0.48
DUBR-201ENST00000463143 CPDO75976 1380 aa12.06□□□□□ -0.48
DUBR-201ENST00000463143 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
DUBR-201ENST00000463143 MAP2P11137 1827 aaKnown RBP12.06□□□□□ -0.48
DUBR-201ENST00000463143 EVA1CP58658 441 aa12.05□□□□□ -0.48
DUBR-201ENST00000463143 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
DUBR-201ENST00000463143 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
DUBR-201ENST00000463143 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
DUBR-201ENST00000463143 PEAK1Q9H792 1746 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 MARF1Q9Y4F3 1742 aaKnown RBP12.04□□□□□ -0.48
DUBR-201ENST00000463143 FAM83GA6ND36 823 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
DUBR-201ENST00000463143 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
DUBR-201ENST00000463143 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
DUBR-201ENST00000463143 RIPK4P57078 832 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 NBPF6Q5VWK0 638 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
DUBR-201ENST00000463143 PHACTR3Q96KR7 559 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 NBPF4Q96M43 638 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
DUBR-201ENST00000463143 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
DUBR-201ENST00000463143 SHPRHQ149N8 1683 aa12.03□□□□□ -0.48
DUBR-201ENST00000463143 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
DUBR-201ENST00000463143 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
DUBR-201ENST00000463143 ERBB3P21860 1342 aa12.02□□□□□ -0.49
DUBR-201ENST00000463143 HSPA1LP34931 641 aa12.01□□□□□ -0.49
DUBR-201ENST00000463143 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
DUBR-201ENST00000463143 CCDC27Q2M243 656 aa12.01□□□□□ -0.49
DUBR-201ENST00000463143 WWC1Q8IX03 1113 aa12.01□□□□□ -0.49
DUBR-201ENST00000463143 STRN4Q9NRL3 753 aa12.01□□□□□ -0.49
DUBR-201ENST00000463143 JCADQ9P266 1359 aa12.01□□□□□ -0.49
DUBR-201ENST00000463143 PHLPP1O60346 1717 aa12□□□□□ -0.49
DUBR-201ENST00000463143 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
DUBR-201ENST00000463143 BTG4Q9NY30 223 aa12□□□□□ -0.49
DUBR-201ENST00000463143 KDRP35968 1356 aa12□□□□□ -0.49
DUBR-201ENST00000463143 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
DUBR-201ENST00000463143 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
DUBR-201ENST00000463143 RAPGEF4Q8WZA2 1011 aa11.99□□□□□ -0.49
DUBR-201ENST00000463143 PHRF1Q9P1Y6 1649 aaKnown RBP11.99□□□□□ -0.49
DUBR-201ENST00000463143 COL16A1Q07092 1604 aaPredicted RBP11.98□□□□□ -0.49
DUBR-201ENST00000463143 WDR17Q8IZU2 1322 aa11.98□□□□□ -0.49
DUBR-201ENST00000463143 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
DUBR-201ENST00000463143 MTHFSDQ2M296 383 aaKnown RBP11.98□□□□□ -0.49
DUBR-201ENST00000463143 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
DUBR-201ENST00000463143 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
DUBR-201ENST00000463143 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
DUBR-201ENST00000463143 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
DUBR-201ENST00000463143 SPATA31A6Q5VVP1 1343 aa11.97□□□□□ -0.49
DUBR-201ENST00000463143 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
DUBR-201ENST00000463143 CALD1Q05682 793 aaKnown RBP11.97□□□□□ -0.49
DUBR-201ENST00000463143 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
DUBR-201ENST00000463143 LARP1Q6PKG0 1096 aaKnown RBP11.97□□□□□ -0.49
DUBR-201ENST00000463143 RTF1Q92541 710 aaKnown RBP11.97□□□□□ -0.49
DUBR-201ENST00000463143 LTN1O94822 1766 aa11.97□□□□□ -0.49
DUBR-201ENST00000463143 ABCC6O95255 1503 aa11.96□□□□□ -0.49
DUBR-201ENST00000463143 E9PSI1 815 aa11.96□□□□□ -0.49
DUBR-201ENST00000463143 SLFN5Q08AF3 891 aa11.96□□□□□ -0.49
DUBR-201ENST00000463143 NGLY1Q96IV0 654 aa11.96□□□□□ -0.49
DUBR-201ENST00000463143 CARD10Q9BWT7 1032 aa11.96□□□□□ -0.49
DUBR-201ENST00000463143 CAMTA1Q9Y6Y1 1673 aa11.95□□□□□ -0.5
DUBR-201ENST00000463143 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
DUBR-201ENST00000463143 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
DUBR-201ENST00000463143 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms